DY271323
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: RH6_ARATH (DEAD-box ATP-dependent RNA helicase 6 OS=Arabidopsis thaliana GN=RH6 PE=2 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 4.842e-31 Identity = 80/217 (36.87%), Postives = 123/217 (56.68%), Query Frame = 2 Query: 119 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 766 Q D ATK N F D+ LK +LLR I + GFE PS +Q E IP A+ G D++ +AK+G GKT F + TL++ +P + A++L TRELA Q + S YL I+V V GG +++ D+++ P ++VGTPGRIL LA+ LK+ ++DE DK+L S++ + ++E+ + P +Q++MFSAT ++ Sbjct: 144 QTEDVTATKGNE--------------FEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEKIDPENNVIQAVILVPTRELALQTSQVCKELSKYL-KIEVMVTTGGTSLR--DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLL-SVEFQPSIEELIQFLPESRQILMFSATFPVTVK 342
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: IF4A_ASPFU (ATP-dependent RNA helicase eIF4A OS=Aspergillus fumigatus GN=tif1 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 6.324e-31 Identity = 80/191 (41.88%), Postives = 112/191 (58.64%), Query Frame = 2 Query: 212 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKF 784 LKPELLR + GFE PS +Q I I G DVI QA+SG GKTA F +S LQ+ +PN AL+L TRELA QI ++ +I+ GG N++ L+ E PQ+VVGTPGR+ + + + L N++ FILDE D+ML S + +IF++ P QV++ SAT+ +++ V KF Sbjct: 32 LKPELLRGVYAYGFERPSAIQQRAILPIIKGNDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFM-NIECHACIGGTNVREDMKALQ-EGPQVVVGTPGRVQDMIQRRVLRTDNLKMFILDEADEML-SRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKF 219
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: DHH1_CANGA (ATP-dependent RNA helicase DHH1 OS=Candida glabrata GN=DHH1 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 6.324e-31 Identity = 76/193 (39.38%), Postives = 112/193 (58.03%), Query Frame = 2 Query: 191 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 766 + F DF LK ELL I ++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL++ +P ++ AL++ TRELA Q + + V GG N++ D+L+ NE ++VGTPGR+L LA K L F++DE DKML S D + ++++ P Q ++FSAT ++ Sbjct: 31 NSFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKIKPKLNKIQALIMVPTRELALQTSQVIRTLGRHC-GVSCMVTTGGTNLR--DDILRLNETVHVLVGTPGRVLDLASRKVADLSECSLFVMDEADKML-SRDFKTIIEQVLTFLPKAHQSLLFSATFPLTVK 219
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: DHH1_GIBZE (ATP-dependent RNA helicase DHH1 OS=Gibberella zeae GN=DHH1 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 8.260e-31 Identity = 78/196 (39.80%), Postives = 115/196 (58.67%), Query Frame = 2 Query: 197 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQK 781 F +F LK +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ P ++ L+L TRELA Q + +L I V V GG ++ D+++ + P IVVGTPGRIL LA L FI+DE DK+L S++ ++++ + P D+QVM+FSAT ++ K Sbjct: 44 FENFALKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKISKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTGLR--DDIIRLQDPVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLL-SIEFTPVIEQLLQFHPKDRQVMLFSATFPLSVKDFSDK 235
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: DHH1_CHAGB (ATP-dependent RNA helicase DHH1 OS=Chaetomium globosum GN=DHH1 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 8.260e-31 Identity = 78/196 (39.80%), Postives = 116/196 (59.18%), Query Frame = 2 Query: 197 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQK 781 F DF LK +LL I ++GFE PS +Q E IP A++G D++ +AK+G GKTA FV+ L++ P ++ L+L TRELA Q + +L I V V GG ++ D+++ + P IVVGTPGRIL LA + L FI+DE DK+L S++ ++++ + P D+QVM+FSAT ++ K Sbjct: 13 FEDFGLKRDLLMGIFEAGFEKPSPIQEESIPVALVGRDILARAKNGTGKTAAFVIPALEKINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTGLR--DDIVRLQDPVHIVVGTPGRILDLAGKQVADLSECPMFIMDEADKLL-SIEFTPVIEQLLRFHPKDRQVMLFSATFPISVKDFSDK 204
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: DHH1_VANPO (ATP-dependent RNA helicase DHH1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DHH1 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.409e-30 Identity = 78/191 (40.84%), Postives = 111/191 (58.12%), Query Frame = 2 Query: 197 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 766 F DF LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ + ++ AL++ TRELA Q + I V GG N++ D+L+ NE I+VGTPGR+L LA K L FI+DE DKML S D + +++I P + Q ++FSAT ++ Sbjct: 36 FEDFYLKRELLMGIFEAGFEKPSPIQEESIPVALAGRDILARAKNGTGKTAAFVIPTLEKVKSKHNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLR--DDILRLNETVHILVGTPGRVLDLASRKVADLSECNLFIMDEADKML-SRDFKSIIEQILVFLPKNHQSLLFSATFPLSVK 222
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: DHH1_PICST (ATP-dependent RNA helicase DHH1 OS=Pichia stipitis GN=DHH1 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.409e-30 Identity = 78/196 (39.80%), Postives = 116/196 (59.18%), Query Frame = 2 Query: 197 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQK 781 F DF LK ELL I ++GFE PS +Q E IP A+ G DV+ +AK+G GKTA F++ +LQQ +P ++ AL+L TRELA Q +L I+ V GG ++K D+L+ N+ ++VGTPGR+L LA L F++DE DKML S + + +++I + P ++Q ++FSAT ++ K Sbjct: 32 FEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDVLARAKNGTGKTASFIIPSLQQIKPKLNKIQALILVPTRELALQTSQVVRTLGKHL-GIQCMVTTGGTSLK--DDILRLNDPVHVLVGTPGRVLDLAARSVADLSECPLFVMDEADKML-SREFKGIIEQILEFFPKNRQSLLFSATFPLAVKSFMDK 223
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: DHH1_KLULA (ATP-dependent RNA helicase DHH1 OS=Kluyveromyces lactis GN=DHH1 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.409e-30 Identity = 78/191 (40.84%), Postives = 112/191 (58.64%), Query Frame = 2 Query: 197 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 766 F DF LK ELL I ++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL++ +P ++ AL++ TRELA Q + I V GG N++ D+++ NE I+VGTPGR+L LA + L FI+DE DKML S D + ++I P +Q+++FSAT ++ Sbjct: 38 FEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAIAGKDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLR--DDIMRLNEPVHILVGTPGRVLDLASRRVTDLSECHLFIMDEADKML-SRDFKVLAEQILGFLPERRQLLLFSATFPVTVK 224
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: DHH1_CRYNE (ATP-dependent RNA helicase DHH1 OS=Cryptococcus neoformans GN=DHH1 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.840e-30 Identity = 74/187 (39.57%), Postives = 112/187 (59.89%), Query Frame = 2 Query: 191 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSAT 748 S F DF L+ ELL I +GFE PS +Q + IP A+ G D++ +AK+G GKTA F++ TL + + + AL+L TRELA Q + ++P+++V + GG ++ D+L+ + P I+VGTPGRIL L SL F++DE DK+L S D +++ + P ++QVM+FSAT Sbjct: 36 SRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTLR--DDILRLQQPVHILVGTPGRILDLGSKGIASLNKCGVFVMDEADKLL-SEDFMPVIEQTLALCPQERQVMLFSAT 219
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: DHH1_COCIM (ATP-dependent RNA helicase DHH1 OS=Coccidioides immitis GN=DHH1 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.840e-30 Identity = 81/209 (38.76%), Postives = 117/209 (55.98%), Query Frame = 2 Query: 125 PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSAT 748 P T+ A KG F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++T P + AL+L TRELA Q + +L I V V GG ++ D+++ ++ I+VGTPGRIL LA L F++DE DK+L S + ++++ P D+QVM+FSAT Sbjct: 31 PKDTRTQTEDVTATKGLE------FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERTNPKISKTQALILVPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGLQ--DDIIRLSDTVHIIVGTPGRILDLASKGVADLSECTTFVMDEADKLL-SPEFTPVIEQLLSFHPKDRQVMLFSAT 229 The following BLAST results are available for this feature:
BLAST of DY271323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY271323 ID=DY271323; Name=DY271323; organism=Citrus clementina; type=EST; length=1061bpback to top |