DY271247

Overview
NameDY271247
Unique NameDY271247
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length949
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271247 vs. ExPASy Swiss-Prot
Match: 6PGL2_ORYSI (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. indica GN=OsI_025867 PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 5.487e-60
Identity = 105/217 (48.39%), Postives = 151/217 (69.59%), Query Frame = 3
Query:  105 KNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPKRITFTFPVITSSAYIARVVCGAGKSSAVQIAL 755
            +N  +++F+S ++++  LA+Y + +S    KE+G F + LSGG L+  L KL E PY  +++W+KW++FW DER V K+H +SNY++  +GFLS+VPI  G+VY+IND  + E AA DYE  ++ L K   +  S +   PKFDL+LL MG DGH+ASLFP HP L+  + W+T+I DSP+PPP+RITFT PVI S++ IA V  G  KS AV +A+
Sbjct:   13 RNNEIRIFESSDEMSTDLAEYISQVSEISVKERGYFAIALSGGPLVSFLGKLCEAPYNKTLDWSKWYIFWSDERAVAKNHAESNYRITKEGFLSKVPILNGHVYSINDNATVEDAATDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYITDSPQPPPERITFTLPVINSASNIAIVTTGDDKSEAVHLAI 229          
BLAST of DY271247 vs. ExPASy Swiss-Prot
Match: 6PGL1_ORYSJ (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. japonica GN=Os03g0416500 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 4.645e-59
Identity = 108/224 (48.21%), Postives = 151/224 (67.41%), Query Frame = 3
Query:   84 MAAENKNKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPKRITFTFPVITSSAYIARVVCGAGKSSAVQIAL 755
            +A+    KN  +++F+S +++A  LA+Y + +S    KE+G F + LSGG LI  +RKL E PY  +++W+KW++FW DER V K+H DS YK   + FLS+VPI  G+VY+IND ++ E AA DYE  ++ L K   +  S +   PKFDL+LL +G DGH+ASLFP HP L+  + WVT+I DSP PPP+RITFT PVI S++ IA V  G  K+ AV  A+
Sbjct:   23 VASYEPKKNNEIRMFESSDEMATDLAEYISQVSEISIKERGYFAIALSGGPLISFMRKLCEAPYNKTLDWSKWYIFWADERAVAKNHVDSYYKSTKEDFLSKVPILNGHVYSINDNVTVEDAATDYEFVIRQLVKIRTVGVSESNDCPKFDLILLSIGSDGHVASLFPNHPALELKDDWVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKAKAVYFAI 246          
BLAST of DY271247 vs. ExPASy Swiss-Prot
Match: 6PGL1_ORYSI (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. indica GN=OsI_011697 PE=3 SV=2)

HSP 1 Score: 228.409 bits (581), Expect = 4.645e-59
Identity = 108/224 (48.21%), Postives = 151/224 (67.41%), Query Frame = 3
Query:   84 MAAENKNKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPKRITFTFPVITSSAYIARVVCGAGKSSAVQIAL 755
            +A+    KN  +++F+S +++A  LA+Y + +S    KE+G F + LSGG LI  +RKL E PY  +++W+KW++FW DER V K+H DS YK   + FLS+VPI  G+VY+IND ++ E AA DYE  ++ L K   +  S +   PKFDL+LL +G DGH+ASLFP HP L+  + WVT+I DSP PPP+RITFT PVI S++ IA V  G  K+ AV  A+
Sbjct:   23 VASYEPKKNNEIRMFESSDEMATDLAEYISQVSEISIKERGYFAIALSGGPLISFMRKLCEAPYNKTLDWSKWYIFWADERAVAKNHVDSYYKSTKEDFLSKVPILNGHVYSINDNVTVEDAATDYEFVIRQLVKIRTVGVSESNDCPKFDLILLSIGSDGHVASLFPNHPALELKDDWVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKAKAVYFAI 246          
BLAST of DY271247 vs. ExPASy Swiss-Prot
Match: 6PGL_MOUSE (6-phosphogluconolactonase OS=Mus musculus GN=Pgls PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.454e-36
Identity = 87/213 (40.85%), Postives = 124/213 (58.22%), Query Frame = 3
Query:  117 VQVFDSEEDLAVSLAKYTADLSAK-FGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDS--IEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPKRITFTFPVITSSAYIARVVCGAGKSSAVQ 746
            + VF S ++L  SLA+  A  +A     ++G F + LSGGSL+  L + +      +    +A+W + + DER+VP DH +S Y L     LS++PI    V  IN AL  E AAEDY   L+   + + +        P FDL++LG+GPDGH  SLFP HPLL+E EK V  I DSPKPPP+R+T T PV+ ++  I  V  G GK++ ++
Sbjct:    9 ISVFSSPQELGASLAQLVAQRAASCLEGDRGRFALGLSGGSLVSMLARDLPAAAAPAGPASFARWTLGFCDERLVPFDHAESTYGLYRTHLLSKLPIPDSQVLTINPALPVEDAAEDYARKLRQALQGDAV--------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAAQSIIFVATGEGKAAVLK 213          
BLAST of DY271247 vs. ExPASy Swiss-Prot
Match: 6PGL_RAT (6-phosphogluconolactonase OS=Rattus norvegicus GN=Pgls PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.230e-36
Identity = 86/213 (40.38%), Postives = 124/213 (58.22%), Query Frame = 3
Query:  117 VQVFDSEEDLAVSLAKYTADLSAK-FGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDS--IEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPKRITFTFPVITSSAYIARVVCGAGKSSAVQ 746
            + VF S ++L  SLA+  A  +A      +G F + LSGGSL+  L + +      +    +A+W + + DER+VP DH +S Y L     LS++PI    V  I+ AL  E AAEDY   L+   + + +        P FDL++LG+GPDGH  SLFPGHPLL+E EK V  I DSPKPPP+R+T T PV+ ++  +  V  G GK++ ++
Sbjct:    9 ISVFSSPQELGASLAQLVAQRAASCLEGNRGRFALGLSGGSLVSMLARDLPAATAPAGPASFARWTLGFCDERLVPFDHAESTYGLYRTHLLSKLPIPDSQVLTIDPALPVEDAAEDYARKLRQAFQGDTV--------PVFDLLILGVGPDGHTCSLFPGHPLLQEREKIVAPIGDSPKPPPQRVTLTLPVLNAAQSVIFVATGEGKAAVLK 213          
BLAST of DY271247 vs. ExPASy Swiss-Prot
Match: 6PGL_BOVIN (6-phosphogluconolactonase OS=Bos taurus GN=PGLS PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.042e-34
Identity = 85/213 (39.91%), Postives = 123/213 (57.75%), Query Frame = 3
Query:  117 VQVFDSEEDLAVSLAKYTADLSAKFGKEKGS-FTVVLSGGSLIDSLRKLVEPPYVDS--IEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPKRITFTFPVITSSAYIARVVCGAGKSSAVQ 746
            + VF S ++L  SLA+     +A    + G+ FT+ LSGGSL+  L + +      +     A+W + + DER+VP +H +S Y L     LS++PI    V  IN AL  E AAEDY   L+   + + +        P FDL++LG+GPDGH  SLFP HPLL+E EK V  I DSPKPPP+R+T T PV+ ++  +  V  G GK++ ++
Sbjct:    9 ISVFSSPQELGASLAQLVVQQAACCLADAGARFTLGLSGGSLVSMLARELPAAAAPAGPASLARWTLGFCDERLVPFEHAESTYGLYRTHLLSKLPIFDSQVITINPALPVEEAAEDYAKKLRQAFQGDSI--------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAARTVIYVATGEGKAAILK 213          
BLAST of DY271247 vs. ExPASy Swiss-Prot
Match: 6PGL_HUMAN (6-phosphogluconolactonase OS=Homo sapiens GN=PGLS PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 86/215 (40.00%), Postives = 122/215 (56.74%), Query Frame = 3
Query:  117 VQVFDSEEDLAVSLAKYTADLSAK-FGKEKGSFTVVLSGGSLIDSLRK----LVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPKRITFTFPVITSSAYIARVVCGAGKSSAVQ 746
            + VF S ++L  +LA+  A  +A      +  F + LSGGSL+  L +     V P    S+  A+W + + DER+VP DH +S Y L     LS++PI    V  IN  L  E AAEDY   L+   + + +        P FDL++LG+GPDGH  SLFP HPLL+E EK V  I DSPKPPP+R+T T PV+ ++  +  V  G GK++ ++
Sbjct:    9 ISVFSSSQELGAALAQLVAQRAACCLAGARARFALGLSGGSLVSMLARELPAAVAPAGPASL--ARWTLGFCDERLVPFDHAESTYGLYRTHLLSRLPIPESQVITINPELPVEEAAEDYAKKLRQAFQGDSI--------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAARTVIFVATGEGKAAVLK 213          
BLAST of DY271247 vs. ExPASy Swiss-Prot
Match: 6PGL_SCHPO (Probable 6-phosphogluconolactonase OS=Schizosaccharomyces pombe GN=SPCC16C4.10 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.663e-32
Identity = 89/224 (39.73%), Postives = 119/224 (53.12%), Query Frame = 3
Query:  114 NVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNY----KLAYDGFLSQVPITTGNVYAINDALSAEG------AAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPKRITFTFPVITSSAYIARVVCGAGKSSAVQIAL 755
            +V  F     +A +L  +  + S    K  G FT+ LSGGSL   L + +       IE++KW VF+ DER+VP D ++SNY    KL +D F    P     ++ IN  L  E        A++YE  L H     + A S+    P FDL+LLG GPDGH  SLFP H +L+E+  WV  + DSPKPP  RIT T PV+T +  IA V  GAGK   + I +
Sbjct:    2 SVYSFSDVSLVAKALGAFVKEKSEASIKRHGVFTLALSGGSLPKVLAEGLAQQR--GIEFSKWEVFFADERIVPLDDENSNYALCKKLIFDKFEGFDP---KKIHTINPELLKENPIDPQNVADEYEKQLVH-----VFANSSTVKVPVFDLLLLGCGPDGHTCSLFPDHEVLQEDVAWVAPVTDSPKPPKDRITLTLPVVTHAQAIAFVTTGAGKKDILPIVI 215          
BLAST of DY271247 vs. ExPASy Swiss-Prot
Match: 6PGL_MYCTU (6-phosphogluconolactonase OS=Mycobacterium tuberculosis GN=pgl PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.033e-30
Identity = 81/219 (36.99%), Postives = 115/219 (52.51%), Query Frame = 3
Query:  108 NKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATG--FPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPKRITFTFPVITSSAYIARVVCGAGKSSAVQIALG 758
            + ++++F   + L  +  K            +G   +VL+GG    +L + +       IEW+K H+FW DER VP+D D+ N K A    L+ V I +  V+ +  A S      D +     L    +LA SAA G   P FD+ LLGMGP+GHI SLFP  P + E+ + V  + DSPKPPP+RIT T P I  S  +  +V G GK+ AV  A+G
Sbjct:    2 SSSIEIFPDSDILVAAAGKRLVGAIGAAVAARGQALIVLTGGGNGIALLRYLSAQ-AQQIEWSKVHLFWGDERYVPEDDDERNLKQARRALLNHVDIPSNQVHPM--AASDGDFGGDLDAAA--LAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIG 215          
BLAST of DY271247 vs. ExPASy Swiss-Prot
Match: 6PGL_MYCBO (6-phosphogluconolactonase OS=Mycobacterium bovis GN=pgl PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.033e-30
Identity = 81/219 (36.99%), Postives = 115/219 (52.51%), Query Frame = 3
Query:  108 NKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATG--FPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPKRITFTFPVITSSAYIARVVCGAGKSSAVQIALG 758
            + ++++F   + L  +  K            +G   +VL+GG    +L + +       IEW+K H+FW DER VP+D D+ N K A    L+ V I +  V+ +  A S      D +     L    +LA SAA G   P FD+ LLGMGP+GHI SLFP  P + E+ + V  + DSPKPPP+RIT T P I  S  +  +V G GK+ AV  A+G
Sbjct:    2 SSSIEIFPDSDILVAAAGKRLVGAIGAAVAARGQALIVLTGGGNGIALLRYLSAQ-AQQIEWSKVHLFWGDERYVPEDDDERNLKQARRALLNHVDIPSNQVHPM--AASDGDFGGDLDAAA--LAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIG 215          
The following BLAST results are available for this feature:
BLAST of DY271247 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
6PGL2_ORYSI5.487e-6048.39Probable 6-phosphogluconolactonase 2 OS=Oryza sati... [more]
6PGL1_ORYSJ4.645e-5948.21Probable 6-phosphogluconolactonase 1 OS=Oryza sati... [more]
6PGL1_ORYSI4.645e-5948.21Probable 6-phosphogluconolactonase 1 OS=Oryza sati... [more]
6PGL_MOUSE1.454e-3640.856-phosphogluconolactonase OS=Mus musculus GN=Pgls ... [more]
6PGL_RAT4.230e-3640.386-phosphogluconolactonase OS=Rattus norvegicus GN=... [more]
6PGL_BOVIN1.042e-3439.916-phosphogluconolactonase OS=Bos taurus GN=PGLS PE... [more]
6PGL_HUMAN3.032e-3440.006-phosphogluconolactonase OS=Homo sapiens GN=PGLS ... [more]
6PGL_SCHPO1.663e-3239.73Probable 6-phosphogluconolactonase OS=Schizosaccha... [more]
6PGL_MYCTU2.033e-3036.996-phosphogluconolactonase OS=Mycobacterium tubercu... [more]
6PGL_MYCBO2.033e-3036.996-phosphogluconolactonase OS=Mycobacterium bovis G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YF15FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271247 ID=DY271247; Name=DY271247; organism=Citrus clementina; type=EST; length=949bp
CAAACTCACTCCTCCAATTTCGAAACATTTCCCTTGATCGGAACAAATCA
TCGGACTGCGTGAGAATCAAGGCATCATCATCAATGGCTGCCGAGAATAA
GAACAAGAACAAGAACGTACAAGTTTTTGACTCAGAGGAAGATCTGGCTG
TGTCTTTGGCCAAATACACCGCCGATCTATCTGCCAAGTTCGGTAAAGAG
AAGGGCTCCTTCACTGTCGTCTTATCCGGTGGTTCTCTCATCGACTCCCT
CAGGAAATTAGTGGAACCCCCGTATGTAGATTCAATTGAATGGGCGAAAT
GGCATGTGTTTTGGGTTGATGAAAGAGTTGTTCCCAAGGATCATGATGAT
AGCAATTATAAGCTTGCTTATGATGGTTTCCTTTCTCAGGTACCAATTAC
CACTGGCAATGTCTATGCCATCAATGATGCATTATCTGCTGAAGGTGCAG
CTGAAGATTACGAGACTTGTCTCAAGCATTTGACAAAGAGCAATATATTA
GCTACATCTGCTGCTACTGGTTTTCCAAAGTTTGATCTCATGCTTCTGGG
TATGGGTCCAGATGGACATATAGCTTCTCTGTTTCCAGGGCATCCTCTTC
TCAAGGAGAATGAGAAATGGGTTACTTTCATTAAAGACTCGCCAAAGCCA
CCTCCAAAGAGAATCACTTTCACCTTCCCTGTAATCACCTCATCTGCATA
TATTGCAAGGGTGGTGTGTGGTGCTGGAAAATCCAGTGCAGTTCAAATTG
CATTGGGTAAAATCAAAACTCTGATTTGCTGCCAGTTCAAATGGCATTGG
CTGAAAAAAAATTCCTTGGTTTCTTGACAAAAACCGACTTTAAACCGGTA
AAAATCAAAACAATTTGCTGGAAGGCAGAAATCCCGGTTAACCGGAAAAA
AATTGGGTTGAACGCGGTGGGGTTGACCCCAAAAACTGGCGGATTTTTT
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