DY271326

Overview
NameDY271326
Unique NameDY271326
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length937
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271326 vs. ExPASy Swiss-Prot
Match: BETB_ECOLI (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=betB PE=1 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 2.899e-21
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 2
Query:  173 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEGFEREQLPGAIFTSFCG-GAEISQAIAKEPRISLGFFSGNYKGG 823
            G T  +INPAN   +ATV  A  ED +  +K+  +  KIW  + A +R  ++R+  D LRE+   L +L +++ GK   E    ++    D+ ++  GL   L GS IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K             ++ SE      LP  +F    G GAE  Q + + P I+   F+G    G
Sbjct:   21 GRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWASMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPL-RETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEA----GLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASG 234          
BLAST of DY271326 vs. ExPASy Swiss-Prot
Match: BETB_ECOL5 (Betaine aldehyde dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.899e-21
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 2
Query:  173 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEGFEREQLPGAIFTSFCG-GAEISQAIAKEPRISLGFFSGNYKGG 823
            G T  +INPAN   +ATV  A  ED +  +K+  +  KIW  + A +R  ++R+  D LRE+   L +L +++ GK   E    ++    D+ ++  GL   L GS IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K             ++ SE      LP  +F    G GAE  Q + + P I+   F+G    G
Sbjct:   21 GHTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPSLEGSQIPL-RETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEA----GLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASG 234          
BLAST of DY271326 vs. ExPASy Swiss-Prot
Match: BETB_ECODH (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain K12 / DH10B) GN=betB PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.899e-21
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 2
Query:  173 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEGFEREQLPGAIFTSFCG-GAEISQAIAKEPRISLGFFSGNYKGG 823
            G T  +INPAN   +ATV  A  ED +  +K+  +  KIW  + A +R  ++R+  D LRE+   L +L +++ GK   E    ++    D+ ++  GL   L GS IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K             ++ SE      LP  +F    G GAE  Q + + P I+   F+G    G
Sbjct:   21 GRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWASMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPL-RETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEA----GLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASG 234          
BLAST of DY271326 vs. ExPASy Swiss-Prot
Match: BETB_ECO7I (Betaine aldehyde dehydrogenase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.899e-21
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 2
Query:  173 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEGFEREQLPGAIFTSFCG-GAEISQAIAKEPRISLGFFSGNYKGG 823
            G T  +INPAN   +ATV  A  ED +  +K+  +  KIW  + A +R  ++R+  D LRE+   L +L +++ GK   E    ++    D+ ++  GL   L GS IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K             ++ SE      LP  +F    G GAE  Q + + P I+   F+G    G
Sbjct:   21 GRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPL-RETSFVYTRHEPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEA----GLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASG 234          
BLAST of DY271326 vs. ExPASy Swiss-Prot
Match: BETB_ECO5E (Betaine aldehyde dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=betB PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.899e-21
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 2
Query:  173 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEGFEREQLPGAIFTSFCG-GAEISQAIAKEPRISLGFFSGNYKGG 823
            G T  +INPAN   +ATV  A  ED +  +K+  +  KIW  + A +R  ++R+  D LRE+   L +L +++ GK   E    ++    D+ ++  GL   L GS IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K             ++ SE      LP  +F    G GAE  Q + + P I+   F+G    G
Sbjct:   21 GRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPSLEGSQIPL-RETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEA----GLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASG 234          
BLAST of DY271326 vs. ExPASy Swiss-Prot
Match: BETB_ECO57 (Betaine aldehyde dehydrogenase OS=Escherichia coli O157:H7 GN=betB PE=3 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 2.899e-21
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 2
Query:  173 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEGFEREQLPGAIFTSFCG-GAEISQAIAKEPRISLGFFSGNYKGG 823
            G T  +INPAN   +ATV  A  ED +  +K+  +  KIW  + A +R  ++R+  D LRE+   L +L +++ GK   E    ++    D+ ++  GL   L GS IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K             ++ SE      LP  +F    G GAE  Q + + P I+   F+G    G
Sbjct:   21 GRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPSLEGSQIPL-RETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEA----GLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASG 234          
BLAST of DY271326 vs. ExPASy Swiss-Prot
Match: BETB_ECO24 (Betaine aldehyde dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=betB PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.899e-21
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 2
Query:  173 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEGFEREQLPGAIFTSFCG-GAEISQAIAKEPRISLGFFSGNYKGG 823
            G T  +INPAN   +ATV  A  ED +  +K+  +  KIW  + A +R  ++R+  D LRE+   L +L +++ GK   E    ++    D+ ++  GL   L GS IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K             ++ SE      LP  +F    G GAE  Q + + P I+   F+G    G
Sbjct:   21 GRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPSLEGSQIPL-RETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEA----GLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASG 234          
BLAST of DY271326 vs. ExPASy Swiss-Prot
Match: BETB_SHIF8 (Betaine aldehyde dehydrogenase OS=Shigella flexneri serotype 5b (strain 8401) GN=betB PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.786e-21
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 2
Query:  173 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEGFEREQLPGAIFTSF-CGGAEISQAIAKEPRISLGFFSGNYKGG 823
            G T  +INPAN   +ATV  A  ED +  +K+  +  KIW  + A +R  ++R+  D LRE+   L +L +++ GK   E    ++    D+ ++  GL   L GS IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K             ++ SE      LP  +F     GGAE  Q + + P I+   F+G    G
Sbjct:   21 GRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPL-RETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEA----GLPDGVFNVLPGGGAETGQYLTEHPGIAKVSFTGGVASG 234          
BLAST of DY271326 vs. ExPASy Swiss-Prot
Match: BETB_ECOSM (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=betB PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.786e-21
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 2
Query:  173 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEGFEREQLPGAIFTSFCG-GAEISQAIAKEPRISLGFFSGNYKGG 823
            G T  +INPAN   +ATV  A  ED +  +K+  +  KIW  + A +R  ++R+  D LRE+   L +L +++ GK   E    ++    D+ ++  GL   L GS IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K             ++ SE      LP  +F    G GAE  Q + + P I+   F+G    G
Sbjct:   21 GRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPL-RETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEA----GLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASG 234          
BLAST of DY271326 vs. ExPASy Swiss-Prot
Match: BETB_ECOHS (Betaine aldehyde dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=betB PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.786e-21
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 2
Query:  173 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEGFEREQLPGAIFTSFCG-GAEISQAIAKEPRISLGFFSGNYKGG 823
            G T  +INPAN   +ATV  A  ED +  +K+  +  KIW  + A +R  ++R+  D LRE+   L +L +++ GK   E    ++    D+ ++  GL   L GS IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K             ++ SE      LP  +F    G GAE  Q + + P I+   F+G    G
Sbjct:   21 GRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPL-RETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEA----GLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASG 234          
The following BLAST results are available for this feature:
BLAST of DY271326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 363
Match NameE-valueIdentityDescription
BETB_ECOLI2.899e-2131.05Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOL52.899e-2131.05Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECODH2.899e-2131.05Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO7I2.899e-2131.05Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO5E2.899e-2131.05Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO572.899e-2131.05Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO242.899e-2131.05Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_SHIF83.786e-2131.05Betaine aldehyde dehydrogenase OS=Shigella flexner... [more]
BETB_ECOSM3.786e-2131.05Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOHS3.786e-2131.05Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YJ20FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271326 ID=DY271326; Name=DY271326; organism=Citrus clementina; type=EST; length=937bp
GTAAAAAACAATTTTTTTTTTGTCTGGGTTCTGTTTGTTAGCTGAGATAA
TTCGGGAAAGGAGCGTAATTGATCAGATGGAATTTGCAAAGCAAGAGTAC
GAGTTTCTGAGTGAGATCGGCTTAAGTCCAGAAACTCCTGGATGTTTTGT
GAATGGCAAGTGGAAGGCACATGGTCCTACTGTCTCCTCTATCAATCCTG
CTAACAATCAGAAAATTGCTACTGTTGTGGAGGCTTCACTTGAGGATTAT
GAGGAAGGCATGAAAGCTTGCAGCGAAGCATCTAAGATATGGATGGAACT
TCCAGCTCCTAAGAGAGGGGAGGTTGTTAGACAAATAGGTGATGCATTGA
GAGAAAAACTGCATCATCTCGGCCGTCTTCTTTCAATTGAGATGGGAAAA
ATTCTTCCAGAAGGAATTGGGGAAGTCCAAGAAGTTATTGACATGTGTGA
TTTTGCTGTGGGTTTAAGCCGGCAACTTAATGGATCAGTAATACCTTCAG
AACGTCCCAATCATATGATGTTAGAGACATGGAATCCTCTTGGGGTAGTT
GGTGTCATTACAGCATTTAACTTCCCGTGTGCTGTTCTTGGATGGAATGC
ATGCATTGCACTAGTCTGCGGCAACTGTGTTGTTTGGAAAGGTGCTCCAA
CAACTCCTTTGATCACCATAGCAATAACAAAGCTGGTGTCTGAAGGTTTC
GAGAGGGAACAGTTACCTGGTGCCATTTTTACCTCTTTTTGTGGTGGGGC
TGAGATAAGCCAAGCAATAGCGAAAGAACCCCGTATTTCTCTGGGTTTCT
TTTCCGGGAATTACAAAGGTGGGTTTAATGGCGCAACAAAACATGGGCTC
AAAAATTGGGTAAATGGTTAATTTTGAATTAAGGGGAAAACAAGGTTATT
TATTATAAAGGAAGAAGCCCAAATCCAACCTACCCGG
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