DY271199
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_DANRE (Superoxide dismutase [Cu-Zn] OS=Danio rerio GN=sod1 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.013e-40 Identity = 82/149 (55.03%), Postives = 97/149 (65.10%), Query Frame = 3 Query: 60 KAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 KAV VL GT V GTV F+QEG+ P V+G ++GL PG HGFHVHA GD TNGC+S GPHFNP K HG P D RH A + D + LSG +SIIGR +V+H DDLGKGG+E S TGNAGGR+ACG+IG+ Sbjct: 4 KAVCVLKGTGEVTGTVYFNQEGEKKPVKVTGEITGLTPGKHGFHVHAFGDNTNGCISAGPHFNPHDKTHGGPTDSVRHVGDLGNVTADASGVAKIEIEDAMLTLSGQHSIIGRTMVIHEKEDDLGKGGNEESLKTGNAGGRLACGVIGI 152
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_MACMU (Superoxide dismutase [Cu-Zn] OS=Macaca mulatta GN=SOD1 PE=2 SV=3) HSP 1 Score: 164.851 bits (416), Expect = 3.434e-40 Identity = 81/150 (54.00%), Postives = 99/150 (66.00%), Query Frame = 3 Query: 57 VKAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 +KAV VL G V+GT++F Q E +GP V GS++GL G HGFHVH GD T GC S GPHFNP ++HG P+DE RH A + D+ I LSG +SIIGR +VVH DDLGKGG+E SK TGNAGGR+ACG+IG+ Sbjct: 3 MKAVCVLKGDSPVQGTINFEQKESNGPVKVWGSITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRQHGGPKDEERHVGDLGNVTAGKDGVAKVSFEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLACGVIGI 152
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_MACFU (Superoxide dismutase [Cu-Zn] OS=Macaca fuscata fuscata GN=SOD1 PE=2 SV=3) HSP 1 Score: 164.851 bits (416), Expect = 3.434e-40 Identity = 81/150 (54.00%), Postives = 99/150 (66.00%), Query Frame = 3 Query: 57 VKAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 +KAV VL G V+GT++F Q E +GP V GS++GL G HGFHVH GD T GC S GPHFNP ++HG P+DE RH A + D+ I LSG +SIIGR +VVH DDLGKGG+E SK TGNAGGR+ACG+IG+ Sbjct: 3 MKAVCVLKGDSPVQGTINFEQKESNGPVKVWGSITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRQHGGPKDEERHVGDLGNVTAGKDGVAKVSFEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLACGVIGI 152
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_MACFA (Superoxide dismutase [Cu-Zn] OS=Macaca fascicularis GN=SOD1 PE=2 SV=3) HSP 1 Score: 164.851 bits (416), Expect = 3.434e-40 Identity = 81/150 (54.00%), Postives = 99/150 (66.00%), Query Frame = 3 Query: 57 VKAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 +KAV VL G V+GT++F Q E +GP V GS++GL G HGFHVH GD T GC S GPHFNP ++HG P+DE RH A + D+ I LSG +SIIGR +VVH DDLGKGG+E SK TGNAGGR+ACG+IG+ Sbjct: 3 MKAVCVLKGDSPVQGTINFEQKESNGPVKVWGSITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRQHGGPKDEERHVGDLGNVTAGKDGVAKVSFEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLACGVIGI 152
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_CEBAP (Superoxide dismutase [Cu-Zn] OS=Cebus apella GN=SOD1 PE=2 SV=3) HSP 1 Score: 162.155 bits (409), Expect = 2.226e-39 Identity = 80/150 (53.33%), Postives = 98/150 (65.33%), Query Frame = 3 Query: 57 VKAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 +KAV VL G V+GT++F Q E +GP V GS++GL G HGFHVH GD T GC S GPHFNP ++HG PEDE RH A ++ D+ I LSG +SIIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 3 MKAVCVLKGDGPVQGTINFEQKESNGPVKVWGSITGLAEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRKHGGPEDEERHVGDLGNVTAGKDGVAKVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_SHEEP (Superoxide dismutase [Cu-Zn] OS=Ovis aries GN=SOD1 PE=1 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 2.907e-39 Identity = 80/148 (54.05%), Postives = 95/148 (64.19%), Query Frame = 3 Query: 60 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 KAV VL G V+GT+ F +GD V+GS++GL G HGFHVH GD T GC S GPHFNP K+HG P+DE RH A +VD I LSG SIIGR +VVH PDDLG+GG+E S TGNAGGR+ACG+IG+ Sbjct: 4 KAVCVLKGDGPVQGTIRFEAKGD-KVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVKADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGGRLACGVIGI 150
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_BOSMU (Superoxide dismutase [Cu-Zn] OS=Bos mutus grunniens GN=SOD1 PE=2 SV=3) HSP 1 Score: 160.999 bits (406), Expect = 4.958e-39 Identity = 79/148 (53.38%), Postives = 95/148 (64.19%), Query Frame = 3 Query: 60 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 KAV VL G V+GT+ F +GD V+GS++GL G HGFHVH GD T GC S GPHFNP K+HG P+DE RH A +VD+ I LSG SIIGR +VVH PDDLG+GG+E S TGNAG R+ACG+IG+ Sbjct: 4 KAVCVLKGDGPVQGTIHFEAKGD-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAVVDIVDSLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSRLACGVIGI 150
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_CARCR (Superoxide dismutase [Cu-Zn] OS=Caretta caretta PE=1 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 6.476e-39 Identity = 80/161 (49.69%), Postives = 97/161 (60.25%), Query Frame = 3 Query: 57 VKAVAVLGGT------------EGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 VKAV VL G E VKG + F Q+G+GP T+SGS++GL G HGFHVH GD TNGC S G HFNP GK HG P+D RH A + D+ I L+G SIIGR +VVH DDLGKGG++ S TGNAG R+ACG++G+ Sbjct: 4 VKAVCVLKGEDPVKEPVKGPVKEPVKGIIYFEQQGNGPVTLSGSITGLTEGKHGFHVHEFGDNTNGCTSAGAHFNPPGKNHGGPQDNERHVGDLGNVIANKEGVAEVCIKDSLISLTGSQSIIGRTMVVHEKEDDLGKGGNDESLKTGNAGSRLACGVVGI 164
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_ASPJA (Superoxide dismutase [Cu-Zn] (Fragment) OS=Aspergillus japonicus GN=sodC PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 6.476e-39 Identity = 76/111 (68.47%), Postives = 83/111 (74.77%), Query Frame = 3 Query: 177 HGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 509 HGFHVHALGDTTNGCMSTGPHFNP GKEHG P+DENRHA A V D+QIPL+G +SIIGRAVVVHADPDDLGKGGHELSKTTGN+ + G+QG Sbjct: 8 HGFHVHALGDTTNGCMSTGPHFNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHADPDDLGKGGHELSKTTGNSNSSMDSCAHGIQG 118
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_PIG (Superoxide dismutase [Cu-Zn] OS=Sus scrofa GN=SOD1 PE=1 SV=2) HSP 1 Score: 159.844 bits (403), Expect = 1.105e-38 Identity = 76/148 (51.35%), Postives = 95/148 (64.19%), Query Frame = 3 Query: 60 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 KAV VL G V+GT+ F +G+ V+G++ GL G HGFHVH GD T GC S GPHFNP K+HG P+D+ RH AT + D+ I LSG +SIIGR +VVH PDDLG+GG+E S TGNAG R+ACG+IG+ Sbjct: 4 KAVCVLKGDGPVQGTIYFELKGEKTVLVTGTIKGLAEGDHGFHVHQFGDNTQGCTSAGPHFNPESKKHGGPKDQERHVGDLGNVTAGKDGVATVYIEDSVIALSGDHSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSRLACGVIGI 151 The following BLAST results are available for this feature:
BLAST of DY271199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271199 ID=DY271199; Name=DY271199; organism=Citrus clementina; type=EST; length=660bpback to top |