DY271178

Overview
NameDY271178
Unique NameDY271178
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1058
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: DST4_DICDI (Serine/threonine-protein kinase dst4 OS=Dictyostelium discoideum GN=dst4 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.245e-20
Identity = 74/211 (35.07%), Postives = 107/211 (50.71%), Query Frame = 3
Query:   45 IGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRS-LSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVR--RECQGPES--DVWSLGCTNIEKGYGKP 662
            IG+GSFG V   ++  N +V A+K ++        M   +   L+ EI IL++ +  PYIVKY G  +         +   + +EY  GG++ D+    +    E  + +  Y IV  L YLHS  I+H D+K  NVLV       KLADFG +  A + +T   +    GSP WM+PEV+   +   G +S  D+WSLG T IE    KP
Sbjct:   27 IGQGSFGVVCTCINTVNNEVVAIKFLE--------MEGEENSSLKKEITILKNTVRCPYIVKYHGCYIK-------ENNLMIVMEYCDGGSILDIMQMCSITLTEAQIAAILYQIVEGLVYLHSNKILHRDIKAGNVLVNKLGQ-AKLADFGVS--AILVNTGFKQKTVVGSPYWMSPEVISPPKGSNGYDSKADIWSLGITAIEMAESKP 219          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: MYO3B_MOUSE (Myosin-IIIb OS=Mus musculus GN=Myo3b PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 3.829e-20
Identity = 85/258 (32.95%), Postives = 125/258 (48.45%), Query Frame = 3
Query:   18 MVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSS-PYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTL---NAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRRECQGPES-----DVWSLGCTNIEKGYGKPRWEDFRANTLNPTRFPQYLPRFP----IQPSNSC 752
            M +W   + IG+G++G V    ++ +G + AVK +D  + +         E +E E  IL+ L S P +VK+ G  + Y+A         L LE   GG+V++L   L       DE  +    Y  +  L++LH   I+H DVKG N+L+      VKL DFG + + T   TR  +    G+P WMAPEV+  E Q   S     DVWSLG T IE G G P   +     ++P +    +PR P    + P + C
Sbjct:   12 METWEIIETIGKGTYGKVYKVANKRDGSLAAVKVLDPVSDM--------DEEIEAEYNILQFLPSHPNVVKFYG--MFYKADRCVGGQLWLVLELCNGGSVTELVKGLLRCGKRLDEAVISYILYGALLGLQHLHCHRIIHRDVKGNNILLTTEGG-VKLVDFGVSAQLT--STRLRRNTSVGTPFWMAPEVIACEQQYDSSYDARCDVWSLGITAIELGDGDPPLFE-----MHPVKMLFKIPRNPPPTLLHPDSWC 251          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: STK4L_DICDI (Serine/threonine-protein kinase 4 homolog B OS=Dictyostelium discoideum GN=krsB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.114e-19
Identity = 70/228 (30.70%), Postives = 113/228 (49.56%), Query Frame = 3
Query:   39 KCIGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRRECQGPESDVWSLGCTNIEKGYGKPRWEDFRANTLNPTRFPQYLP 722
            +C+GRGSFG+V  A  +  G++ AVK V  N            + +  EI I++   S Y+V+Y G+    E      +C  + +EY   G+VSD+    N   +E  +    Y  +  L YLH  + +H D+K  N+LV       KLADFG +G+  +S+    +    G+P ++APEV++      ++D+W+LG + IE     P + D     L+P R    +P
Sbjct:   27 ECLGRGSFGSVYKATYKKTGNIVAVKLVPINEDF---------QEILKEINIMKQCKSKYVVQYYGNYFKDE------TCWII-MEYCAFGSVSDMMNITNRVLNEEQIALVCYSTLKGLYYLHRNSKIHRDIKPGNILVSEEGE-CKLADFGVSGQ--LSERTRKRNTVIGTPFFLAPEVIQEVGYDNKADIWALGISAIEMAEFHPPYHD-----LHPMRVLFMIP 230          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: SSK22_YEAST (Serine/threonine-protein kinase SSK22 OS=Saccharomyces cerevisiae GN=SSK22 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 1.114e-19
Identity = 67/235 (28.51%), Postives = 112/235 (47.66%), Query Frame = 3
Query:   27 WVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQA--ECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVK--------------IQPRGSPLWMAPEVVRRECQGPE---SDVWSLGCTNIEKGYGKPRWED 674
            W +   IG G+FG V  A++  NG++ AVK +       H    ++     ++ E+ +L  L+ P IV+Y G +V  +         N+ +EY  GG+++ L        DE+  + +T+ ++  L YLH   +VH D+K +N+L+  N   +K  DFG A     S TR V+               +  G+P++MAPE +       +    DVW+LGC  +E   G+  W +
Sbjct: 1034 WQKRSFIGGGTFGQVYSAINLENGEILAVKEIK-----IHDTTTMKKIFPLIKEEMTVLEMLNHPNIVQYYGVEVHRDKV-------NIFMEYCEGGSLASLLDH-GRIEDEMVTQVYTFELLEGLAYLHQSGVVHRDIKPENILLDFN-GIIKYVDFGTARTVVGSRTRTVRNAAVQDFGVETKSLNEMMGTPMYMAPETISGSAVKGKLGADDVWALGCVVLEMATGRRPWSN 1254          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: Y0146_DICDI (Probable serine/threonine-protein kinase DDB_G0270146 OS=Dictyostelium discoideum GN=DDB_G0270146 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.455e-19
Identity = 64/218 (29.36%), Postives = 107/218 (49.08%), Query Frame = 3
Query:   45 IGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRRECQGPESDVWSLGCTNIEKGYGKPRWEDFRANTLNP 698
            IG+G+F TV   ++  +GD  A+K  +++      +   Q   +  E  IL+ L+   IV+ LG +        + +   + LEY+  G++S +      + + + + ++   ++  L YLH   ++H D+K  N+L+   +   KL+DFG AGE      +   +   G+P WMAPEV+        SD+WSLGCT IE     P + D     LNP
Sbjct:   83 IGKGAFATVFKGLNTLSGDFVAIKRFEKSK-----ISNEQHSSVSTEFDILQRLNHENIVRILGRE-------ENENYIYIFLEYMENGSLSTILNNFGTFPESL-ICNYVENVLKGLVYLHQEGVIHRDIKAANILIN-KAGEAKLSDFGTAGEIIKESDKRYSVV--GTPYWMAPEVIEISGHCQVSDIWSLGCTIIELFTSYPPYFD-----LNP 279          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: PAKF_DICDI (Serine/threonine-protein kinase pakF OS=Dictyostelium discoideum GN=pakF PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.455e-19
Identity = 70/229 (30.57%), Postives = 114/229 (49.78%), Query Frame = 3
Query:   45 IGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRRECQGPESDVWSLGCTNIEKGYGKPRWEDFRANTLNPTRFPQYLPRFP 731
            +G G++G+V     +  G   A+K ++        M   ++  L+NEI IL++  SP IV Y G          + S   + L++   G++ D+  +     +E  +       +  L YLHS+NI+H DVK  NVL+      VK+ADFG + +   +  +  ++   G+PLWMAPEV+ ++    ++D+WSLG T IE   G P   D     L P R  + +P +P
Sbjct:  400 LGDGAYGSVYKGTHKDLGFTLAIKVIE--------MKESESVSLQNEINILKNCKSPNIVSYFGS-------LQTESHIWILLDFCALGSIRDIIESTEKTLNEAQISFVVKNTLKGLIYLHSQNIIHRDVKAANVLLSEGCD-VKIADFGVSEKLNGALDQSKEMI--GTPLWMAPEVILKKNYDYKADIWSLGITIIEMADGLPPHID-----LPPMRAMKMVPNWP 605          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: MYO3B_HUMAN (Myosin-IIIb OS=Homo sapiens GN=MYO3B PE=2 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 1.455e-19
Identity = 82/245 (33.47%), Postives = 121/245 (49.39%), Query Frame = 3
Query:   24 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSS-PYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTL---NAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRRECQGPES-----DVWSLGCTNIEKGYGKPRWEDFRANTLNPTRFPQYLPRFP 731
            +W   + IG+G++G V    ++ +G + AVK +D  + +         E +E E  IL+ L + P +VK+ G  + Y+A         L LE   GG+V++L   L       DE  +    Y  +  L++LH+  I+H DVKG N+L+      VKL DFG + + T   TR  +    G+P WMAPEV+  E Q   S     DVWSLG T IE G G P   D     ++P +    +PR P
Sbjct:   26 TWEIIETIGKGTYGKVYKVTNKRDGSLAAVKILDPVSDM--------DEEIEAEYNILQFLPNHPNVVKFYG--MFYKADHCVGGQLWLVLELCNGGSVTELVKGLLRCGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGG-VKLVDFGVSAQLT--STRLRRNTSVGTPFWMAPEVIACEQQYDSSYDARCDVWSLGITAIELGDGDPPLFD-----MHPVKTLFKIPRNP 252          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: PAK1_CAEEL (Serine/threonine-protein kinase pak-1 OS=Caenorhabditis elegans GN=pak-1 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.900e-19
Identity = 71/208 (34.13%), Postives = 109/208 (52.40%), Query Frame = 3
Query:   45 IGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLH--LEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRRECQGPESDVWSLGCTNIEKGYGKP 662
            IG G+ G+V  A++       A+K ++            + E + NEI ++R      IV YL    SY        C  L   +EYL GG+++D+ T      ++  + +    ++ AL++LHSR+++H D+K  N+L+G + S VKL DFG    A +S  +  +    G+P WMAPEVV R+  GP+ DVWSLG   IE   G+P
Sbjct:  301 IGSGASGSVYTAIEISTEAEVAIKQMNLK-------DQPKKELIINEILVMRENKHANIVNYLD---SYLV------CDELWVVMEYLAGGSLTDVVT--ECQMEDGIIAAVCREVLQALEFLHSRHVIHRDIKSDNILLGMDGS-VKLTDFGFC--AQLSPEQRKRTTMVGTPYWMAPEVVTRKQYGPKVDVWSLGIMAIEMVEGEP 487          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: MYO3A_HUMAN (Myosin-IIIa OS=Homo sapiens GN=MYO3A PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 2.482e-19
Identity = 80/245 (32.65%), Postives = 119/245 (48.57%), Query Frame = 3
Query:   24 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSS-PYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSAL---KYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRRECQ-----GPESDVWSLGCTNIEKGYGKPRWEDFRANTLNPTRFPQYLPRFP 731
            +W   + IG+G++G V   +++ NG   AVK +D      H +     E +E E  IL++LS  P +V++ G  + ++    +     L LE   GG+V+DL        + ++     Y +  AL   ++LH+   +H DVKG N+L+      VKL DFG + + T   TR  +    G+P WMAPEV+  E Q         D WSLG T IE G G P   D     L+P R    +PR P
Sbjct:   20 TWEITETIGKGTYGKVFKVLNKKNGQKAAVKILDP----IHDID----EEIEAEYNILKALSDHPNVVRFYG--IYFKKDKVNGDKLWLVLELCSGGSVTDLVKGFLKRGERMSEPLIAYILHEALMGLQHLHNNKTIHRDVKGNNILLTTEGG-VKLVDFGVSAQLT--STRHRRNTSVGTPFWMAPEVIACEQQLDTTYDARCDTWSLGITAIELGDGDPPLAD-----LHPMRALFKIPRNP 246          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: M3K15_HUMAN (Mitogen-activated protein kinase kinase kinase 15 OS=Homo sapiens GN=MAP3K15 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 5.530e-19
Identity = 68/216 (31.48%), Postives = 106/216 (49.07%), Query Frame = 3
Query:   45 IGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGA----AGEATVSDTRGVKIQPRGSPLWMAPEVVRR--ECQGPESDVWSLGCTNIEKGYGKPRWED 674
            +G+G++G V    D  N    A+K +    +         ++ L  EI + + L    IV+YLG         + +    + +E +PGG++S L  +      E T++ +T  I+  LKYLH   IVH D+KG NVLV   S  VK++DFG     AG    ++T        G+  +MAPE++ +     G  +D+WSLGCT IE    KP + +
Sbjct:  658 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSR-------YSQPLHEEIALHKYLKHRNIVQYLGS-------VSENGYIKIFMEQVPGGSLSALLRSKWGPMKEPTIKFYTKQILEGLKYLHENQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGVNPCTETF------TGTLQYMAPEIIDQGPRGYGAPADIWSLGCTIIEMATSKPPFHE 853          
The following BLAST results are available for this feature:
BLAST of DY271178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DST4_DICDI2.245e-2035.07Serine/threonine-protein kinase dst4 OS=Dictyostel... [more]
MYO3B_MOUSE3.829e-2032.95Myosin-IIIb OS=Mus musculus GN=Myo3b PE=2 SV=2[more]
STK4L_DICDI1.114e-1930.70Serine/threonine-protein kinase 4 homolog B OS=Dic... [more]
SSK22_YEAST1.114e-1928.51Serine/threonine-protein kinase SSK22 OS=Saccharom... [more]
Y0146_DICDI1.455e-1929.36Probable serine/threonine-protein kinase DDB_G0270... [more]
PAKF_DICDI1.455e-1930.57Serine/threonine-protein kinase pakF OS=Dictyostel... [more]
MYO3B_HUMAN1.455e-1933.47Myosin-IIIb OS=Homo sapiens GN=MYO3B PE=2 SV=3[more]
PAK1_CAEEL1.900e-1934.13Serine/threonine-protein kinase pak-1 OS=Caenorhab... [more]
MYO3A_HUMAN2.482e-1932.65Myosin-IIIa OS=Homo sapiens GN=MYO3A PE=1 SV=2[more]
M3K15_HUMAN5.530e-1931.48Mitogen-activated protein kinase kinase kinase 15 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YB14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271178 ID=DY271178; Name=DY271178; organism=Citrus clementina; type=EST; length=1058bp
GCATTTATTAAAAAAAAATGGTTTCTTGGGTGAGAGGCAAGTGCATAGGC
AGAGGCTCCTTTGGAACCGTCAACGTGGCCGTCGACAGATTCAACGGCGA
CGTTTTTGCGGTGAAATCAGTTGATCGAAACGCCGCGTTGTGTCACCATA
TGCCAGCAATTCAAGCCGAGTGTTTAGAAAACGAAATCAGAATTCTCCGC
TCACTCTCCTCCCCTTACATTGTCAAGTACCTCGGCGACGACGTGTCATA
CGAGGCCCCCACGACGTCGTCCTCGTGCCGGAACCTCCACCTAGAGTACT
TGCCAGGCGGCACCGTCTCCGACCTGGCAACAACTCTTAATGCTTACGCG
GACGAGATCACCTTGCGTTCACACACGTACTGTATTGTCTCTGCGTTGAA
GTACTTGCATTCTAGGAACATCGTACACTGCGACGTCAAAGGCAAGAACG
TACTAGTGGGTCCCAATTCGAGTTTCGTTAAACTCGCCGATTTCGGCGCA
GCGGGTGAGGCGACGGTTTCTGACACACGGGGTGTCAAGATTCAGCCGCG
TGGAAGTCCTCTATGGATGGCGCCCGAGGTCGTACGAAGGGAGTGTCAGG
GACCGGAGAGTGATGTCTGGTCTTTGGGATGTACCAATATCGAGAAGGGT
TACGGAAAACCCCGCTGGGAAGATTTCCGTGCCAACACCCTGAATCCAAC
CCGATTCCCCCAATATTTGCCCCGGTTTCCCATTCAGCCTTCGAACTCGT
GCTGGATTTTCTTGAAAATTGTTTGAAAAAGGGACCGGGGGAGGCCGGGG
AACTGGAACACCCCCCCAAAACTTCCCTTTTTAACAATCGGGGTCCCCCA
ACGGAGGCAAAAAAGCCGCGGAACCCCCCCCCCGGGCGCTGCCCCGGGGC
CACATCCCAAATCCAGAAAAAAAGGGAACAATGGAATAACAATAAAAAGG
TCTTCCCCCAAGAAGAAAGGGAGGCAAAATTCGTCTGGTCATGGGGACGG
TTCTATGGCAACAAACAGGGCCTGGCCGGCCAACAAAAAGCGAATAAACA
GCACCGGG
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