DY271211

Overview
NameDY271211
Unique NameDY271211
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length946
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLCD4_MACFA (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4 OS=Macaca fascicularis GN=PLCD4 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 5.183e-26
Identity = 78/223 (34.98%), Postives = 122/223 (54.71%), Query Frame = 1
Query:  142 VKSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLF---GDI-NPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILF--TPGSEC*KEFPSPD 789
            V+ +F+ +S +G  +T+     FL E QKE   + E A  +ID         + H   L+++ F  YL    GDI NP   P   ++ DMT P++HYFI + HN+YL G+QL    S    IRAL++G R +E+D+W     + V V HG T+T+ +     + ++ +YAF  S+YPV+++LE H + + Q  +A  +T+ LGE L   T       + PSP+
Sbjct:  208 VQELFESFSADGQKLTLLEFSDFLREEQKERDCTSELALELIDRYEPSDSGKLRHV--LSMDGFLSYLCSKDGDIFNPACLP---IYQDMTQPLNHYFICSSHNTYLVGDQLCGQSSVEGYIRALKRGCRCVEVDVWDGPSGEPV-VYHGHTLTSRILFKDVVATVAQYAFQTSDYPVILSLETHCSWEQQQTMARHLTEILGEQLLSTTLDGVLPTQLPSPE 424          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLCD4_PONAB (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4 OS=Pongo abelii GN=PLCD4 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.841e-26
Identity = 78/223 (34.98%), Postives = 122/223 (54.71%), Query Frame = 1
Query:  142 VKSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLF---GDI-NPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILF--TPGSEC*KEFPSPD 789
            V+ +F+ +S +G  +T+     FL E QKE   + E A  +ID         + H   L+++ F  YL    GDI NP   P   ++ DMT P++HYFI + HN+YL G+QL    S    IRAL++G R +E+D+W     + V V HG T+T+ +     + ++ +YAF  S+YPV+++LE H + + Q  +A  +T+ LGE L   T       + PSP+
Sbjct:  208 VQELFESFSADGQKLTLLEFLDFLREEQKERDCTSELALELIDHYEPSDSGKLRHV--LSMDGFLSYLCSKDGDIFNPACLP---IYQDMTQPLNHYFICSSHNTYLVGDQLCGQSSVEGYIRALKRGCRCVEVDVWDGPSGEPV-VYHGHTLTSRILFKDVVATVAQYAFQTSDYPVILSLETHCSWEQQQTMARHLTEILGEQLLSTTLDGVLPTQLPSPE 424          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLCD4_HUMAN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4 OS=Homo sapiens GN=PLCD4 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.841e-26
Identity = 78/223 (34.98%), Postives = 122/223 (54.71%), Query Frame = 1
Query:  142 VKSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLF---GDI-NPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILF--TPGSEC*KEFPSPD 789
            V+ +F+ +S +G  +T+     FL E QKE   + E A  +ID         + H   L+++ F  YL    GDI NP   P   ++ DMT P++HYFI + HN+YL G+QL    S    IRAL++G R +E+D+W     + V V HG T+T+ +     + ++ +YAF  S+YPV+++LE H + + Q  +A  +T+ LGE L   T       + PSP+
Sbjct:  208 VQELFESFSADGQKLTLLEFLDFLQEEQKERDCTSELALELIDRYEPSDSGKLRHV--LSMDGFLSYLCSKDGDIFNPACLP---IYQDMTQPLNHYFICSSHNTYLVGDQLCGQSSVEGYIRALKRGCRCVEVDVWDGPSGEPV-VYHGHTLTSRILFKDVVATVAQYAFQTSDYPVILSLETHCSWEQQQTMARHLTEILGEQLLSTTLDGVLPTQLPSPE 424          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLCD4_BOVIN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4 OS=Bos taurus GN=PLCD4 PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 1.155e-25
Identity = 75/223 (33.63%), Postives = 126/223 (56.50%), Query Frame = 1
Query:  142 VKSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLF---GDI-NPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG--SEC*KEFPSPD 789
            V+ +F+++S +G  +T+     FL E QKE + + + A  +ID     +   + H   L+++ F  YL    GDI NP   P   ++ DMT P++HY+I + HN+YL G+QL    S    IRAL++G R +E+DIW     + + V HG T+T+ +     + +I +YAF  S+YPV+++LE+H + + Q  +   +T+ LG+ L T     +   + PSP+
Sbjct:  208 VQELFEKFSSDGQKLTLLEFVDFLQEEQKEGERASDLALELIDRYEPSESGKLRHV--LSMDGFLGYLCSKDGDIFNPTCHP---LYQDMTQPLNHYYINSSHNTYLVGDQLCGQSSVEGYIRALKRGCRCVEVDIWDGPSGEPI-VYHGHTLTSRIPFKDVVAAIGQYAFQTSDYPVILSLENHCSWEQQEIIVRHLTEILGDQLLTTALDGQPPTQLPSPE 424          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLD3A_DANRE (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-3-A OS=Danio rerio GN=plcd3a PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.360e-25
Identity = 79/223 (35.43%), Postives = 127/223 (56.95%), Query Frame = 1
Query:  148 SMFDQYSENG-TMTVDHLHRFLIEVQKEDKASKEDAQAIIDS--LRELKHLNIFHRRGLNLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLG-EILFTPGSEC-*KEFPSPDH*K 798
            ++F  YS NG  +T   L  FL + Q ED AS   A+++I +  L +    N+F    +    F  Y+    N   +P    V+ DM+ P++HY+I + HN+YLT +Q+ S  S  P IRAL +G R +ELD W   K + + + HG T+T+ V   + + +I +YAF AS YP++++LE+H + + QA +A+ +   LG ++L  P S+   K+ PSP+  K
Sbjct:  235 AVFRHYSGNGCVLTTLELRDFLGD-QGED-ASLVHAKSLIQTFELNDWAQKNLF----MTQNGFTMYMLSKENDVFNPDHTHVYQDMSKPLAHYYISSSHNTYLTKDQVTSASSTEPYIRALNQGCRCVELDCWDGDKGEPI-IYHGHTLTSKVLFKEVIETIAQYAFKASPYPLILSLENHCSVEQQAIMAQQLQSILGKKLLAKPLSDLPLKQLPSPEELK 450          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLCD4_MOUSE (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4 OS=Mus musculus GN=Plcd4 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.411e-23
Identity = 69/203 (33.99%), Postives = 115/203 (56.65%), Query Frame = 1
Query:  142 VKSMFDQYS-ENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 744
            ++ +F+ +S +   +T+     FL + QKE   + + A  +ID     ++  + H   L+ + F KYL   D N   S    ++ DMT P+SHY+I + HN+YL G+QL    S    IRAL++G R +E+D W     + V V HG T+T+ +     L ++ +YAF +S+YP++++LE+H T + Q  +A  +T+ LGE L
Sbjct:  208 IEEIFEDFSSDKQKLTLLEFVDFLRKEQKEKDHAPDLALELIDRYEPSENGRLLHV--LSKDGFLKYLCSKDGNIFNSDCLPIYQDMTQPLSHYYINSSHNTYLVGDQLCGQSSVEGYIRALKRGCRCVEVDTWDGPDGEPV-VYHGHTLTSRILFKDVLATLAQYAFQSSDYPLILSLENHCTWEQQRTMAHHLTEILGEQL 407          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PIP1_DROME (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase classes I and II OS=Drosophila melanogaster GN=Plc21C PE=2 SV=3)

HSP 1 Score: 109.768 bits (273), Expect = 2.408e-23
Identity = 70/213 (32.86%), Postives = 111/213 (52.11%), Query Frame = 1
Query:  142 VKSMFDQY---SENGTMTVDHLHRFLIEVQKEDK--------ASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 744
            V+ +FD     S+   M++  L  FL + Q++ +        A+   A+ +I      K      +  L+L+ F +YL GD NP ++P+ + +  DM  P+SHYFI + HN+YLTG+QL    S     + L  G R +ELD W N + +   ++HG T    +     L +I E AF  SEYPV+++ E+H  P  QAK+A    +  G++L
Sbjct:  226 VERLFDSIVGNSKRKCMSIAQLVEFLNKTQRDPRLNEILYPYANPARAKELIQQYEPNKFNA--QKGQLSLDGFLRYLMGDDNPIMAPSKLDLCDDMDQPMSHYFINSSHNTYLTGHQLTGKSSVEIYRQCLLAGCRCVELDFW-NGRTEEPVIVHGYTFVPEIFAKDVLEAIAESAFKTSEYPVILSFENHCNPRQQAKIANYCREIFGDML 435          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLCZ1_MOUSE (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase zeta-1 OS=Mus musculus GN=Plcz1 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.364e-23
Identity = 67/217 (30.88%), Postives = 116/217 (53.46%), Query Frame = 1
Query:  136 DAVKSMFDQYSENGTMTVDH-LHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLFGDINPPLSPT-PVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC*KEFP 780
            + +  +F+ Y+EN  +  ++ L  FL + Q E +    D+  II+    ++ +     R +++E F +Y+F             V+ DM  P+S YFI + HN+YL  +Q+         + AL KG R +E+D W  S+ + + V HG T T+ +     +++I +YAFV S+YPVV++LE+H +P  Q  +A ++  T G+ L    S+  +EFP
Sbjct:   79 EEITEIFNTYTENRKILSENSLIEFLTQEQYEMEIDHSDSVEIINKYEPIEEVK--GERQMSIEGFARYMFSSECLLFKENCKTVYQDMNHPLSDYFISSSHNTYLISDQILGPSDIWGYVSALVKGCRCLEIDCWDGSQNEPI-VYHGYTFTSKLLFKTVVQAINKYAFVTSDYPVVLSLENHCSPGQQEVMASILQSTFGDFLL---SDMLEEFP 289          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLCD3_MOUSE (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-3 OS=Mus musculus GN=Plcd3 PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 5.364e-23
Identity = 74/223 (33.18%), Postives = 120/223 (53.81%), Query Frame = 1
Query:  142 VKSMFDQYS-ENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG--SEC*KEFPSPDH*K 798
            ++ +F +YS E+  ++   L  FL E Q ED A+   AQ +I +  EL      H   + L+ F  YL       L+     V  DM  P++HYFI + HN+YLT +Q+    S    IRA  +G R +ELD W     + V + HG T+T+ +     +++++++AF +S YPV+++LE+H   + QA +A  +   LG++L T    S+  +E PSP+  K
Sbjct:  252 LEEIFRRYSGEDRVLSASELLEFL-EDQGEDGATLACAQQLIQTY-ELNETAKQHEL-MTLDGFMMYLLSPEGAALNVAHTCVFQDMGQPLAHYFISSSHNTYLTDSQIGGTSSTEAYIRAFAQGCRCVELDCWEGPGGEPV-IYHGHTLTSKILFRDVIQAVRDHAFTSSPYPVILSLENHCGLEQQAVMARHLRSILGDMLVTQALDSQNPEELPSPEQLK 470          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLCD3_HUMAN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-3 OS=Homo sapiens GN=PLCD3 PE=1 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 5.364e-23
Identity = 74/223 (33.18%), Postives = 118/223 (52.91%), Query Frame = 1
Query:  142 VKSMFDQYS-ENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG--SEC*KEFPSPDH*K 798
            ++ +F QYS E+  ++   L  FL E Q E+ A+   AQ +I +  EL      H   + L+ F  YL       L  T   V  DM  P++HYFI + HN+YLT +Q+    S    +RA  +G R +ELD W     + V + HG T+T+ +     +++++++AF  S YPV+++LE+H   + QA +A  +   LG++L T    S   +E PSP+  K
Sbjct:  256 LEEIFHQYSGEDRVLSAPELLEFL-EDQGEEGATLARAQQLIQTY-ELNETAKQHEL-MTLDGFMMYLLSPEGAALDNTHTCVFQDMNQPLAHYFISSSHNTYLTDSQIGGPSSTEAYVRAFAQGCRCVELDCWEGPGGEPV-IYHGHTLTSKILFRDVVQAVRDHAFTLSPYPVILSLENHCGLEQQAAMARHLCTILGDMLVTQALDSPNPEELPSPEQLK 474          
The following BLAST results are available for this feature:
BLAST of DY271211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
PLCD4_MACFA5.183e-2634.981-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCD4_PONAB8.841e-2634.981-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCD4_HUMAN8.841e-2634.981-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCD4_BOVIN1.155e-2533.631-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLD3A_DANRE3.360e-2535.431-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCD4_MOUSE1.411e-2333.991-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PIP1_DROME2.408e-2332.861-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCZ1_MOUSE5.364e-2330.881-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCD3_MOUSE5.364e-2333.181-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCD3_HUMAN5.364e-2333.181-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP9YD16FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271211 ID=DY271211; Name=DY271211; organism=Citrus clementina; type=EST; length=946bp
CAAAACATTTTCAACATTCCCATCACTTTCACAGATTACCCTTTACTCAA
TCACGCGTTTGTCATGTCTAAACAGACTTACAGAGTCTGCTTCTGCTTCC
GGCGGCGGTTCCACGTCGCCGCATCGGAGGCGCCGGACGCCGTCAAGTCC
ATGTTCGATCAGTACTCCGAGAATGGCACCATGACGGTCGATCACCTTCA
CCGCTTCTTGATCGAGGTTCAGAAAGAAGATAAAGCCTCCAAAGAAGACG
CGCAAGCGATCATCGATAGCTTGCGCGAGCTCAAGCACCTGAATATCTTT
CATCGCAGGGGCCTCAATCTTGAAGCTTTCTTTAAGTACCTCTTCGGTGA
TATTAATCCTCCGCTTTCGCCTACTCCAGTGGTGCATCATGATATGACTG
CCCCGGTGTCTCATTACTTTATATATACTGGCCACAATTCCTATCTGACT
GGTAATCAGCTTAATAGTGACTGCAGCGACGTTCCCATCATACGTGCCCT
GCAGAAAGGGGTGAGAGTGATTGAGTTGGATATATGGCCAAATTCGAAGA
AAGATAATGTGGATGTTCTTCATGGAGGGACAATGACTGCTCCAGTGGAA
CTCATCAAATGTTTGAGGTCTATCAAAGAATATGCCTTTGTTGCATCTGA
GTATCCAGTTGTTATTACCCTAGAAGATCACCTTACTCCAGATCTTCAGG
CTAAAGTGGCTGAGATGGTCACTCAAACGTTGGGAGAAATCCTGTTTACC
CCTGGCTCAGAATGCTAAAAGGAATTCCCCTCCCCGGATCACTGAAAAGA
CGGATCATCATTCCACCCAAACCGCCAAGGAATACCTTGAGGCCAAAAAA
GAAAGGAAAAAAAAAAACATTCCAAAAAGGGTAAAGGGTTCCCTGAAGAA
AAACCCTGGGGAAAAAAAGTCCCCCACCTTAAAACCCTAAAAAAAA
back to top