DY271323
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: IF4A2_PONAB (Eukaryotic initiation factor 4A-II OS=Pongo abelii GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 2.034e-29 Identity = 83/196 (42.35%), Postives = 107/196 (54.59%), Query Frame = 2 Query: 197 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKF 784 F D LK LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI Y+ A GG N++ L+ E P IVVGTPGR+ + + LS K ++ F+LDE D+ML S + + EIF+ QV++ SAT+ ++ V +KF Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEML-SRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKF 228
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: IF4A2_MOUSE (Eukaryotic initiation factor 4A-II OS=Mus musculus GN=Eif4a2 PE=2 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 2.034e-29 Identity = 83/196 (42.35%), Postives = 107/196 (54.59%), Query Frame = 2 Query: 197 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKF 784 F D LK LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI Y+ A GG N++ L+ E P IVVGTPGR+ + + LS K ++ F+LDE D+ML S + + EIF+ QV++ SAT+ ++ V +KF Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEML-SRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKF 228
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: IF4A2_HUMAN (Eukaryotic initiation factor 4A-II OS=Homo sapiens GN=EIF4A2 PE=1 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 2.034e-29 Identity = 83/196 (42.35%), Postives = 107/196 (54.59%), Query Frame = 2 Query: 197 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKF 784 F D LK LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI Y+ A GG N++ L+ E P IVVGTPGR+ + + LS K ++ F+LDE D+ML S + + EIF+ QV++ SAT+ ++ V +KF Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEML-SRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKF 228
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: IF4A2_BOVIN (Eukaryotic initiation factor 4A-II OS=Bos taurus GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 2.034e-29 Identity = 83/196 (42.35%), Postives = 107/196 (54.59%), Query Frame = 2 Query: 197 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKF 784 F D LK LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI Y+ A GG N++ L+ E P IVVGTPGR+ + + LS K ++ F+LDE D+ML S + + EIF+ QV++ SAT+ ++ V +KF Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEML-SRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKF 228
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: FAL1_KLULA (ATP-dependent RNA helicase FAL1 OS=Kluyveromyces lactis GN=FAL1 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 2.034e-29 Identity = 78/200 (39.00%), Postives = 115/200 (57.50%), Query Frame = 2 Query: 188 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKF 784 S+ F LKP+LLR I GFE+PS +Q I Q I G DVI QA+SG GKTA F + LQ + ++ ALVL TRELA Q YL ++ GG ++ + C Q+V GTPGR+L + + + L+++N + +LDE D++L E+L ++ + +IF P QV++ SAT+SK+I + +KF Sbjct: 22 SATFESMNLKPDLLRGIYFYGFEYPSSIQSRAISQIISGKDVIAQAQSGTGKTATFTIGLLQAIDSKSKELQALVLSPTRELASQSESVISNLGDYL-NVTAHACTGGKALQQDIKKVSKNC-QVVSGTPGRVLDMIKRQVLNVRNCKILVLDEADELLGETLGFKQQIYDIFTKLPPTIQVVVVSATMSKDILEITKKF 219
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: IF4A_ASPOR (ATP-dependent RNA helicase eIF4A OS=Aspergillus oryzae GN=tif1 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.657e-29 Identity = 77/191 (40.31%), Postives = 109/191 (57.07%), Query Frame = 2 Query: 212 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKF 784 LKPELLR + GFE PS +Q I I G DVI QA+SG GKTA F +S LQ+ +PN AL+L TRELA QI ++ +I GG ++ L E P++VVGTPGR+ + + + L +++ FILDE D+ML S + +IF++ P QV++ SAT+ +++ V KF Sbjct: 55 LKPELLRGVYAYGFERPSAIQQRAIKPIIKGSDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFM-NITCHACIGGTAVREDMKAL-GEGPEVVVGTPGRVHDMIQRRVLKTDHLKQFILDEADEML-SRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKF 242
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: FAL1_VANPO (ATP-dependent RNA helicase FAL1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=FAL1 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.657e-29 Identity = 81/200 (40.50%), Postives = 113/200 (56.50%), Query Frame = 2 Query: 188 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKF 784 S F LK +LLR I GFE PS +Q I Q I G DVI QA+SG GKTA F + LQ + + ALVL TRELA QI Y+ +++ GG +K + ++ Q+V GTPGR+L + + L+ +NV+ ILDE D++L ESL ++ + +IF P QV++ SAT+SK+I V +KF Sbjct: 22 SPTFESMNLKDDLLRGIYGYGFEAPSAIQSRAITQIISGTDVIAQAQSGTGKTATFTIGMLQAIDLKRKDLQALVLSPTRELASQINQVVSNLGDYM-NVQSYAMTGGKTMKDDLNRMQKNGCQVVSGTPGRVLDMFKRHLLNTRNVQMLILDEADELLGESLGFKQQIYDIFTKLPAACQVVVVSATMSKDILEVTKKF 220
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: DHH1_ASHGO (ATP-dependent RNA helicase DHH1 OS=Ashbya gossypii GN=DHH1 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.657e-29 Identity = 75/191 (39.27%), Postives = 110/191 (57.59%), Query Frame = 2 Query: 197 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 766 F DF L+ ELL I ++GFE PS +Q E IP A+ D++ +AK+G GKTA FV+ TL+ +P ++ AL++ TRELA Q + I V GG N++ D+++ NE ++VGTPGR+L LA K L F++DE DKML S D + V++I P + Q ++FSAT ++ Sbjct: 31 FEDFYLRRELLMGIFEAGFERPSPIQEEAIPIALARRDILARAKNGTGKTAAFVIPTLEIVKPKVNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLR--DDIMRLNEPVHVLVGTPGRVLDLASRKVADLSECSLFVMDEADKML-SRDFKSLVEQILSFLPQNHQSLLFSATFPLTVK 217
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: IF4A1_RABIT (Eukaryotic initiation factor 4A-I (Fragment) OS=Oryctolagus cuniculus GN=EIF4A1 PE=1 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 3.470e-29 Identity = 79/196 (40.31%), Postives = 106/196 (54.08%), Query Frame = 2 Query: 197 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKF 784 F D L LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI Y+ GG N++ L+ E P I+VGTPGR+ + + LS K ++ F+LDE D+ML S + + +IF+ + QV++ SAT+ ++ V +KF Sbjct: 26 FDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYM-GASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEML-SRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKF 219
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: IF4A1_PANTR (Eukaryotic initiation factor 4A-I OS=Pan troglodytes GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 3.470e-29 Identity = 79/196 (40.31%), Postives = 106/196 (54.08%), Query Frame = 2 Query: 197 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKF 784 F D L LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI Y+ GG N++ L+ E P I+VGTPGR+ + + LS K ++ F+LDE D+ML S + + +IF+ + QV++ SAT+ ++ V +KF Sbjct: 34 FDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYM-GASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEML-SRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKF 227 The following BLAST results are available for this feature:
BLAST of DY271323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271323 ID=DY271323; Name=DY271323; organism=Citrus clementina; type=EST; length=1061bpback to top |