DY271261

Overview
NameDY271261
Unique NameDY271261
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length971
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271261 vs. ExPASy Swiss-Prot
Match: CYSC_ACAM1 (Adenylyl-sulfate kinase OS=Acaryochloris marina (strain MBIC 11017) GN=cysC PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.866e-35
Identity = 72/173 (41.62%), Postives = 110/173 (63.58%), Query Frame = 2
Query:  155 SINIFWQ*STIGRLDMQNLLNQKGCVVWITGLNGSRKITLPFSVNKELYSRGKLSYILDGDNLQHGLNKNLCFNAEHRTENIRRVGKVA*LFADADLICIATLISPNKKDRDACRAMLPDSDFIDVFMNMPLELCEAKYPKRLY*LARAGKIKGFTGINDPYDPPLNCKITIK 673
            S N+ W  ST+ R + Q        ++W TGL+G+ K TL  +V   L      ++++DGDN++HGL  +L F++E R ENIRR+G+VA LF +A +I ++  ISP + DRD  R ++P+ DFI+++    LE+CE +  K LY  AR+G+I  FTGI+ PY+PP   +I +K
Sbjct:    5 SSNVVWHKSTVTRQNRQEQNGHLSTILWFTGLSGAGKSTLAHTVEDALSKMNCRTFVIDGDNIRHGLCADLGFSSEDRVENIRRIGEVAKLFTEAGIIVLSAFISPFRADRDRVRELVPEGDFIEIYCQASLEVCEERDVKGLYKKARSGEIPNFTGISSPYEPPEEPEIIVK 177          
BLAST of DY271261 vs. ExPASy Swiss-Prot
Match: CYSC_THEYD (Adenylyl-sulfate kinase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=cysC PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 6.355e-35
Identity = 76/162 (46.91%), Postives = 104/162 (64.20%), Query Frame = 2
Query:  185 IGRLDMQNLLNQKGCVVWITGLNGSRKITLPFSVNKELYSRGKLSYILDGDNLQHGLNKNLCFNAEHRTENIRRVGKVA*LFADADLICIATLISPNKKDRDACRAMLPDSDFIDVFMNMPLELCEAKYPKRLY*LARAGKIKGFTGINDPYDPPLNCKITI 670
            I R D + L   K  V+W TGL  S K T+   V KELY RG  +Y+LDGDN+++GL  +L F+ E R ENIRRVG++  LF DA +I I + ISP K+DR+  R++  + DFI+V+   P+E C  +  K +Y  A  G+IK FTGI+ PY+ P N +ITI
Sbjct:   15 INREDRERLHGHKSFVIWFTGLPASGKSTIAHLVEKELYKRGCSTYVLDGDNVRYGLCSDLGFSIEERKENIRRVGELVKLFVDAGIIVITSFISPFKEDREKVRSLFKEEDFIEVYTKCPVETCSLRDQKGIYKKAIKGEIKNFTGISAPYEEPENPEITI 176          
BLAST of DY271261 vs. ExPASy Swiss-Prot
Match: CYSC_SHEHH (Adenylyl-sulfate kinase OS=Shewanella halifaxensis (strain HAW-EB4) GN=cysC PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 6.355e-35
Identity = 74/175 (42.29%), Postives = 112/175 (64.00%), Query Frame = 2
Query:  161 NIFWQ*STIGRLDMQNLLNQKGCVVWITGLNGSRKITLPFSVNKELYSRGKLSYILDGDNLQHGLNKNLCFNAEHRTENIRRVGKVA*LFADADLICIATLISPNKKDRDACRAMLPDSDFIDVFMNMPLELCEAKYPKRLY*LARAGKIKGFTGINDPYDPPLNCKITIKPKDG 685
            +I W   +I +    +   QK  ++W TGL+GS K TL  ++ + L+  G  +Y+LDGDN++HGL K+L F+ + R EN+RRVG+VA L  DA L+ ++  ISP + +R+  RA+  D  FI+V ++ P+E+CEA+ PK LY  ARAG+IK FTGI+  Y+ P   ++ I    G
Sbjct:    3 DIVWHQHSIDKQSRADQKGQKPILLWFTGLSGSGKSTLAGALERALFDAGFHTYLLDGDNVRHGLCKDLGFSLDDRDENLRRVGEVAKLMVDAGLVVLSAFISPTRAERERVRALFDDGQFIEVHVSTPIEVCEARDPKGLYSKARAGEIKNFTGISASYEVPTAAELIIDTSKG 177          
BLAST of DY271261 vs. ExPASy Swiss-Prot
Match: CYSC_SHEDO (Adenylyl-sulfate kinase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=cysC PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 8.300e-35
Identity = 74/175 (42.29%), Postives = 112/175 (64.00%), Query Frame = 2
Query:  161 NIFWQ*STIGRLDMQNLLNQKGCVVWITGLNGSRKITLPFSVNKELYSRGKLSYILDGDNLQHGLNKNLCFNAEHRTENIRRVGKVA*LFADADLICIATLISPNKKDRDACRAMLPDSDFIDVFMNMPLELCEAKYPKRLY*LARAGKIKGFTGINDPYDPPLNCKITIKPKDG 685
            +I W   +I +       +Q   ++W TGL+G+ K TL  ++ + L+  G  +Y+LDGDN++HGL K+L F+   R EN+RRVG+VA L  DA L+ ++  ISP + +RD  RA+ P+  FI+V ++ PL +CEA+ PK LY  AR+G+IK FTGI+ PY+ P   ++TI    G
Sbjct:    3 DIVWHQHSIDQAARGAQKSQNPVLLWFTGLSGAGKSTLAGALERALFDAGFHTYLLDGDNVRHGLCKDLGFSLSDRDENLRRVGEVAKLMVDAGLVVLSAFISPTRAERDRVRALFPEGRFIEVHVSTPLSVCEARDPKGLYVKARSGEIKEFTGISSPYEAPTAAELTIDTSRG 177          
BLAST of DY271261 vs. ExPASy Swiss-Prot
Match: PAPS2_MOUSE (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 OS=Mus musculus GN=Papss2 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.416e-34
Identity = 74/153 (48.37%), Postives = 104/153 (67.97%), Query Frame = 2
Query:  221 KGCVVWITGLNGSRKITLPFSVNKELYSRGKLSYILDGDNLQHGLNKNLCFNAEHRTENIRRVGKVA*LFADADLICIATLISPNKKDRDACRAMLPDS--DFIDVFMNMPLELCEAKYPKRLY*LARAGKIKGFTGINDPYDPPLNCKITIK 673
            +GC VW+TGL+G+ K T+ F++ + L S     Y LDGDN++HGLNKNL F+A  R ENIRR+ +VA LFADA L+CI + ISP  KDR+  R +   +   F ++F++ PL +CE++  K LY  ARAG+IKGFTGI+  Y+ P   +  +K
Sbjct:   42 RGCTVWLTGLSGAGKTTISFALEEYLVSHAIPCYSLDGDNVRHGLNKNLGFSAGDREENIRRIAEVARLFADAGLVCITSFISPFAKDRENARKIHESAGLPFFEIFVDAPLNICESRDVKGLYKRARAGEIKGFTGIDSDYEKPETPECVLK 194          
BLAST of DY271261 vs. ExPASy Swiss-Prot
Match: CYSC_VIBCH (Adenylyl-sulfate kinase OS=Vibrio cholerae GN=cysC PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.415e-34
Identity = 70/170 (41.18%), Postives = 111/170 (65.29%), Query Frame = 2
Query:  161 NIFWQ*STIGRLDMQNLLNQKGCVVWITGLNGSRKITLPFSVNKELYSRGKLSYILDGDNLQHGLNKNLCFNAEHRTENIRRVGKVA*LFADADLICIATLISPNKKDRDACRAMLPDSDFIDVFMNMPLELCEAKYPKRLY*LARAGKIKGFTGINDPYDPPLNCKITI 670
            N+ W    + +     L  Q+  V+W TGL+G+ K T+  ++   L + G  +Y+LDGDN++HGL  +L F+ + R ENIRR+G++A L +DA LI +   ISP++ +R   R +LP+ +F++V++N  L++CEA+ PK LY  ARAG+I+ FTGI+  Y+ PLN  I +
Sbjct:   18 NVVWHRHAVDKAQRATLKQQRPAVLWFTGLSGAGKSTVAGALENRLAALGYHTYLLDGDNVRHGLCSDLGFSEQDRRENIRRIGELAKLMSDAGLIVLTAFISPHRAERQMVRDLLPNGEFLEVYVNTSLDVCEARDPKGLYKKARAGEIRQFTGIDSAYEAPLNPDIDL 187          
BLAST of DY271261 vs. ExPASy Swiss-Prot
Match: CYSC_RHOBA (Adenylyl-sulfate kinase OS=Rhodopirellula baltica GN=cysC PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 3.154e-34
Identity = 82/199 (41.21%), Postives = 115/199 (57.79%), Query Frame = 2
Query:  161 NIFWQ*STIGRLDMQNLLNQKGCVVWITGLNGSRKITLPFSVNKELYSRGKLSYILDGDNLQHGL-----------------NKNLCFNAEHRTENIRRVGKVA*LFADADLICIATLISPNKKDRDACRAMLPDS----DFIDVFMNMPLELCEAKYPKRLY*LARAGKIKGFTGINDPYDPPLNCKITIKPKDGICP 694
            NI W   T+ R D ++ L Q+G VVW TGL+G  K T+   +++ L  RG    +LDGDN++HGL                    L F    R ENIRR+G V  LFA A +I +A  +SP ++DRD  R  +  S    DF++VF++ PLE+C+ + PK LY  A AG+IK FTGI+DPYD P + +I +K ++G  P
Sbjct:   27 NIVWHAHTVSREDRESKLGQRGVVVWFTGLSGCGKSTIANELDRLLIDRGATCTLLDGDNVRHGLCAPPSVLKEEHGEDFAGRFGLGFGPTDREENIRRIGAVTELFASAGVIVLAAFVSPYQRDRDRVRNTIESSGRAGDFLEVFVDTPLEICKQRDPKGLYQKAIAGEIKNFTGISDPYDAPPSPEIHLKWREGQTP 225          
BLAST of DY271261 vs. ExPASy Swiss-Prot
Match: CYSC_PSEE4 (Adenylyl-sulfate kinase OS=Pseudomonas entomophila (strain L48) GN=cysC PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.154e-34
Identity = 72/164 (43.90%), Postives = 106/164 (64.63%), Query Frame = 2
Query:  161 NIFWQ*STIGRLDMQNLLNQKGCVVWITGLNGSRKITLPFSVNKELYSRGKLSYILDGDNLQHGLNKNLCFNAEHRTENIRRVGKVA*LFADADLICIATLISPNKKDRDACRAMLPDSDFIDVFMNMPLELCEAKYPKRLY*LARAGKIKGFTGINDPYDPPL 652
            ++ W      RL    +   + C +W TGL+GS K T+  +++  L+ RG  +Y+LDGDN++ GLNK+L F+ + R ENIRRVG+VA LF DA LI     ISP +KDR   R +L + ++++VF++  L  CE + PK LY  ARAG++  FTGI+ PY+PP+
Sbjct:    3 DLHWHGHATSRLARVEMNGHRPCTIWFTGLSGSGKSTIANALDGWLHRRGCHTYVLDGDNVRQGLNKDLGFSEQDRVENIRRVGEVAKLFNDAGLIVSCAFISPYEKDRHLVRQLLNEDEYVEVFLSTSLADCERRDPKGLYRKARAGELANFTGIDSPYEPPV 166          
BLAST of DY271261 vs. ExPASy Swiss-Prot
Match: NODQ_RHIME (Bifunctional enzyme nodQ OS=Rhizobium meliloti GN=nodQ PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 7.027e-34
Identity = 71/171 (41.52%), Postives = 111/171 (64.91%), Query Frame = 2
Query:  161 NIFWQ*STIGRLDMQNLLNQKGCVVWITGLNGSRKITLPFSVNKELYSRGKLSYILDGDNLQHGLNKNLCFNAEHRTENIRRVGKVA*LFADADLICIATLISPNKKDRDACRAMLPDSDFIDVFMNMPLELCEAKYPKRLY*LARAGKIKGFTGINDPYDPPLNCKITIK 673
            N+ W    + +     + NQ   V+W TGL+GS K T+   +++ L+++GK +Y+LDGDN++HGLN++L F  E R ENIRRV +VA L ADA LI + + ISP + +R   R ++ + +FI++F++ PL+ C  + PK LY  A AGKI  FTG++  Y+ P N ++ I+
Sbjct:  439 NVHWHALEVNKSARSAMKNQLPAVLWFTGLSGSGKSTIANELDRILHAQGKHTYLLDGDNVRHGLNRDLGFTEEDRVENIRRVAEVAKLMADAGLIVLVSFISPFRDERRMARELMEEGEFIEIFVDTPLDECARRDPKGLYEKALAGKIANFTGVSSCYEAPENPELHIR 609          
BLAST of DY271261 vs. ExPASy Swiss-Prot
Match: CYSNC_XYLFT (Bifunctional enzyme cysN/cysC OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=cysNC PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.199e-33
Identity = 76/190 (40.00%), Postives = 116/190 (61.05%), Query Frame = 2
Query:  161 NIFWQ*STIGRLDMQNLLNQKGCVVWITGLNGSRKITLPFSVNKELYSRGKLSYILDGDNLQHGLNKNLCFNAEHRTENIRRVGKVA*LFADADLICIATLISPNKKDRDACRAMLPDSDFIDVFMNMPLELCEAKYPKRLY*LARAGKIKGFTGINDPYDPPLNCKITIKPKDGICPPPICMAGQIVSL 730
            N+ WQ   I  +    +  Q   V+W TGL+G+ K  +   V+K L++ G  ++ILDGDN++HGLN++L F  E R ENIRRV +VA L  DA L+ + + ISP + +R   R      +F++VF+++PL + EA+  K LY  ARAG I  FTGI+ PY+PP + ++ ++   G    P  +A Q++SL
Sbjct:  431 NVHWQPLDIDHVARARIKGQTPKVLWFTGLSGAGKSAIANIVDKRLHALGYHTFILDGDNVRHGLNRDLSFTVEDRVENIRRVAEVARLMVDAGLVVLVSFISPFRDERQLARERFAADEFVEVFVDVPLAVAEARDVKGLYAKARAGLITDFTGIDSPYEPPQHPELHLRADQG---TPEQLASQVLSL 617          
The following BLAST results are available for this feature:
BLAST of DY271261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 167
Match NameE-valueIdentityDescription
CYSC_ACAM14.866e-3541.62Adenylyl-sulfate kinase OS=Acaryochloris marina (s... [more]
CYSC_THEYD6.355e-3546.91Adenylyl-sulfate kinase OS=Thermodesulfovibrio yel... [more]
CYSC_SHEHH6.355e-3542.29Adenylyl-sulfate kinase OS=Shewanella halifaxensis... [more]
CYSC_SHEDO8.300e-3542.29Adenylyl-sulfate kinase OS=Shewanella denitrifican... [more]
PAPS2_MOUSE1.416e-3448.37Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
CYSC_VIBCH2.415e-3441.18Adenylyl-sulfate kinase OS=Vibrio cholerae GN=cysC... [more]
CYSC_RHOBA3.154e-3441.21Adenylyl-sulfate kinase OS=Rhodopirellula baltica ... [more]
CYSC_PSEE43.154e-3443.90Adenylyl-sulfate kinase OS=Pseudomonas entomophila... [more]
NODQ_RHIME7.027e-3441.52Bifunctional enzyme nodQ OS=Rhizobium meliloti GN=... [more]
CYSNC_XYLFT1.199e-3340.00Bifunctional enzyme cysN/cysC OS=Xylella fastidios... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YG06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271261 ID=DY271261; Name=DY271261; organism=Citrus clementina; type=EST; length=971bp
CTCTAAATGCCCTCTTCACTCCCTCTAGTTTCGGTTTCCATTAACTTAAT
AAATAAATACGTCCTCTCTCAGACTATTGCCAACAAACCGGGAAACTCTA
ATAATAAAGAGAAAATGAATATATTATATTTTTGTAATGGCTACTGTTGG
AAATTCAATTAATATATTTTGGCAATAATCTACTATTGGGAGGCTTGACA
TGCAGAACCTTCTCAACCAAAAAGGATGTGTTGTATGGATCACCGGTCTT
AATGGATCGAGGAAAATTACGCTACCATTTTCGGTTAACAAAGAACTTTA
TTCTAGGGGAAAGCTGTCTTATATCCTTGACGGAGATAACCTTCAACATG
GACTAAACAAAAATCTTTGTTTCAATGCAGAACATCGAACTGAAAATATA
CGTAGGGTTGGGAAAGTAGCATAGCTTTTTGCGGATGCTGATTTAATCTG
CATTGCCACTCTGATATCTCCTAATAAAAAAGACCGGGATGCTTGCCGTG
CAATGTTGCCAGATTCAGACTTTATTGACGTTTTTATGAATATGCCTCTG
GAATTGTGTGAGGCAAAATATCCCAAAAGACTCTACTAACTTGCGCGGGC
TGGAAAGATTAAAGGTTTCACTGGGATAAATGACCCTTATGACCCACCAT
TAAATTGCAAGATAACAATAAAGCCAAAAGATGGAATTTGCCCCCCTCCC
ATATGTATGGCAGGACAAATAGTGTCCTTATTTGAAGGAGGAAGGATATC
TACATTTTTAATTGATCTGCCTCCCTCCAAATTTTATTTTTATTTTAATT
TATTTTTTTTGGGGAACCTTCTCCGATCCTTTTCCTAGTTCCACCTGGAA
AGATGCTTTAAATCGTCACCTCAAAAATCTTTTGGGCTTCATCACAACCC
CCTTGCCATTTTATTAAAAATTAATTGGGGCCATAGTGGAAAACTGCAGA
TTTTCCAGAAAATTTTAAAAA
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