DY271197

Overview
NameDY271197
Unique NameDY271197
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length900
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CDKL5_HUMAN (Cyclin-dependent kinase-like 5 OS=Homo sapiens GN=CDKL5 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.327e-25
Identity = 51/139 (36.69%), Postives = 86/139 (61.87%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWE-ECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDHN 609
            M +++++  VG+G +G V +   K++ E+VAIKK K    + E +   LRE+K LR +   NIV+LKE  R    LY VFEY+E ++ +L+++        +V+++ +Q+ + + + H+    HRD+KPENLL+S  HN
Sbjct:   10 MNKFEILGVVGEGAYGVVLKCRHKETHEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENLLIS--HN 146          

HSP 2 Score: 39.2762 bits (90), Expect = 1.327e-25
Identity = 17/35 (48.57%), Postives = 25/35 (71.43%), Query Frame = 2
Query:  608 IKIADSGLAREIN--SRPPFTEYVLTRWYRAPEVL 706
            +K+ D G AR ++  +   +TEYV TRWYR+PE+L
Sbjct:  149 LKLCDFGFARNLSEGNNANYTEYVATRWYRSPELL 183          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CDKL5_MOUSE (Cyclin-dependent kinase-like 5 OS=Mus musculus GN=Cdkl5 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.329e-25
Identity = 51/139 (36.69%), Postives = 86/139 (61.87%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWE-ECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDHN 609
            M +++++  VG+G +G V +   K++ E+VAIKK K    + E +   LRE+K LR +   NIV+LKE  R    LY VFEY+E ++ +L+++        +V+++ +Q+ + + + H+    HRD+KPENLL+S  HN
Sbjct:   10 MNKFEILGVVGEGAYGVVLKCRHKETHEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENLLIS--HN 146          

HSP 2 Score: 39.2762 bits (90), Expect = 1.329e-25
Identity = 17/35 (48.57%), Postives = 25/35 (71.43%), Query Frame = 2
Query:  608 IKIADSGLAREIN--SRPPFTEYVLTRWYRAPEVL 706
            +K+ D G AR ++  +   +TEYV TRWYR+PE+L
Sbjct:  149 LKLCDFGFARNLSEGNNANYTEYVATRWYRSPELL 183          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: MPK8_ARATH (Mitogen-activated protein kinase 8 OS=Arabidopsis thaliana GN=MPK8 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 1.339e-25
Identity = 53/148 (35.81%), Postives = 86/148 (58.11%), Query Frame = 1
Query:  178 FCSTRKMERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHPNIVKLKEVI-----RENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD 603
            F    +  RY++ + VG G++G V  A+   +GE VAIKK+   +    +    LRE+K LR + HP++V++K ++     RE   +Y VFE ME  L+Q++K  +    E   + + +Q+ +GL Y+H    FHRDLKP+N+L + D
Sbjct:   95 FTEYGEANRYQIQEVVGKGSYGVVASAVDSHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDVVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPE-HYQFFLYQLLRGLKYVHAANVFHRDLKPKNILANAD 241          

HSP 2 Score: 43.5134 bits (101), Expect = 1.339e-25
Identity = 27/69 (39.13%), Postives = 36/69 (52.17%), Query Frame = 2
Query:  608 IKIADSGLAR-EINSRPP---FTEYVLTRWYRAPEVLPPDIPAHLQS*FLGQRRLSWPNLLLPAPLFPG 802
            +KI D GLAR   N  P    +T+YV TRWYRAPE+       +  +  +      +  +LL  PLFPG
Sbjct:  244 LKICDFGLARVSFNDAPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSVGCIFAEMLLGKPLFPG 312          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CDKA2_ORYSJ (Cyclin-dependent kinase A-2 OS=Oryza sativa subsp. japonica GN=CDKA-2 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.356e-25
Identity = 45/139 (32.37%), Postives = 87/139 (62.59%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDHN 609
            ME+Y+ ++++G+GT+G V++   + + E +A+KK++ ++         +RE+  L++M H NIV+L++V+ +   +Y VFEY++  L + M       +   V+++ +Q+ +G+AY H     HRDLKP+NLL+ +  N
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKGKHRHTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHKEKCIYLVFEYLDLDLKKHMDSSPDFKNHRIVKSFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTN 139          

HSP 2 Score: 37.3502 bits (85), Expect = 1.356e-25
Identity = 28/78 (35.90%), Postives = 35/78 (44.87%), Query Frame = 2
Query:  605 TIKIADSGLAREINSRP-PFTEYVLTRWYRAPEVLPPDIPAHLQS*FLGQRRLSWP-----------NLLLPAPLFPG 802
            ++K+AD GLAR        FT  V+T WYRAPE+L            LG R  S P            ++   PLFPG
Sbjct:  140 SLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEIL------------LGARHYSTPVDMWSVGCIFAEMVNQKPLFPG 205          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: MPK17_ORYSJ (Mitogen-activated protein kinase 17 OS=Oryza sativa subsp. japonica GN=MPK17 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 1.743e-25
Identity = 53/148 (35.81%), Postives = 87/148 (58.78%), Query Frame = 1
Query:  178 FCSTRKMERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHPNIVKLKEVI-----RENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD 603
            F    +  RYK+ + +G G++G V  A+  Q+GE VAIKK+   +    +    LRE+K LR + HP+IV++K ++     RE   +Y +FE ME  L+Q++K  +    E   + + +Q+ +G+ Y+H    FHRDLKP+N+L + D
Sbjct:   96 FTEYGEANRYKVSEVIGKGSYGVVAAAVDTQTGERVAIKKINDVFDHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVIFELMESDLHQVIKANDDLTPEHH-QFFLYQLLRGMKYIHAASVFHRDLKPKNILANAD 242          

HSP 2 Score: 41.9726 bits (97), Expect = 1.743e-25
Identity = 26/69 (37.68%), Postives = 35/69 (50.72%), Query Frame = 2
Query:  608 IKIADSGLAR-EINSRPP---FTEYVLTRWYRAPEVLPPDIPAHLQS*FLGQRRLSWPNLLLPAPLFPG 802
            +K+ D GLAR   N  P    +T+YV TRWYRAPE+       +  +  +      +  LL   PLFPG
Sbjct:  245 LKVCDFGLARVSFNDTPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSVGCIFAELLTGKPLFPG 313          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: MPK14_ORYSJ (Mitogen-activated protein kinase 14 OS=Oryza sativa subsp. japonica GN=MPK14 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.745e-25
Identity = 52/140 (37.14%), Postives = 84/140 (60.00%), Query Frame = 1
Query:  202 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHPNIVKLKEVI-----RENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD 603
            RYK+ + +G G++G V  A+   +G+ VAIKK+   +    +    LRE+K LR + HP+IV++K ++     RE   +Y VFE ME  L+Q++K  +    E   + + +Q+ +GL Y+H    FHRDLKP+N+L + D
Sbjct:   12 RYKIEEVIGKGSYGVVCSALDTHTGDKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPE-HYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD 150          

HSP 2 Score: 42.743 bits (99), Expect = 1.745e-25
Identity = 26/69 (37.68%), Postives = 35/69 (50.72%), Query Frame = 2
Query:  608 IKIADSGLAREINSRPP----FTEYVLTRWYRAPEVLPPDIPAHLQS*FLGQRRLSWPNLLLPAPLFPG 802
            +KI D GLAR   S  P    +T+Y+ TRWYRAPE+       +  +  +      +  LL   PLFPG
Sbjct:  153 LKICDFGLARVAFSDTPTAIFWTDYIATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPG 221          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CDK17_HUMAN (Cell division protein kinase 17 OS=Homo sapiens GN=CDK17 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 1.746e-25
Identity = 50/136 (36.76%), Postives = 86/136 (63.24%), Query Frame = 1
Query:  193 KMERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSK 600
            KME Y  ++++G+GT+ +V++  SK +  +VA+K+++ ++     C  +REV  L+ + H NIV L +++  +  L  VFEY++  L Q M D     S   V+ + +Q+ +GLAY H+R   HRDLKP+NLL+++
Sbjct:  188 KMETYIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINE 323          

HSP 2 Score: 31.5722 bits (70), Expect = 1.746e-25
Identity = 16/38 (42.11%), Postives = 24/38 (63.16%), Query Frame = 2
Query:  596 QKTTIKIADSGLAREIN-SRPPFTEYVLTRWYRAPEVL 706
            +K  +K+AD GLAR  +     ++  V+T WYR P+VL
Sbjct:  323 EKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVL 360          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CDC2_CHERU (Cell division control protein 2 homolog OS=Chenopodium rubrum GN=CDC2 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.765e-25
Identity = 48/143 (33.57%), Postives = 88/143 (61.54%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDREKCFSEAE----VRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDHN 609
            M++Y+ ++++G+GT+G V++A  K + E +A+KK++ ++         +RE+  L++M H NIV+L++V+     LY VFEY++  L    K  + C   A+    ++ + +Q+ +G+AY H     HRDLKP+NLL+ +  N
Sbjct:    1 MDQYEKVEKIGEGTYGVVYKARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDL---KKHMDSCPDFAKDPRMIKRFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRQTN 140          

HSP 2 Score: 38.891 bits (89), Expect = 1.765e-25
Identity = 29/81 (35.80%), Postives = 35/81 (43.21%), Query Frame = 2
Query:  596 QKTTIKIADSGLAREINSRP-PFTEYVLTRWYRAPEVLPPDIPAHLQS*FLGQRRLSWP-----------NLLLPAPLFPG 802
            Q   +K+AD GLAR        FT  V+T WYRAPE+L            LG R  S P            ++   PLFPG
Sbjct:  138 QTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEIL------------LGSRHYSTPVDVWSVGCIFAEMVNQKPLFPG 206          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: MPK19_ARATH (Mitogen-activated protein kinase 19 OS=Arabidopsis thaliana GN=MPK19 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.950e-25
Identity = 56/145 (38.62%), Postives = 87/145 (60.00%), Query Frame = 1
Query:  202 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHPNIVKLKEVI-----RENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDHN*NC 618
            RY++++ +G G++G V  AI  Q+GE VAIKK+   +    + +  LREVK LR + HP+IV++K ++     RE   +Y VFE ME  L+Q++K  +    E   + + +Q+ + L YMH    +HRDLKP+N+L     N NC
Sbjct:   24 RYRILEVIGKGSYGVVCAAIDTQTGEKVAIKKINDVFEHVSDALRILREVKLLRLLRHPDIVEIKSIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHH-QFFLYQMLRALKYMHTANVYHRDLKPKNILA----NANC 163          

HSP 2 Score: 40.4318 bits (93), Expect = 2.950e-25
Identity = 25/69 (36.23%), Postives = 35/69 (50.72%), Query Frame = 2
Query:  608 IKIADSGLAR-EINSRPP---FTEYVLTRWYRAPEVLPPDIPAHLQS*FLGQRRLSWPNLLLPAPLFPG 802
            +K+ D GLAR   N  P    +T+YV TRWYRAPE+       +  +  +      +  +L   PLFPG
Sbjct:  165 LKVCDFGLARVSFNDTPTTVFWTDYVATRWYRAPELCGSFCSKYTPAIDIWSIGCIFAEVLTGKPLFPG 233          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: MPK15_ARATH (Mitogen-activated protein kinase 15 OS=Arabidopsis thaliana GN=MPK15 PE=2 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 2.952e-25
Identity = 54/148 (36.49%), Postives = 86/148 (58.11%), Query Frame = 1
Query:  178 FCSTRKMERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHPNIVKLKEVI-----RENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD 603
            F    +  RY++ + VG G++G V  AI   +GE VAIKK+   +    +    LRE+K LR + HP++V++K ++     RE   +Y VFE ME  L+Q++K  +    E   + + +Q+ +GL Y+H    FHRDLKP+N+L + D
Sbjct:   81 FTEYGEANRYQIQEVVGKGSYGVVGSAIDTHTGERVAIKKINDVFDHISDATRILREIKLLRLLLHPDVVEIKHIMLPPSRREFRDVYVVFELMESDLHQVIKANDDLTPEHH-QFFLYQLLRGLKYVHAANVFHRDLKPKNILANAD 227          

HSP 2 Score: 43.5134 bits (101), Expect = 2.952e-25
Identity = 27/69 (39.13%), Postives = 36/69 (52.17%), Query Frame = 2
Query:  608 IKIADSGLAR-EINSRPP---FTEYVLTRWYRAPEVLPPDIPAHLQS*FLGQRRLSWPNLLLPAPLFPG 802
            +KI D GLAR   N  P    +T+YV TRWYRAPE+       +  +  +      +  +LL  PLFPG
Sbjct:  230 LKICDFGLARVSFNDAPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSVGCIFAEMLLGKPLFPG 298          
The following BLAST results are available for this feature:
BLAST of DY271197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDKL5_HUMAN1.327e-2536.69Cyclin-dependent kinase-like 5 OS=Homo sapiens GN=... [more]
CDKL5_MOUSE1.329e-2536.69Cyclin-dependent kinase-like 5 OS=Mus musculus GN=... [more]
MPK8_ARATH1.339e-2535.81Mitogen-activated protein kinase 8 OS=Arabidopsis ... [more]
CDKA2_ORYSJ1.356e-2532.37Cyclin-dependent kinase A-2 OS=Oryza sativa subsp.... [more]
MPK17_ORYSJ1.743e-2535.81Mitogen-activated protein kinase 17 OS=Oryza sativ... [more]
MPK14_ORYSJ1.745e-2537.14Mitogen-activated protein kinase 14 OS=Oryza sativ... [more]
CDK17_HUMAN1.746e-2536.76Cell division protein kinase 17 OS=Homo sapiens GN... [more]
CDC2_CHERU1.765e-2533.57Cell division control protein 2 homolog OS=Chenopo... [more]
MPK19_ARATH2.950e-2538.62Mitogen-activated protein kinase 19 OS=Arabidopsis... [more]
MPK15_ARATH2.952e-2536.49Mitogen-activated protein kinase 15 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YC24FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271197 ID=DY271197; Name=DY271197; organism=Citrus clementina; type=EST; length=900bp
GAAAACTTCTTGGTTTGTTCTCTCGCATATAGCTACGCAAAATTAATGTT
GGACTCAGCTGGACCAGTGGAACATTTTGTTTAAATTTAACAGTTTTTTC
TAGCAATTATCTTGGTACAATAAATGTCATATAACTTCAAAGGTTCTTAC
ACTTTTCTTGAATAAAGAAAGAGCTGTTTCTGTTCCACAAGGAAAATGGA
AAGGTACAAGTTAATTAAGGAAGTTGGTGATGGAACATTTGGGAGTGTCT
GGCGAGCTATTAGTAAGCAGTCTGGTGAAGTTGTTGCAATTAAAAAAATG
AAGAAAAAATATTATTCCTGGGAGGAGTGTGTCAATTTGAGAGAAGTTAA
GTCGCTACGGAAAATGAGTCATCCAAACATTGTGAAGCTTAAGGAAGTCA
TCCGGGAAAATGATATCTTGTACTTTGTTTTTGAATACATGGAATGTAGC
CTTTACCAACTTATGAAAGACAGAGAGAAGTGTTTCTCTGAAGCTGAAGT
CAGAAATTGGTGTTTCCAAGTTTTCCAAGGTCTGGCTTACATGCATCAGC
GGGGATATTTTCATCGTGACCTTAAGCCTGAGAACTTGCTTGTTTCAAAA
GACCACAATTAAAATTGCTGATTCTGGCCTTGCCCGTGAAATTAACTCAC
GTCCACCGTTCACGGAATACGTCCTCACCCGATGGTATCGAGCTCCTGAA
GTGCTGCCTCCAGACATACCTGCACACCTCCAAAGTTGATTCCTCGGGCA
ACGGAGGCTATCATGGCCAAATTTATTACTCCCCGCCCCTCTTTTCCCGG
GTACCCCCGGAACCCAATCTAAATGATCAAACCTCGTAGTGTATAAAGCC
ATCCCCACCACGGGAAATCTGGGACAGCAAGACACCCCTCCCGCGGTGAA
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