DY271329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271329 vs. ExPASy Swiss-Prot
Match: TCPE_CAEEL (T-complex protein 1 subunit epsilon OS=Caenorhabditis elegans GN=cct-5 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 3.174e-36 Identity = 87/264 (32.95%), Postives = 159/264 (60.23%), Query Frame = 2 Query: 83 PVLVLKD--SLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIA--MPIDAND-LLGLVKSCIGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIK-KYIXVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIATHVLSFLILPLSTKKEKIKQMADLVKEKNW 856 P +V+++ + KR +G + ++I A++AVA+ +RT+LGPR + KML+ G + +TNDG I+ ++DV H AK M+ELS++QD E+GDGTT V+VLAG +L AE+ I++ HP I ++ A + A+ LD+I+ P++ + L+ ++ +G+K ++ A++A+DA +V + D+ + I +E GG+LED+ ++KG++ +K + P +M +++ ++ L P K K K D+ +++ Sbjct: 16 PFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFPVENRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVA-----DIESKDVNFEMIKMEGKVGGRLEDTILVKGIVIDKTMSHP-QMPKELKNAKVAILTCPFEPPKPKTKHKLDITSTEDF 273
BLAST of DY271329 vs. ExPASy Swiss-Prot
Match: THS3_HALVO (Thermosome subunit 3 OS=Halobacterium volcanii GN=cct3 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.413e-36 Identity = 89/252 (35.32%), Postives = 143/252 (56.75%), Query Frame = 2 Query: 74 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDAND--LLGLVKSCIGTKFTSQF-GDLLADLAIDATTTVGVDLGQGLREVDIKKYIXVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIATHVLSFLILPLSTKKEKI 820 M P+ +L + R G +NI+A KAVA+ +RTTLGPR M KML+D+SG +V+TNDG IL ++D+ HPAA+ ++E+S+TQ+EEVGDGTT+ VL GE+L AE+ ++ + HPTVI Y +A A +D + + + +D L + +S + K T D+LA + A V D D++ V G + +++GV+ +K+ V M R ++ ++ L + L +K ++ Sbjct: 5 MQQPLYILAEGTNRTHGRSAQDSNIRAGKAVAEAVRTTLGPRGMDKMLVDSSGEVVITNDGATILEKMDIEHPAAQMLVEVSQTQEEEVGDGTTTAAVLTGELLAHAEDLLDDDLHPTVIVEGYTEAARIAQDAIDDMVLDVTLDDDLLRKVAESSMTGKGTGDVTADVLAKHVVKAVQMVHEDDNGVFHRDDVR----VLTRTGASSSATELVEGVVLDKEPVNE-NMPRSVSDATVAVLDMKLDVRKSEV 251
BLAST of DY271329 vs. ExPASy Swiss-Prot
Match: TCPH_CHICK (T-complex protein 1 subunit eta OS=Gallus gallus GN=CCT7 PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.413e-36 Identity = 92/258 (35.66%), Postives = 146/258 (56.59%), Query Frame = 2 Query: 71 IMHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPI---DANDLLGLVKSCIGT----KFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIXVEKVPGGQLEDSRVLKGVMFNKDVVAPG--KMRRKIATHVLSFLILPLSTKKEK 817 +M +PV++LK+ G +NI A + +A+ +RTTLGPR M K+++D G ++NDG IL+ LDV HPAAK++++++++QD EVGDGTTSV +LA E L + ++ + HP +I RA+ A + AV + IA+ + D ++ L++ C T K SQ + + + +DA + DL Q K I ++KV GG LEDS+++ GV F K G +K + ++ L + L K EK Sbjct: 1 MMPTPVILLKEGTDTSQGIPQLVSNINACQVIAEAVRTTLGPRGMDKLIVDDRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKDIAVSVKKEDKDEQRSLLEKCAATALSSKLISQSKEFFSKMVVDAVMMLD-DLLQ-------LKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYQSPKIALLNVELELKAEK 250
BLAST of DY271329 vs. ExPASy Swiss-Prot
Match: TCPD_CAEEL (T-complex protein 1 subunit delta OS=Caenorhabditis elegans GN=cct-4 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.413e-36 Identity = 93/268 (34.70%), Postives = 153/268 (57.09%), Query Frame = 2 Query: 98 KDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPID-ANDLL--GLVKSCIGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIXVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRR--KIATHVLSFLILPLSTKKEKIKQMADLVKEKNWGIRLKKKKEY 886 KD K ES V ++NI A+KAVAD +RT+LGPR M KM+ +G + +TNDG IL ++ V HP AK ++ELS+ QD E GDGTT+V+V+AG +L A+ ++K HPT I ++ A +A +LD ++ P+D +ND L + + + +K SQ LLA +A++A + + V++K ++K+ G +E+S +++G + ++ + G R K ++ F I P T E + D + LK++++Y Sbjct: 24 KDKDKPES---VRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVDLSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKK--IINSENDSNVNLKMIKIIKKM-GDTVEESELIEGALIDQKTMGRGAPTRIEKAKIGLIQFQISPPKTDMENQVIITDYAQMDR---ALKEERQY 282
BLAST of DY271329 vs. ExPASy Swiss-Prot
Match: TCPH_SCHPO (Probable T-complex protein 1 subunit eta OS=Schizosaccharomyces pombe GN=cct7 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 7.070e-36 Identity = 103/287 (35.89%), Postives = 149/287 (51.92%), Query Frame = 2 Query: 83 PVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDAND---LLGLVKSCIGTKFTSQF----GDLLADLAIDATTTVG-VDLGQGLREVDIKKYIXVEKVPGGQLEDSRVLKGVMFNKDVVAPG--KMRRKIATHVLSFLILPLSTKKEKIKQMADLVKEKNWGIRLKKKKEYPQNPRLANW 913 PV+VLK+ G +NI A AV D IRTTLGP K+++D G +V++NDG I++ LD+ HPAAK++++++R QD EVGDGTTSV+V AGE+L A F+ +I R Y KA + AV + IA+ +D +D L L+ C T S+ + +DA T+ DL + + I ++KVPGG +EDS ++KGV F K G + + + L + L K EK N +R+ K +EY QN A W Sbjct: 9 PVIVLKEGTDDSQGRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDGATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIKEIAIHLDLSDEGKLRDLLTKCASTAMNSKLIRSNSTFFTKMVVDAVLTLDQEDLNENM--------IGIKKVPGGAMEDSLLVKGVAFKKTFSYAGFEQQPKFFKNPKILCLDVELELKAEK----------DNAEVRVDKVQEY-QNIVDAEW 276
BLAST of DY271329 vs. ExPASy Swiss-Prot
Match: TCPD_YEAST (T-complex protein 1 subunit delta OS=Saccharomyces cerevisiae GN=CCT4 PE=1 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 1.575e-35 Identity = 87/258 (33.72%), Postives = 148/258 (57.36%), Query Frame = 2 Query: 113 RESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDANDLLGLVKSC---IGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIXVEKVPGGQLEDSRVLKGVMFNKDVV--APGKMRR-KIATHVLSFLILPLSTKKEK------IKQMADLVKEK 850 +E +V ANI A+++VAD IRT+LGP+ M KM+ + G I+++NDG+ IL+++ + HP A+ ++E+S QD E GDGTTSV++L G +L AE +NK HPT+I ++ A + +V +L + + +D LV++ + +K SQ+ LA LA+D+ + + + VD+ V+KV GG ++D+ ++ GV+ + + A G R+ K ++ F I P E +QM ++KE+ Sbjct: 14 KEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKIS---DENSKNVDLNDIRLVKKV-GGTIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEE 267
BLAST of DY271329 vs. ExPASy Swiss-Prot
Match: TCPH_BOVIN (T-complex protein 1 subunit eta OS=Bos taurus GN=CCT7 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 3.509e-35 Identity = 91/258 (35.27%), Postives = 145/258 (56.20%), Query Frame = 2 Query: 71 IMHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDANDLL---GLVKSC----IGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIXVEKVPGGQLEDSRVLKGVMFNKDVVAPG--KMRRKIATHVLSFLILPLSTKKEK 817 +M +PV++LK+ G +NI A + +A+ +RTTLGPR M K+++D G ++NDG IL+ LDV HPAAK++++++++QD EVGDGTTSV +LA E L + ++ + HP +I RA+ A + AV + IA+ + D + L++ C + +K SQ A + +DA + DL Q K I ++KV GG LE+S+++ GV F K G +K +++ L + L K EK Sbjct: 1 MMPTPVILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLD-DLLQ-------LKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELELKAEK 250
BLAST of DY271329 vs. ExPASy Swiss-Prot
Match: TCPH_HUMAN (T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 4.583e-35 Identity = 92/258 (35.66%), Postives = 144/258 (55.81%), Query Frame = 2 Query: 71 IMHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDANDLL---GLVKSC----IGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIXVEKVPGGQLEDSRVLKGVMFNKDVVAPG--KMRRKIATHVLSFLILPLSTKKEK 817 +M +PV++LK+ G +NI A + +A+ +RTTLGPR M K+++D G ++NDG IL+ LDV HPAAK++++++++QD EVGDGTTSV +LA E L + ++ + HP +I RA+ A + AV + IA+ + D + L++ C + +K SQ A + +DA + DL Q K I ++KV GG LEDS+++ GV F K G +K ++ L + L K EK Sbjct: 1 MMPTPVILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLD-DLLQ-------LKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELELKAEK 250
BLAST of DY271329 vs. ExPASy Swiss-Prot
Match: TCPH_PONAB (T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.985e-35 Identity = 92/258 (35.66%), Postives = 144/258 (55.81%), Query Frame = 2 Query: 71 IMHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDANDLL---GLVKSC----IGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIXVEKVPGGQLEDSRVLKGVMFNKDVVAPG--KMRRKIATHVLSFLILPLSTKKEK 817 +M +PV++LK+ G +NI A + +A+ +RTTLGPR M K+++D G ++NDG IL+ LDV HPAAK++++++++QD EVGDGTTSV +LA E L + ++ + HP +I RA+ A + AV + IA+ + D + L++ C + +K SQ A + +DA + DL Q K I ++KV GG LEDS+++ GV F K G +K ++ L + L K EK Sbjct: 1 MMPTPVILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLD-DLLQ-------LKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKVALLNVELELKAEK 250
BLAST of DY271329 vs. ExPASy Swiss-Prot
Match: TCPH_MOUSE (T-complex protein 1 subunit eta OS=Mus musculus GN=Cct7 PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.021e-34 Identity = 89/258 (34.50%), Postives = 143/258 (55.43%), Query Frame = 2 Query: 71 IMHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDANDLL---GLVKSC----IGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIXVEKVPGGQLEDSRVLKGVMFNKDVVAPG--KMRRKIATHVLSFLILPLSTKKEK 817 +M +PV++LK+ G +NI A + +A+ +RTTLGPR M K+++D G ++NDG IL+ LDV HPAAK++++++++QD EVGDGTTSV +LA E L + ++ + HP +I RA+ A + AV + IA+ + D + +++ C + +K SQ A + +DA L E+ K I ++KV GG LE+S+++ GV F K G +K ++ L + L K EK Sbjct: 1 MMPTPVILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKQDKVEQRKMLEKCAMTALSSKLISQQKVFFAKMVVDAVMM--------LDELLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYKNPKIALLNVELELKAEK 250 The following BLAST results are available for this feature:
BLAST of DY271329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 179
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY271329 ID=DY271329; Name=DY271329; organism=Citrus clementina; type=EST; length=935bpback to top |