DY271265

Overview
NameDY271265
Unique NameDY271265
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1060
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271265 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 3.673e-63
Identity = 123/220 (55.91%), Postives = 154/220 (70.00%), Query Frame = 1
Query:   79 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVHWVGPLI 738
            +A G   ++    +++A +AEFI+TL+FVFAG GS +AF +LT+ GA  P+                     N SGGH+NPAVTFG  VGG+I++L G+ YW+AQLLG++VACLLL+FVT+G+      +S G      VVFEIV+TF LVYTVYATA DPKKGSLGTIAPIAIGFIVGANILA G F G SMNPA SFGPA+ +  +  +WV+WVGPLI
Sbjct:    4 LAFGSVGDSFSVTSIKAYVAEFIATLLFVFAGVGSAIAFGQLTNGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLRFVTHGKAIPTHGVSGGTTELEGVVFEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAADFAGNWVYWVGPLI 223          
BLAST of DY271265 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 6.266e-63
Identity = 122/220 (55.45%), Postives = 156/220 (70.91%), Query Frame = 1
Query:   79 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVHWVGPLI 738
            +A G   ++    +++A +AEFI+TL+FVFAG GS +A+ +LT+ GA  P+                     NISGGH+NPAVTFG  VGG+I++L G+ YW+AQLLG+TVACLLL FVT+G+     A++ G+     VVFE+V+TF LVYTVYATA DPKKGSLGTIAPIAIGFIVGANILA G F G SMNPA SFGPA+ +  +  +WV+WVGPL+
Sbjct:    4 LAFGSVGDSFSATSIKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATVACLLLGFVTHGKAIPTHAVA-GISELEGVVFEVVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGDFAGNWVYWVGPLV 222          
BLAST of DY271265 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 241.121 bits (614), Expect = 8.183e-63
Identity = 122/207 (58.94%), Postives = 145/207 (70.05%), Query Frame = 1
Query:  118 ALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVHWVGPLI 738
            +LRA LAEFISTL+FVFAG GS +A+ KLT + A                         NISGGHVNPAVTFG  VGG I+++ G+ YWIAQLLGST AC LLK+VT G      ++++G+G+   VV EI++TF LVYTVYATA DPKKGSLGTIAP+AIG IVGANILA G F G SMNPA SFGPA+ +  +  HWV+WVGPLI
Sbjct:   17 SLRAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGDFSGHWVYWVGPLI 223          
BLAST of DY271265 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 240.736 bits (613), Expect = 1.069e-62
Identity = 123/220 (55.91%), Postives = 157/220 (71.36%), Query Frame = 1
Query:   79 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVHWVGPLI 738
            +A G  R++    +L+A +AEFI+TL+FVFAG GS +A+++LT  GA  P+                     NISGGH+NPAVTFG  VGG+I++L GILYW+AQLLG++VAC LL++VT+GQ      +S G+     VV EIV+TF LVYTVYATA DPKKGSLGTIAP+AIGFIVGANILA G F G SMNPA SFGPA+ + ++  +WV+WVGPL+
Sbjct:    4 LAFGSFRDSLSAASLKAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQYVTHGQAIPTHGVS-GISEIEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWVGPLV 222          
BLAST of DY271265 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 4.061e-62
Identity = 122/220 (55.45%), Postives = 156/220 (70.91%), Query Frame = 1
Query:   79 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVHWVGPLI 738
            +A G   ++    +++A +AEFI+TL+FVFAG GS +A+ +LT+ GA  P+                     NISGGH+NPAVTFG  VGG+I++L G+ YWIAQLLG+++ACLLLKFVT+G+      ++ G+     VV EIV+TF LVYTVYATA DPKKGSLGTIAPIAIGFIVGANILA G F G SMNPA SFGPA+ + ++  +WV+WVGPLI
Sbjct:    4 LAFGSLGDSFSATSVKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTHGKAIPTHGVA-GISELEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWVGPLI 222          
BLAST of DY271265 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 4.490e-61
Identity = 125/221 (56.56%), Postives = 150/221 (67.87%), Query Frame = 1
Query:   76 NIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVHWVGPLI 738
            NIA G   ++    +L+A +AEFISTL+FVFAG GS +A+ KLT      P+                     NISGGHVNPAVTFG  +GG I++L G+ YWIAQLLG+ V  +L++F T G  T    LS GVGA+  VV EI++TFGLVYTVYATA DPKKGSLGTIAPIAIGFIVGANIL  G F G SMNPA SFGPA+ S  + N W++WVGPL+
Sbjct:    4 NIAFGRFDDSFSAASLKAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCT-GVATPTHGLS-GVGAFEGVVMEIIVTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGDYTNIWIYWVGPLV 222          
BLAST of DY271265 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 3.218e-59
Identity = 114/223 (51.12%), Postives = 145/223 (65.02%), Query Frame = 1
Query:   70 IRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVHWVGPLI 738
            ++ I +GH  EA  PD ++A + EFI+T +FVFAG GS MA + L  N                           +ISGGH+NPAVT G  +GG+IS+ R  LYWI QLL S+ AC LL ++T G  T    L+SGV     +++EI++TF L++TVYAT +DPKKGSL    P+  GF+VGANILAGGAF GASMNPA SFGPALVS +W +HWV+WVGPLI
Sbjct:    1 MKKIELGHHSEAAKPDCIKALIVEFITTFLFVFAGVGSAMATDSLVGNTL----VGLFAVAVAHAFVVAVMISAGHISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAACFLLSYLTGGMGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLLTGFVVGANILAGGAFSGASMNPARSFGPALVSGNWTDHWVYWVGPLI 219          
BLAST of DY271265 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 2.639e-53
Identity = 108/209 (51.67%), Postives = 133/209 (63.64%), Query Frame = 1
Query:  112 PDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVHWVGPLI 738
            P A RAAL+EF++T +FVFA EGS     K+ +    T                       N SGGHVNPAVTFG  VG  IS  R  LYW AQLLG+ +A LLL+  + G     F L   +   +A++ E+VMTFGLVYTVYATA+D + G  G IAP+AIG + GANILAGG FDGA+MNPA +FGPALV W+W +HWV+W+GPLI
Sbjct:   25 PGATRAALSEFVATAVFVFAAEGSVYGLWKM-YRDTGTLGGLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRLASGGMRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGG-GDIAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALVGWNWRHHWVYWLGPLI 231          
BLAST of DY271265 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.310e-52
Identity = 109/220 (49.55%), Postives = 139/220 (63.18%), Query Frame = 1
Query:   82 AVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT-TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVHWVGPLI 738
            A+GH REA+    +RA LAE I T +FVFAG GS MA  KL   G +T                       ++SGGH+NPAVT G    G I+L R  LY  AQLLGST+ACLLL F+    +     AL +GVGA   V+ E V+TF L++ VYAT +DP++ ++G + P+ +G +VGAN+LAGG F GASMNPA SFGPALV+  W +HWV+WVGPLI
Sbjct:    5 ALGHHREASDAGCVRAVLAELILTFLFVFAGVGSAMATGKLAGGGGDTVVGLTAVALAHTLVVAVMVSAGLHVSGGHINPAVTLGLAATGRITLFRSALYVAAQLLGSTLACLLLAFLAVADSGVPVHALGAGVGALRGVLMEAVLTFSLLFAVYATVVDPRR-AVGGMGPLLVGLVVGANVLAGGPFSGASMNPARSFGPALVAGVWADHWVYWVGPLI 223          
BLAST of DY271265 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.891e-51
Identity = 107/221 (48.42%), Postives = 141/221 (63.80%), Query Frame = 1
Query:   79 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ-TTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVHWVGPLI 738
            +A+GH REAT P  LRA +AE + T +FVF+G GS MA  KL   G +T                       ++SGGH+NPAVT G   GG+I+L R  LY  AQLLGS++ACLLL  +T G+      A + GVGA  AV  E V+TF L++ VYAT +D ++ ++G + P+ +G +VGANILAGG + GASMNPA SFGPAL +  W +HW++WVGPLI
Sbjct:    4 LALGHHREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKLG-GGGDTIMGLTAVAAAHALVVAVMVSAGLHVSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLGSSLACLLLAALTGGEEAVPVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVDRRR-AVGALGPLLVGLVVGANILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLI 222          
The following BLAST results are available for this feature:
BLAST of DY271265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
TIP22_MAIZE3.673e-6355.91Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
TIP21_MAIZE6.266e-6355.45Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
TIP21_ARATH8.183e-6358.94Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
TIP23_MAIZE1.069e-6255.91Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
TIP21_ORYSJ4.061e-6255.45Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
TIP22_ORYSJ4.490e-6156.56Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
TIP41_ARATH3.218e-5951.12Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1... [more]
TIP32_ORYSJ2.639e-5351.67Probable aquaporin TIP3-2 OS=Oryza sativa subsp. j... [more]
TIP44_MAIZE1.310e-5249.55Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1[more]
TIP43_ORYSJ1.891e-5148.42Probable aquaporin TIP4-3 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YG11FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271265 ID=DY271265; Name=DY271265; organism=Citrus clementina; type=EST; length=1060bp
CACTTACGTGAACTAGTAGTAATCACACCCCAAAGGTTCAATCTTCATCG
TTTGATCTCCATCATGCCGATCAGAAACATTGCCGTTGGCCATCCCCGTG
AGGCGACTCATCCAGATGCCCTAAGGGCAGCCCTAGCAGAGTTCATCTCA
ACTCTAATATTTGTCTTTGCCGGTGAAGGCTCGGGCATGGCCTTCAACAA
GCTCACTCACAACGGCGCCAACACCCCCTCCGGCCTCGTCGCCGCCTCTG
TTGCTCACGCTTTCGCCCTTTTCGTTGCTGTCGCCGTTGGCGCCAACATT
TCCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCGCCTTCGTTGGAGG
TAACATCTCCCTTCTACGAGGCATCCTCTACTGGATCGCCCAGCTTCTTG
GATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTACCAACGGCCAGACC
ACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCATGGAACGCAGTCGT
TTTCGAGATCGTGATGACATTCGGACTAGTGTACACAGTGTATGCCACAG
CCCTGGACCCAAAGAAGGGAAGCTTGGGGACAATTGCACCAATTGCAATT
GGTTTCATTGTAGGAGCCAACATCTTGGCGGGCGGGGCGTTTGATGGAGC
TTCAATGAACCCAGCAGTGTCATTCGGGCCAGCTTTGGTAAGCTGGAGCT
GGGACAACCACTGGGTCCACTGGGTCGGGCCCCTCATCGGTGGTGGGCTA
ACTGGGCTCTCCACAAATTTCTTCTTCTTAACCAGTCTCACAAGCAGCTC
CCAACACCCAATTACTAAGCTAAAAGCTTTGCACCTAGGTGAATTTTGCA
GCGGATGGTTTGTTTAAATTTTGTTTTACCCGAAGGTTTTTCCCTTTTAT
TTTCAAATTGTGTTTCAATTCAAGGGGCCGTGGACCCCGGTTCCCTCCAA
CCCTAACCTTGTCGGATTTTTGTTACACCTACTAATTGTTCATATCTTCG
CGAAGGGCTTTGATTTTTCTACCTCCCATCAAAATATTCCTTTATGCTAT
TAATAATATA
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