DY271293

Overview
NameDY271293
Unique NameDY271293
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1004
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271293 vs. ExPASy Swiss-Prot
Match: TEC_MOUSE (Tyrosine-protein kinase Tec OS=Mus musculus GN=Tec PE=1 SV=2)

HSP 1 Score: 58.151 bits (139), Expect = 8.804e-12
Identity = 42/106 (39.62%), Postives = 57/106 (53.77%), Query Frame = 1
Query:  283 IKNEDLEELKELGSGTFGTVYHGKWRGT-DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGV-VQDGPGGTLATVTEFMVNGSLRHVLLSKE 594
            I   +L  ++ELGSG FG V  GKWR    VAIK I++    G   E+     +F  EA+++ KL HP +V  YGV  Q  P   +  VTEFM  G L + L  ++
Sbjct:  364 INPSELTFMRELGSGLFGVVRLGKWRAQYKVAIKAIRE----GAMCEE-----DFIEEAKVMMKLTHPKLVQLYGVCTQQKP---IYIVTEFMERGCLLNFLRQRQ 457          

HSP 2 Score: 33.4982 bits (75), Expect = 8.804e-12
Identity = 16/39 (41.03%), Postives = 19/39 (48.72%), Query Frame = 3
Query:  609 HLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVN 725
            H  R   L +  D   GMEYL   + +H DL   N LVN
Sbjct:  459 HFSRDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVN 497          
BLAST of DY271293 vs. ExPASy Swiss-Prot
Match: Y9863_DICDI (Probable serine/threonine-protein kinase DDB_G0281745 OS=Dictyostelium discoideum GN=DDB_G0281745 PE=3 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 1.145e-11
Identity = 38/110 (34.55%), Postives = 63/110 (57.27%), Query Frame = 1
Query:  268 STLQIIKNEDLEELK----ELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLL 585
            +T + + N D +ELK    E+GSG +G+V  G W GT VAIK++ +      ++E+  + ++  RE +IL ++ HP +V F GV ++     +  +TEFM  G L   L+
Sbjct:  320 ATTKDMWNIDYKELKFVGNEIGSGKYGSVSLGYWLGTPVAIKKLHE------NNEETEILVQ--RELQILKEIRHPQIVQFLGVSRN-EKDEIHIITEFMDGGDLFDALI 420          

HSP 2 Score: 33.113 bits (74), Expect = 1.145e-11
Identity = 13/35 (37.14%), Postives = 25/35 (71.43%), Query Frame = 3
Query:  621 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVN 725
            +++L I++D A    +LH++ I+H DLK  N+L++
Sbjct:  429 KEKLRISLDIAQSCRFLHARGILHRDLKSQNILLS 463          
BLAST of DY271293 vs. ExPASy Swiss-Prot
Match: BMX_MOUSE (Cytoplasmic tyrosine-protein kinase BMX OS=Mus musculus GN=Bmx PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.358e-11
Identity = 49/118 (41.53%), Postives = 68/118 (57.63%), Query Frame = 1
Query:  238 VDLALGNFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGT-DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLS 588
            V +ALG    S +  +K E++  LKELG+G FG V  G+W+G  DVA+K IK+    G  SE      EF++EA+ + KL HP +V FYGV        +  VTE++ NG L + L S
Sbjct:  377 VSVALG----SGIWELKREEITLLKELGNGQFGVVQLGQWKGQYDVAVKMIKE----GAMSED-----EFFQEAQTMMKLSHPKLVKFYGVC--SKKYPIYIVTEYITNGCLLNYLKS 479          
BLAST of DY271293 vs. ExPASy Swiss-Prot
Match: M3K13_PONAB (Mitogen-activated protein kinase kinase kinase 13 OS=Pongo abelii GN=MAP3K13 PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 1.904e-11
Identity = 35/109 (32.11%), Postives = 55/109 (50.46%), Query Frame = 1
Query:  292 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKESQCPGILI 618
            E++ EL+ LGSG  G V+ GK+R  +VAIK++++   T               + + L KL HPN++AF GV    P      + E+  +G L  VL +     P +L+
Sbjct:  166 EEISELQWLGSGAQGAVFLGKFRAEEVAIKKVREQNET---------------DIKHLRKLKHPNIIAFKGVCTQAP--CYCIIMEYCAHGQLYEVLRAGRKITPRLLV 257          

HSP 2 Score: 33.4982 bits (75), Expect = 1.904e-11
Identity = 15/31 (48.39%), Postives = 19/31 (61.29%), Query Frame = 3
Query:  651 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIR 743
            A GM YLH   I+H DLK  N+LV   D ++
Sbjct:  264 ASGMNYLHLHKIIHRDLKSPNVLVTHTDAVK 294          
BLAST of DY271293 vs. ExPASy Swiss-Prot
Match: M3K13_HUMAN (Mitogen-activated protein kinase kinase kinase 13 OS=Homo sapiens GN=MAP3K13 PE=1 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 1.904e-11
Identity = 35/109 (32.11%), Postives = 55/109 (50.46%), Query Frame = 1
Query:  292 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKESQCPGILI 618
            E++ EL+ LGSG  G V+ GK+R  +VAIK++++   T               + + L KL HPN++AF GV    P      + E+  +G L  VL +     P +L+
Sbjct:  166 EEISELQWLGSGAQGAVFLGKFRAEEVAIKKVREQNET---------------DIKHLRKLKHPNIIAFKGVCTQAP--CYCIIMEYCAHGQLYEVLRAGRKITPRLLV 257          

HSP 2 Score: 33.4982 bits (75), Expect = 1.904e-11
Identity = 15/31 (48.39%), Postives = 19/31 (61.29%), Query Frame = 3
Query:  651 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIR 743
            A GM YLH   I+H DLK  N+LV   D ++
Sbjct:  264 ASGMNYLHLHKIIHRDLKSPNVLVTHTDAVK 294          
BLAST of DY271293 vs. ExPASy Swiss-Prot
Match: M3K13_BOVIN (Mitogen-activated protein kinase kinase kinase 13 OS=Bos taurus GN=MAP3K13 PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 1.904e-11
Identity = 35/109 (32.11%), Postives = 55/109 (50.46%), Query Frame = 1
Query:  292 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKESQCPGILI 618
            E++ EL+ LGSG  G V+ GK+R  +VAIK++++   T               + + L KL HPN++AF GV    P      + E+  +G L  VL +     P +L+
Sbjct:  166 EEISELQWLGSGAQGAVFLGKFRAEEVAIKKVREQNET---------------DIKHLRKLKHPNIIAFKGVCTQAP--CYCIIMEYCAHGQLYEVLRAGRKITPRLLV 257          

HSP 2 Score: 33.4982 bits (75), Expect = 1.904e-11
Identity = 15/31 (48.39%), Postives = 19/31 (61.29%), Query Frame = 3
Query:  651 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIR 743
            A GM YLH   I+H DLK  N+LV   D ++
Sbjct:  264 ASGMNYLHLHKIIHRDLKSPNVLVTHTDAVK 294          
BLAST of DY271293 vs. ExPASy Swiss-Prot
Match: M3K13_MOUSE (Mitogen-activated protein kinase kinase kinase 13 OS=Mus musculus GN=Map3k13 PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 1.904e-11
Identity = 35/109 (32.11%), Postives = 55/109 (50.46%), Query Frame = 1
Query:  292 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKESQCPGILI 618
            E++ EL+ LGSG  G V+ GK+R  +VAIK++++   T               + + L KL HPN++AF GV    P      + E+  +G L  VL +     P +L+
Sbjct:  165 EEISELQWLGSGAQGAVFLGKFRAEEVAIKKVREQNET---------------DIKHLRKLKHPNIIAFKGVCTQAP--CYCIIMEYCAHGQLYEVLRAGRKITPRLLV 256          

HSP 2 Score: 33.4982 bits (75), Expect = 1.904e-11
Identity = 15/31 (48.39%), Postives = 19/31 (61.29%), Query Frame = 3
Query:  651 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIR 743
            A GM YLH   I+H DLK  N+LV   D ++
Sbjct:  263 ASGMNYLHLHKIIHRDLKSPNVLVTHTDAVK 293          
BLAST of DY271293 vs. ExPASy Swiss-Prot
Match: EPHB5_CHICK (Ephrin type-B receptor 5 OS=Gallus gallus GN=EPHB5 PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 2.469e-11
Identity = 46/122 (37.70%), Postives = 61/122 (50.00%), Query Frame = 1
Query:  274 LQIIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKESQCPGILIV--VRGL 633
            +  IK E++    E G   FG + H   R   VAIK +K    +G + EQ R   EF  EA I+ +  HPNV+   GVV       +  VTEFM NGSL   L  KE Q   + +V  +RG+
Sbjct:  634 VSFIKIEEVIGSGEFGEVCFGRLKHPGKREYTVAIKTLK----SGYTDEQRR---EFLSEASIMGQFEHPNVIHLEGVVT--KSRPVMIVTEFMENGSLDSFLRQKEGQFSVLQLVGMLRGI 746          

HSP 2 Score: 31.9574 bits (71), Expect = 2.469e-11
Identity = 18/39 (46.15%), Postives = 20/39 (51.28%), Query Frame = 3
Query:  651 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKGGDF 767
            A GM YL   N VH DL   N+LVN       +CK  DF
Sbjct:  747 AAGMRYLSDMNYVHRDLAARNILVN----SNLVCKVSDF 781          
BLAST of DY271293 vs. ExPASy Swiss-Prot
Match: RMIL_AVEVR (Serine/threonine-protein kinase-transforming protein Rmil OS=Avian rous-associated virus type 1 GN=V-RMIL PE=3 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 2.525e-11
Identity = 54/178 (30.34%), Postives = 76/178 (42.70%), Query Frame = 1
Query:   52 DEGSQRESSSIVGPSTMETHPDYSRSELKGNESLQSEVVNHRIQESDYE-EGRLDLPTAGIPLVDLALGNFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL 582
            D+G + E  S  G S   T P      L   ++LQ      R ++S    E R  + T         LG  D S    I +  +   + +GSG+FGTVY GKW G DVA+K +  +  T +  +       F  E  +L K  H N++ F G         LA VT++    SL H L
Sbjct:   11 DQGVRGEGGSTAGLSA--TPPASLPGSLTNVKALQKSPGPQRERKSSSSSEDRNRMKT---------LGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQ------AFKNEVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEGSSLYHHL 167          

HSP 2 Score: 37.7354 bits (86), Expect = 2.525e-11
Identity = 16/34 (47.06%), Postives = 25/34 (73.53%), Query Frame = 3
Query:  624 KRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVN 725
            K + IA   A GM+YLH+K+I+H DLK +N+ ++
Sbjct:  178 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 211          
BLAST of DY271293 vs. ExPASy Swiss-Prot
Match: DRKC_DICDI (Probable serine/threonine-protein kinase drkC OS=Dictyostelium discoideum GN=drkC PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 3.229e-11
Identity = 39/110 (35.45%), Postives = 55/110 (50.00%), Query Frame = 1
Query:  262 DISTLQIIKNEDLEEL---KELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL 582
            D  TL  IK  D+ E+     +G G+   V+ G WRG  VAIK+ K       + + E    E  +EA I+S+L HPN+  F G   + P   +  V E+M  GSL  +L
Sbjct:  476 DYKTLFEIKPIDISEIVVQNRIGRGSCAEVFTGTWRGIIVAIKKAKLL-----NEDDEDFLNELAQEATIMSQLRHPNICQFLGTCNNPP--EILIVMEYMPLGSLYRIL 578          

HSP 2 Score: 32.3426 bits (72), Expect = 3.229e-11
Identity = 18/40 (45.00%), Postives = 25/40 (62.50%), Query Frame = 3
Query:  612 LDRRKRLIIAMDAAFGMEYLHSKN--IVHFDLKCDNLLVN 725
            LD  +   +A+D A GM YLH  +  ++H DLK  NLLV+
Sbjct:  585 LDWPRMKSMALDIAKGMNYLHCCDPIVIHRDLKSHNLLVD 624          
The following BLAST results are available for this feature:
BLAST of DY271293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
TEC_MOUSE8.804e-1239.62Tyrosine-protein kinase Tec OS=Mus musculus GN=Tec... [more]
Y9863_DICDI1.145e-1134.55Probable serine/threonine-protein kinase DDB_G0281... [more]
BMX_MOUSE1.358e-1141.53Cytoplasmic tyrosine-protein kinase BMX OS=Mus mus... [more]
M3K13_PONAB1.904e-1132.11Mitogen-activated protein kinase kinase kinase 13 ... [more]
M3K13_HUMAN1.904e-1132.11Mitogen-activated protein kinase kinase kinase 13 ... [more]
M3K13_BOVIN1.904e-1132.11Mitogen-activated protein kinase kinase kinase 13 ... [more]
M3K13_MOUSE1.904e-1132.11Mitogen-activated protein kinase kinase kinase 13 ... [more]
EPHB5_CHICK2.469e-1137.70Ephrin type-B receptor 5 OS=Gallus gallus GN=EPHB5... [more]
RMIL_AVEVR2.525e-1130.34Serine/threonine-protein kinase-transforming prote... [more]
DRKC_DICDI3.229e-1135.45Probable serine/threonine-protein kinase drkC OS=D... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YH21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271293 ID=DY271293; Name=DY271293; organism=Citrus clementina; type=EST; length=1004bp
CTAAAGCCTGATGTATCTGTGATGCCTCAGAGTGGGTCACGTATTAATTT
TGATGAGGGCAGTCAGAGAGAGTCATCTAGCATTGTTGGACCCAGCACCA
TGGAAACACATCCAGATTATAGCCGTTCTGAGCTCAAGGGTAATGAGAGC
TTGCAGTCAGAGGTTGTGAACCATAGAATACAGGAATCAGATTATGAGGA
AGGGAGATTGGATCTTCCAACTGCTGGTATACCTCTCGTTGATCTTGCAC
TGGGAAATTTTGATATCAGTACGCTCCAGATTATAAAAAATGAAGATTTG
GAAGAGCTGAAAGAACTGGGTTCTGGCACATTTGGGACTGTTTACCATGG
AAAATGGAGGGGAACAGATGTTGCTATAAAGCGAATAAAAAAGAGTTGTT
TCACTGGTCGTTCATCAGAGCAAGAAAGATTGACTCTGGAGTTCTGGCGT
GAAGCTGAAATTCTTTCTAAGCTCCACCATCCGAATGTGGTGGCCTTTTA
TGGTGTAGTACAAGATGGACCGGGAGGAACGCTGGCTACCGTCACAGAAT
TCATGGTGAATGGCTCTCTTAGACATGTTTTACTTAGCAAAGAGAGTCAA
TGTCCAGGCATCTTGATCGTCGTAAGAGGCTTATTATTGCAATGGATGCG
GCCTTTGGAATGGAATATTTGCATTCAAAGAATATTGTGCATTTTGATTT
GAAGTGTGACAATTTGCTTGTCAACTTGAAGGATCCTATACGACCCATTT
GCAAGGGAGGTGATTTTTGGTTTGGCCAAAATTAAAAGAAAATACCTTGG
TCCCTGGTGGTGGGAGGGGAACCCTTCCATGGAAGGCTCCAAAACCTTTT
GAATGGTAACCACCAGTAAGGGTGCCAAAAAAGGTATGCTTTTTGACCTT
TGATTTTTGACTTTGATAAGGAAAAAACAAAAGTTGGGACCTTGGGTTTA
AAAGGGGAAAAATTGTGGGGGTCCTTTTTGCCAGGGCCTTAATCCAAAAA
TTTA
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