DY271293

Overview
NameDY271293
Unique NameDY271293
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1004
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271293 vs. ExPASy Swiss-Prot
Match: BRAF1_COTJA (B-Raf proto-oncogene serine/threonine-protein kinase OS=Coturnix coturnix japonica GN=BRAF PE=2 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 5.429e-11
Identity = 38/111 (34.23%), Postives = 53/111 (47.75%), Query Frame = 1
Query:  250 LGNFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL 582
            LG  D S    I +  +   + +GSG+FGTVY GKW G DVA+K +  +  T +  +       F  E  +L K  H N++ F G         LA VT++    SL H L
Sbjct:  481 LGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQ------AFKNEVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEGSSLYHHL 581          

HSP 2 Score: 37.7354 bits (86), Expect = 5.429e-11
Identity = 16/34 (47.06%), Postives = 25/34 (73.53%), Query Frame = 3
Query:  624 KRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVN 725
            K + IA   A GM+YLH+K+I+H DLK +N+ ++
Sbjct:  592 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 625          
BLAST of DY271293 vs. ExPASy Swiss-Prot
Match: BRAF1_CHICK (B-Raf proto-oncogene serine/threonine-protein kinase OS=Gallus gallus GN=BRAF PE=1 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 5.429e-11
Identity = 38/111 (34.23%), Postives = 53/111 (47.75%), Query Frame = 1
Query:  250 LGNFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL 582
            LG  D S    I +  +   + +GSG+FGTVY GKW G DVA+K +  +  T +  +       F  E  +L K  H N++ F G         LA VT++    SL H L
Sbjct:  481 LGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQ------AFKNEVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEGSSLYHHL 581          

HSP 2 Score: 37.7354 bits (86), Expect = 5.429e-11
Identity = 16/34 (47.06%), Postives = 25/34 (73.53%), Query Frame = 3
Query:  624 KRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVN 725
            K + IA   A GM+YLH+K+I+H DLK +N+ ++
Sbjct:  592 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 625          
BLAST of DY271293 vs. ExPASy Swiss-Prot
Match: BRAF1_MOUSE (B-Raf proto-oncogene serine/threonine-protein kinase OS=Mus musculus GN=Braf PE=1 SV=2)

HSP 1 Score: 51.2174 bits (121), Expect = 5.429e-11
Identity = 38/111 (34.23%), Postives = 53/111 (47.75%), Query Frame = 1
Query:  250 LGNFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL 582
            LG  D S    I +  +   + +GSG+FGTVY GKW G DVA+K +  +  T +  +       F  E  +L K  H N++ F G         LA VT++    SL H L
Sbjct:  478 LGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQ------AFKNEVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEGSSLYHHL 578          

HSP 2 Score: 37.7354 bits (86), Expect = 5.429e-11
Identity = 16/34 (47.06%), Postives = 25/34 (73.53%), Query Frame = 3
Query:  624 KRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVN 725
            K + IA   A GM+YLH+K+I+H DLK +N+ ++
Sbjct:  589 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 622          
BLAST of DY271293 vs. ExPASy Swiss-Prot
Match: BRAF1_HUMAN (B-Raf proto-oncogene serine/threonine-protein kinase OS=Homo sapiens GN=BRAF PE=1 SV=4)

HSP 1 Score: 51.2174 bits (121), Expect = 5.436e-11
Identity = 38/111 (34.23%), Postives = 53/111 (47.75%), Query Frame = 1
Query:  250 LGNFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL 582
            LG  D S    I +  +   + +GSG+FGTVY GKW G DVA+K +  +  T +  +       F  E  +L K  H N++ F G         LA VT++    SL H L
Sbjct:  441 LGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQ------AFKNEVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEGSSLYHHL 541          

HSP 2 Score: 37.7354 bits (86), Expect = 5.436e-11
Identity = 16/34 (47.06%), Postives = 25/34 (73.53%), Query Frame = 3
Query:  624 KRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVN 725
            K + IA   A GM+YLH+K+I+H DLK +N+ ++
Sbjct:  552 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 585          
BLAST of DY271293 vs. ExPASy Swiss-Prot
Match: RAF1_XENLA (RAF proto-oncogene serine/threonine-protein kinase OS=Xenopus laevis GN=raf1 PE=2 SV=1)

HSP 1 Score: 50.8322 bits (120), Expect = 5.465e-11
Identity = 38/95 (40.00%), Postives = 51/95 (53.68%), Query Frame = 1
Query:  316 LGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSL---RHVLLSK 591
            +GSG+FGTVY GKW G DVA+K +K    T  + EQ +    F  E  +L K  H N++ F G +       LA VT++    SL    HVL +K
Sbjct:  346 IGSGSFGTVYKGKWHG-DVAVKILK---VTDPTPEQLQ---AFRNEVAVLRKTRHVNILLFMGYMTK---DNLAIVTQWCEGSSLYYHLHVLDTK 430          

HSP 2 Score: 38.1206 bits (87), Expect = 5.465e-11
Identity = 15/30 (50.00%), Postives = 23/30 (76.67%), Query Frame = 3
Query:  636 IAMDAAFGMEYLHSKNIVHFDLKCDNLLVN 725
            IA   A GM+YLH+KNI+H D+K +N+ ++
Sbjct:  439 IARQTAQGMDYLHAKNIIHRDMKSNNIFLH 468          
BLAST of DY271293 vs. ExPASy Swiss-Prot
Match: RMIL_AVII1 (Serine/threonine-protein kinase-transforming protein Rmil OS=Avian retrovirus IC10 GN=V-RMIL PE=3 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 5.559e-11
Identity = 38/111 (34.23%), Postives = 53/111 (47.75%), Query Frame = 1
Query:  250 LGNFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL 582
            LG  D S    I +  +   + +GSG+FGTVY GKW G DVA+K +  +  T +  +       F  E  +L K  H N++ F G         LA VT++    SL H L
Sbjct:   51 LGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQ------AFKNEVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEGSSLYHHL 151          

HSP 2 Score: 37.7354 bits (86), Expect = 5.559e-11
Identity = 16/34 (47.06%), Postives = 25/34 (73.53%), Query Frame = 3
Query:  624 KRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVN 725
            K + IA   A GM+YLH+K+I+H DLK +N+ ++
Sbjct:  162 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 195          
BLAST of DY271293 vs. ExPASy Swiss-Prot
Match: ROCO7_DICDI (Probable serine/threonine-protein kinase roco7 OS=Dictyostelium discoideum GN=roco7 PE=3 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 6.829e-11
Identity = 46/152 (30.26%), Postives = 66/152 (43.42%), Query Frame = 1
Query:  118 YSRSELKGNESLQSEVVNHRIQESDYEEGRLDLPTAGIPLVDLALG-NFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSL 570
            Y+   L+   SL    V  + Q        L   T  I +  LA    F+ +   +I  E L+   +LGSG++  VY G W G++VAIK +        ++E+ R   EF  EA I  +L H N V+  GV           VTE +  G L
Sbjct: 1714 YTLDYLENQASLGQTNVICKAQLGGIIHETLSPRTTKIDIYSLAFEVTFNSNKFSVIPYETLKFGPQLGSGSYANVYRGIWNGSEVAIKVLNFDDGHANTTEKYR---EFRNEAHITGELRHANTVSLMGVSL----SPFCLVTELLQYGDL 1858          

HSP 2 Score: 34.6538 bits (78), Expect = 6.829e-11
Identity = 21/48 (43.75%), Postives = 27/48 (56.25%), Query Frame = 3
Query:  630 LIIAMDAAFGMEYLHSKN--IVHFDLKCDNLLVNLKDPIRPICKGGDF 767
            L +A+D A GM +LHS    IVH DLK  N+L+        + K GDF
Sbjct: 1875 LKLAIDVAKGMNFLHSCKPMIVHRDLKSANILLGGSSMDNLVAKVGDF 1922          
BLAST of DY271293 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 9.123e-11
Identity = 38/107 (35.51%), Postives = 57/107 (53.27%), Query Frame = 1
Query:  274 LQIIKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK 591
            +Q+ KN      + LG G FG VYHG  +G++ VA+K + +S   G        + EF  E ++L ++HH N+V+  G   +  G  LA V EF+ NG L+  L  K
Sbjct:  560 VQVTKNFQ----RVLGKGGFGMVYHGTVKGSEQVAVKVLSQSSTQG--------SKEFKAEVDLLLRVHHTNLVSLVGYCCE--GDYLALVYEFLPNGDLKQHLSGK 652          

HSP 2 Score: 33.4982 bits (75), Expect = 9.123e-11
Identity = 17/36 (47.22%), Postives = 26/36 (72.22%), Query Frame = 3
Query:  627 RLIIAMDAAFGMEYLH---SKNIVHFDLKCDNLLVN 725
            RL IA++AA G+EYLH   +  +VH D+K  N+L++
Sbjct:  663 RLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLD 698          
BLAST of DY271293 vs. ExPASy Swiss-Prot
Match: YES_CHICK (Tyrosine-protein kinase Yes OS=Gallus gallus GN=YES1 PE=2 SV=3)

HSP 1 Score: 57.7658 bits (138), Expect = 9.249e-11
Identity = 40/107 (37.38%), Postives = 51/107 (47.66%), Query Frame = 1
Query:  283 IKNEDLEELKELGSGTFGTVYHGKWRG-TDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKESQ 600
            I  E L    +LG G FG V+ G W G T VAIK +K       +         F +EA+I+ KL H  +V  Y VV + P   +  VTEFM  GSL   L   E +
Sbjct:  270 IPRESLRLEVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEA---------FLQEAQIMKKLRHDKLVPLYAVVSEEP---IYIVTEFMTKGSLLDFLKEGEGK 364          

HSP 2 Score: 30.4166 bits (67), Expect = 9.249e-11
Identity = 20/61 (32.79%), Postives = 30/61 (49.18%), Query Frame = 3
Query:  591 RESMSRHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLV--NLKDPIRPICKGGDF 767
            +E   + L   + + +A   A GM Y+   N +H DL+  N+LV  NL      +CK  DF
Sbjct:  359 KEGEGKFLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNL------VCKIADF 413          
BLAST of DY271293 vs. ExPASy Swiss-Prot
Match: Y9865_DICDI (Probable serine/threonine-protein kinase DDB_G0280461 OS=Dictyostelium discoideum GN=DDB_G0280461 PE=3 SV=1)

HSP 1 Score: 45.4394 bits (106), Expect = 9.324e-11
Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 3
Query:  609 HLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKGGDFWFGQ 779
            H+    R+ IA D A GMEYLHSK I+H DLK +NLL+     I+ IC   DF F +
Sbjct:  110 HIPWSLRVKIAKDIAEGMEYLHSKQIMHRDLKSNNLLLGRNWTIK-IC---DFGFAK 162          

HSP 2 Score: 42.743 bits (99), Expect = 9.324e-11
Identity = 34/109 (31.19%), Postives = 47/109 (43.12%), Query Frame = 1
Query:  304 ELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL---HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKESQCPGILIV 621
            E  E   G+F  VY G + G  V +K IKK     + S      +   RE  IL  L    H N++ F G+ +      L  VTE +  G L ++LL  +   P  L V
Sbjct:   16 EENEFSKGSFAKVYKGSYYGNPVCVKVIKKDTLIDKES-----WVFLKREIGILKNLLNQGHKNIIRFIGIGE--KDSLLFLVTELINGGDLGNILLDHKFHIPWSLRV 117          
The following BLAST results are available for this feature:
BLAST of DY271293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
BRAF1_COTJA5.429e-1134.23B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_CHICK5.429e-1134.23B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_MOUSE5.429e-1134.23B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_HUMAN5.436e-1134.23B-Raf proto-oncogene serine/threonine-protein kina... [more]
RAF1_XENLA5.465e-1140.00RAF proto-oncogene serine/threonine-protein kinase... [more]
RMIL_AVII15.559e-1134.23Serine/threonine-protein kinase-transforming prote... [more]
ROCO7_DICDI6.829e-1130.26Probable serine/threonine-protein kinase roco7 OS=... [more]
RLK7_ARATH9.123e-1135.51Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
YES_CHICK9.249e-1137.38Tyrosine-protein kinase Yes OS=Gallus gallus GN=YE... [more]
Y9865_DICDI9.324e-1149.12Probable serine/threonine-protein kinase DDB_G0280... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YH21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271293 ID=DY271293; Name=DY271293; organism=Citrus clementina; type=EST; length=1004bp
CTAAAGCCTGATGTATCTGTGATGCCTCAGAGTGGGTCACGTATTAATTT
TGATGAGGGCAGTCAGAGAGAGTCATCTAGCATTGTTGGACCCAGCACCA
TGGAAACACATCCAGATTATAGCCGTTCTGAGCTCAAGGGTAATGAGAGC
TTGCAGTCAGAGGTTGTGAACCATAGAATACAGGAATCAGATTATGAGGA
AGGGAGATTGGATCTTCCAACTGCTGGTATACCTCTCGTTGATCTTGCAC
TGGGAAATTTTGATATCAGTACGCTCCAGATTATAAAAAATGAAGATTTG
GAAGAGCTGAAAGAACTGGGTTCTGGCACATTTGGGACTGTTTACCATGG
AAAATGGAGGGGAACAGATGTTGCTATAAAGCGAATAAAAAAGAGTTGTT
TCACTGGTCGTTCATCAGAGCAAGAAAGATTGACTCTGGAGTTCTGGCGT
GAAGCTGAAATTCTTTCTAAGCTCCACCATCCGAATGTGGTGGCCTTTTA
TGGTGTAGTACAAGATGGACCGGGAGGAACGCTGGCTACCGTCACAGAAT
TCATGGTGAATGGCTCTCTTAGACATGTTTTACTTAGCAAAGAGAGTCAA
TGTCCAGGCATCTTGATCGTCGTAAGAGGCTTATTATTGCAATGGATGCG
GCCTTTGGAATGGAATATTTGCATTCAAAGAATATTGTGCATTTTGATTT
GAAGTGTGACAATTTGCTTGTCAACTTGAAGGATCCTATACGACCCATTT
GCAAGGGAGGTGATTTTTGGTTTGGCCAAAATTAAAAGAAAATACCTTGG
TCCCTGGTGGTGGGAGGGGAACCCTTCCATGGAAGGCTCCAAAACCTTTT
GAATGGTAACCACCAGTAAGGGTGCCAAAAAAGGTATGCTTTTTGACCTT
TGATTTTTGACTTTGATAAGGAAAAAACAAAAGTTGGGACCTTGGGTTTA
AAAGGGGAAAAATTGTGGGGGTCCTTTTTGCCAGGGCCTTAATCCAAAAA
TTTA
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