DY271304

Overview
NameDY271304
Unique NameDY271304
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length813
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271304 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.410e-18
Identity = 48/135 (35.56%), Postives = 77/135 (57.04%), Query Frame = 2
Query:   17 WNARVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIITGRNPVDYSRPQGEVNLVDWLKTMVGSRKSEEVVDPKLPKMPASKALKRVLLVALRCVDPDATKRPKMGHVIHMLE 421
            + A+VSDFG ++ +  +++++TT V GTFGY+ PEY  T    +KSDVYSFG++++E+ITG  P    RP+    LV      +   +  ++VD ++ +    + +  V  +A RC+     KRP M  V   LE
Sbjct:  558 YRAKVSDFGTSRSINVDQTHLTTLVAGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELITGEKPFSVMRPEENRGLVSHFNEAMKQNRVLDIVDSRIKEGCTLEQVLAVAKLARRCLSLKGKKRPNMREVSVELE 692          
BLAST of DY271304 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.410e-18
Identity = 50/133 (37.59%), Postives = 84/133 (63.16%), Query Frame = 2
Query:   29 VSDFGLAKLLCS-ERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIITGRNPVDYSRPQGEVNLVDWLKTMVGSRKSEEVVDPKLPKMPASKA--LKRVLLVALRCVDPDATKRPKMGHVIHML 418
            + DFGLAKL+   + +  +  + G++GY+APEY  +  + EKSDVYS+G++++E++TG+ P+D + P G +++VDW+K +    +  +V+D  L   P S+   + + L VAL C++P    RP M  V  ML
Sbjct:  936 IGDFGLAKLVDDGDFARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDG-LHIVDWVKKI----RDIQVIDQGLQARPESEVEEMMQTLGVALLCINPIPEDRPTMKDVAAML 1063          
BLAST of DY271304 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.841e-18
Identity = 47/133 (35.34%), Postives = 79/133 (59.40%), Query Frame = 2
Query:   23 ARVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIITGRNPVDYSRPQGEVNLVDWLKTMVGSRKSEEVVDPKLPKMPASKALKRVLLVALRCVDPDATKRPKMGHVIHMLE 421
            A+VSDFGL+K    +  +V+T V G+FGY+ PEY     L +KSDVYSFG+++ E++  R  ++   P+ +VNL ++   +      E+++DPK+    +  +L++ +  A +C+      RP MG V+  LE
Sbjct:  669 AKVSDFGLSKDAPMDEGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVINPQLPREQVNLAEYAMNLHRKGMLEKIIDPKIVGTISKGSLRKFVEAAEKCLAEYGVDRPGMGDVLWNLE 801          
BLAST of DY271304 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.841e-18
Identity = 44/135 (32.59%), Postives = 84/135 (62.22%), Query Frame = 2
Query:   17 WNARVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIITGRNPVDYSRPQGEVNLVDWLKTMVGSRKSEEVVDPKLPKMPASKALKRVLLVALRCVDPDATKRPKMGHVIHMLE 421
            + A ++DFGLA+LL    ++VTT ++GT GY+ PEY+ + +   + DVYSFG++++E++TGR PV+  + +   +LV  +  M   ++  E++D  + +    + +  +L +A +C+D +  +RP +  V+  LE
Sbjct:  892 FEAHLADFGLARLLRPYDTHVTTDLVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGRRPVEVCKGKSCRDLVSRVFQMKAEKREAELIDTTIRENVNERTVLEMLEIACKCIDHEPRRRPLIEEVVTWLE 1026          
BLAST of DY271304 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.405e-18
Identity = 47/133 (35.34%), Postives = 78/133 (58.65%), Query Frame = 2
Query:   23 ARVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIITGRNPVDYSRPQGEVNLVDWLKTMVGSRKSEEVVDPKLPKMPASKALKRVLLVALRCVDPDATKRPKMGHVIHMLE 421
            A+V+DFGL+K +   +++V+T V G+FGY+ PEY     L +KSDVYSFG++++E +  R  ++   P+ +VNL +W          E+++DP L      +++K+    A +C+      RP MG V+  LE
Sbjct:  663 AKVADFGLSKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAEWAMLWKQKGLLEKIIDPHLVGAVNPESMKKFAEAAEKCLADYGVDRPTMGDVLWNLE 795          
BLAST of DY271304 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.405e-18
Identity = 45/135 (33.33%), Postives = 80/135 (59.26%), Query Frame = 2
Query:   17 WNARVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIITGRNPVDYSRPQGEVNLVDWLKTMVGSRKSEEVVDPKLPKMPASKALKRVLLVALRCVDPDATKRPKMGHVIHMLE 421
            + A++SDFG ++ + ++++++TT V GTFGY+ PEY  +     KSDVYSFG++++E+ITG  P+   R +  + L  +    +   ++ +++D ++     SK +  V  +A RC++    KRP M  V   LE
Sbjct:  565 YRAKISDFGTSRSVATDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPMSRVRSEEGIGLATYFLEAMKENRAVDIIDIRI--KDESKQVMAVAKLARRCLNRKGNKRPNMREVSIKLE 697          
BLAST of DY271304 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.405e-18
Identity = 51/135 (37.78%), Postives = 78/135 (57.78%), Query Frame = 2
Query:   20 NARVSDFGLAKLLCSERSYVTT-RVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIITGRNPVDYSRPQGEV-NLVDWLKTMVGSRKSEEVVDPKLPKMPASKALKRVLLVALRCVDPDATKRPKMGHVIHML 418
            N +++DFG+A+    +++  TT RV+GTFGY+ PEY   G  + KSDVYSFG+LI+EII G+    +    G V NLV ++  +  +    E+VDP + +      + R + ++L CV  +   RP M  V  ML
Sbjct:  473 NPKIADFGVARNFRVDQTEATTGRVVGTFGYMPPEYVANGQFSMKSDVYSFGVLILEIIVGKKSSSFHEIDGSVGNLVTYVWRLWNNESFLELVDPAMGESYDKDEVIRCIHISLLCVQENPADRPTMSTVFQML 607          
BLAST of DY271304 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.140e-18
Identity = 48/133 (36.09%), Postives = 80/133 (60.15%), Query Frame = 2
Query:   17 WNARVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIITGRNPVDYSRPQGEVNLVDWLKTMVGSRKSEEVVDPKLPKMPASKALKRVLLV---ALRCVDPDATKRPKMGHV 406
            +N +V+DFGL++L   ++++V+T   GT GYV P+Y     L+ KSDVYSF +++ME+I+    VD +RP+ E+NL +     + + +  ++VDP L     ++  + V+ V   A +C+  D   RP M HV
Sbjct:  480 FNVKVADFGLSRLFPMDKTHVSTAPQGTPGYVDPDYHLCYQLSNKSDVYSFAVVLMELISSLPAVDITRPRQEINLSNMAVVKIQNHELRDMVDPSLGFDTDTRVRQTVIAVAELAFQCLQSDKDLRPCMSHV 612          
BLAST of DY271304 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.140e-18
Identity = 58/189 (30.69%), Postives = 98/189 (51.85%), Query Frame = 2
Query:   23 ARVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIITGRNPVDYSRPQGEVNLVDWLKTMVGSRKSEEVVDPKLPKMPASKALKRVLLVALRCVDPDATKRPKMGHVIHMLEADDLLFRDERRIGREPSNSYGEENRDFAR-KVGDKQLGEGASDTSEGDGSRNNHRP 586
            A+VSDFGL++    + ++V++   GT GY+ PEY  +  L EKSDVYSFG+++ E+++G+ PV       E+N+V W ++++       ++DP +      +++ RV  VA +CV+     RP+M  VI       +  +D  RI R   N     +   ++ +   K L     +    D SRN+  P
Sbjct:  745 AKVSDFGLSRQTEEDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNIVHWARSLIRKGDVCGIIDPCIASNVKIESVWRVAEVANQCVEQRGHNRPRMQEVI-------VAIQDAIRIERGNENGLKSSSSSSSKAQSSRKTLLTSFLELESPDISRNSLAP 926          
BLAST of DY271304 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.140e-18
Identity = 48/142 (33.80%), Postives = 83/142 (58.45%), Query Frame = 2
Query:   20 NARVSDFGLAKLL-----CSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIITGRNPVDYSRPQGEVNLVDWLKTMVGSRKSEEVVDPKLPKMPAS---KALKRVLLVALRCVDPDATKRPKMGHVIHMLE 421
            NA+VSDFGL++L+      +  S++ T   GT GY+ PEY     L +KSDVYSFG++++E++T +  +D++R + +VNLV ++  M+   +  E +DP L K       + ++++  +A  C++     RP M  V   +E
Sbjct:  503 NAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTREEEDVNLVMYINKMMDQERLTECIDPLLKKTANKIDMQTIQQLGNLASACLNERRQNRPSMKEVADEIE 644          
The following BLAST results are available for this feature:
BLAST of DY271304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 224
Match NameE-valueIdentityDescription
WAKLI_ARATH1.410e-1835.56Wall-associated receptor kinase-like 22 OS=Arabido... [more]
RCH1_ARATH1.410e-1837.59LRR receptor-like serine/threonine-protein kinase ... [more]
Y5613_ARATH1.841e-1835.34Probable receptor-like protein kinase At5g61350 OS... [more]
PSKR2_ARATH1.841e-1832.59Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
Y2214_ARATH2.405e-1835.34Probable receptor-like protein kinase At2g21480 OS... [more]
WAKLC_ARATH2.405e-1833.33Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
CRK16_ARATH2.405e-1837.78Putative cysteine-rich receptor-like protein kinas... [more]
Y1839_ARATH3.140e-1836.09Probable serine/threonine-protein kinase At1g18390... [more]
Y1677_ARATH3.140e-1830.69Probable LRR receptor-like serine/threonine-protei... [more]
WAKLQ_ARATH3.140e-1833.80Wall-associated receptor kinase-like 20 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YI11FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271304 ID=DY271304; Name=DY271304; organism=Citrus clementina; type=EST; length=813bp
CTACTTGATCGCTTTATGGAATGCTAGGGTTTCTGATTTTGGGCTTGCTA
AGCTTTTATGTTCAGAGAGGAGTTATGTAACAACCCGTGTGATGGGAACG
TTTGGTTATGTTGCACCAGAGTATGCATGCACTGGGATGCTGAATGAGAA
GAGTGATGTTTATAGTTTTGGTATACTTATAATGGAGATAATTACTGGGA
GAAATCCTGTTGATTATAGTCGACCACAAGGAGAGGTGAATTTGGTTGAT
TGGTTAAAAACCATGGTTGGGAGTCGAAAATCTGAGGAGGTAGTTGATCC
TAAACTGCCCAAGATGCCTGCTTCTAAAGCACTTAAACGTGTTCTGTTGG
TTGCTCTGCGATGTGTGGATCCTGATGCAACAAAGAGGCCCAAAATGGGG
CATGTAATACACATGCTTGAGGCAGATGACTTGTTATTTCGTGATGAACG
TCGAATCGGAAGAGAACCTTCAAACTCATATGGTGAAGAGAATCGTGATT
TTGCAAGAAAAGTAGGTGATAAACAATTGGGTGAAGGCGCTTCGGATACA
AGTGAAGGTGATGGCAGTAGGAACAATCATCGACCAACCATGCGGCGATA
GCACCAGCAGAGAATTAGGTGACTAATTATTATCGTCTCCACTTTGGAAA
GTTTGCTTTTCTTATTCTATTATTTAGATTTCTTCTTGTACCCTTAAATC
AAAAATACCTATGATTTGCAAATTCTTTTACATAAATATTTTTTTTCTTT
TTTTCAGTTTTACATTCCCCCAATTGGGGATGCTTTTTGATAATTTTAAA
AAATTCTTTCCAT
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