DY271334

Overview
NameDY271334
Unique NameDY271334
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length951
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271334 vs. ExPASy Swiss-Prot
Match: CLK4_MOUSE (Dual specificity protein kinase CLK4 OS=Mus musculus GN=Clk4 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.328e-21
Identity = 65/186 (34.95%), Postives = 99/186 (53.23%), Query Frame = 3
Query:  384 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKEL-VAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKTWTKLIPISP----AKTAYRSFPNDLVRELGKTLLESVTFMPDLPLKTHLP*TQKKFLLVSPE*VKVPRIKISHPNRQRRVPNFK 923
            DD++GH +   G+ L  RY I+  +GEG FG+VVEC D+    L VA+KIV+++ +YREAA  EI VL+ L   D     RCVQ+  WFD+  H+CIVFE     L+ +S      + ++  F  D +R++   + +S+ F+    L TH     +  L V  + V     K+    R  +  + K
Sbjct:  141 DDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGLHVAVKIVKNVGRYREAARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFE-----LLGLSTYDFIKENSFLPFQIDHIRQMAYQICQSINFLHHNKL-THTDLKPENILFVKSDYVVKYNSKMKRDERTLKNTDIK 320          
BLAST of DY271334 vs. ExPASy Swiss-Prot
Match: CLK1_MOUSE (Dual specificity protein kinase CLK1 OS=Mus musculus GN=Clk1 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.328e-21
Identity = 66/186 (35.48%), Postives = 102/186 (54.84%), Query Frame = 3
Query:  384 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKTWTKLIPISP----AKTAYRSFPNDLVRELGKTLLESVTFMPDLPLKTHLP*TQKKFLLVSPE*VKVPRIKISHPNRQRRVPNFK 923
            DD++GH +   G+ L+ RY I+  +GEG FG+VVEC D++     VA+KIV+++++Y EAA  EI VL+ L   D   T RCVQ+  WF++R HICIVFE     L+ +S      + ++  F  D +R++   + +SV F+    L TH     +  L V  +  +    K+    R    P+ K
Sbjct:  142 DDEEGHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKVGGRRVAVKIVKNVDRYCEAAQSEIQVLEHLNTTDPHSTFRCVQMLEWFEHRGHICIVFE-----LLGLSTYDFIKENSFLPFRMDHIRKMAYQICKSVNFLHSNKL-THTDLKPENILFVKSDYTEAYNPKMKRDERTIVNPDIK 321          
BLAST of DY271334 vs. ExPASy Swiss-Prot
Match: CLK2_MOUSE (Dual specificity protein kinase CLK2 OS=Mus musculus GN=Clk2 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.734e-21
Identity = 58/160 (36.25%), Postives = 91/160 (56.88%), Query Frame = 3
Query:  384 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-CVQIRNWFDYRNHICIVFEKTWTKLIPISPAKTAYRSFPNDLVRELGKTLLESVTFMPDLPLKTHLP*TQKKFLLVSPE 857
            DD +GH ++ +G+ L  RY I+S +GEGT G+VV+C D+ +    VA+KI++++ KY+EAA +EI+VL+++   D      CVQ+ +WFDY  H+CI FE               Y  +P   VR +   L ++V F+ D  L TH     +  L V+ +
Sbjct:  144 DDAEGHLIYHVGDWLQERYEIVSTLGEGTSGRVVQCVDHRRGGTRVALKIIKNVEKYKEAARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNN-YLPYPIHQVRHMAFQLCQAVKFLHDNKL-THTDLKPENILFVNSD 301          
BLAST of DY271334 vs. ExPASy Swiss-Prot
Match: CLK4_HUMAN (Dual specificity protein kinase CLK4 OS=Homo sapiens GN=CLK4 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.265e-21
Identity = 64/186 (34.41%), Postives = 99/186 (53.23%), Query Frame = 3
Query:  384 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKEL-VAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKTWTKLIPISP----AKTAYRSFPNDLVRELGKTLLESVTFMPDLPLKTHLP*TQKKFLLVSPE*VKVPRIKISHPNRQRRVPNFK 923
            DD++GH +   G+ L  RY I+  +GEG FG+VVEC D+    + VA+KIV+++ +YREAA  EI VL+ L   D     RCVQ+  WFD+  H+CIVFE     L+ +S      + ++  F  D +R++   + +S+ F+    L TH     +  L V  + V     K+    R  +  + K
Sbjct:  141 DDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGMHVAVKIVKNVGRYREAARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFE-----LLGLSTYDFIKENSFLPFQIDHIRQMAYQICQSINFLHHNKL-THTDLKPENILFVKSDYVVKYNSKMKRDERTLKNTDIK 320          
BLAST of DY271334 vs. ExPASy Swiss-Prot
Match: CLK1_HUMAN (Dual specificity protein kinase CLK1 OS=Homo sapiens GN=CLK1 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.265e-21
Identity = 66/186 (35.48%), Postives = 100/186 (53.76%), Query Frame = 3
Query:  384 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKTWTKLIPISP----AKTAYRSFPNDLVRELGKTLLESVTFMPDLPLKTHLP*TQKKFLLVSPE*VKVPRIKISHPNRQRRVPNFK 923
            DD++GH +   G+ L+ RY I+  +GEG FG+VVEC D++     VA+KIV+++++Y EAA  EI VL+ L   D   T RCVQ+  WF++  HICIVFE     L+ +S      +  +  F  D +R++   + +SV F+    L TH     +  L V  +  +    KI    R    P+ K
Sbjct:  143 DDEEGHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFE-----LLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKL-THTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIK 322          
BLAST of DY271334 vs. ExPASy Swiss-Prot
Match: CLKA_DICDI (Probable serine/threonine-protein kinase clkA OS=Dictyostelium discoideum GN=clkA PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.579e-20
Identity = 55/156 (35.26%), Postives = 86/156 (55.13%), Query Frame = 3
Query:  351 IPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG----TRCVQIRNWFDYRNHICIVFEKTWTKLIPISPAKTAYRSFPNDLVRELGKTLLESVTFMPDLPL 806
            I ++    W  DD++ +Y   +GE L  RY++L  +G GTF  VVEC+D      VAIKIVRS  KY E A++EID+L+ L +         + C+++ + F +++HIC+VF++    L      K  YR  P   ++ + K LL ++  M  L L
Sbjct:  563 IEKSNKSMW--DDENDYYKVQVGEYLNNRYKVLCTVGSGTFSTVVECWDTNSSGQVAIKIVRSAKKYTEDALVEIDILRNLEKTGNSNGKYLSHCIRLLDSFLFKDHICLVFKRYGLSLYEFL-KKNRYRPLPLSQIQNISKQLLTAIYSMHKLSL 715          
BLAST of DY271334 vs. ExPASy Swiss-Prot
Match: KNS1_YEAST (Dual specificity protein kinase KNS1 OS=Saccharomyces cerevisiae GN=KNS1 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.616e-19
Identity = 51/142 (35.92%), Postives = 86/142 (60.56%), Query Frame = 3
Query:  387 DKDGHYVFAIGENLTPRYRILSK--MGEGTFGQVVECFDNE-KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKTWTKLIPISPAKTAYRSFPNDLVRELGKTLLESVTFMPDL 800
            DKDGHYV+   +      R + K  +G+GTFG+V++C DN+ +   VA+K++R++++YREAA  E+ +LQ +  +D  G  +C+ +R  FDY+NHIC+V +  + + I           FP   ++ + + L+ SV F+ DL
Sbjct:  294 DKDGHYVYQENDIFGSGGRFVVKDLLGQGTFGKVLKCIDNKYEPNYVAVKVIRAVDRYREAAKTELRILQTILNNDPQGQFQCLLLRECFDYKNHICLVTD-LYGRSIYDFMCSNGIARFPGSHIQAIARQLIRSVCFLHDL 434          
BLAST of DY271334 vs. ExPASy Swiss-Prot
Match: DYRK4_MOUSE (Dual specificity tyrosine-phosphorylation-regulated kinase 4 OS=Mus musculus GN=Dyrk4 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.847e-17
Identity = 42/132 (31.82%), Postives = 78/132 (59.09%), Query Frame = 3
Query:  384 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKTWTKLIPISPAKTAYRSFPNDLVRELGKTLLE 776
            DD+ G Y+  + +++  RY +L  +G+G+FGQV +C D++  ELVA+KI+R+  ++   A++E+ +L+ L R D       V ++++F +RNH+CI FE     L  +     ++  F   +VR    ++L+
Sbjct:  201 DDEHGSYMKVLHDHIAYRYEVLEMIGKGSFGQVAKCLDHKNNELVALKIIRNKKRFHHQALVELKILEALRRKDKDNNHNVVHMKDFFYFRNHLCITFELLGINLYELM-KNNSFHGFNLSIVRRFTFSILK 331          
BLAST of DY271334 vs. ExPASy Swiss-Prot
Match: DYRK4_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 4 OS=Homo sapiens GN=DYRK4 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 9.847e-17
Identity = 42/137 (30.66%), Postives = 81/137 (59.12%), Query Frame = 3
Query:  384 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKTWTKLIPISPAKTAYRSFPNDLVRELGKTLLESVTFM 791
            DD+ G Y+  + +++  RY +L  +G+G+FGQV +C D++  ELVA+KI+R+  ++ + A++E+ +L+ L + D   T   V ++++F +RNH CI FE     L  +      ++ F   +VR    ++L+ +  +
Sbjct:   86 DDEHGFYLKVLHDHIAYRYEVLETIGKGSFGQVAKCLDHKNNELVALKIIRNKKRFHQQALMELKILEALRKKDKDNTYNVVHMKDFFYFRNHFCITFELLGINLYELM-KNNNFQGFSLSIVRRFTLSVLKCLQML 221          
BLAST of DY271334 vs. ExPASy Swiss-Prot
Match: DYR1B_MOUSE (Dual specificity tyrosine-phosphorylation-regulated kinase 1B OS=Mus musculus GN=Dyrk1b PE=1 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 6.383e-16
Identity = 53/161 (32.92%), Postives = 90/161 (55.90%), Query Frame = 3
Query:  384 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG-GTRCVQIRNWFDYRNHICIVFEKTWTKLIPISPAKTAYRSFPNDLVRELGKTLLESVTFM--PDLPLKTHLP*TQKKFLLVSPE 857
            DD +  Y+   GE    RY I S +G+G+FGQVV+ +D++ +ELVAIKI+++   +   A IE+ +L+ + +HD       V ++  F +RNH+C+VFE     L  +    T +R    +L R+L + L  ++ F+  P+L +  H     +  LL +P+
Sbjct:   93 DDDNHDYIVRSGERWLERYEIDSLIGKGSFGQVVKAYDHQTQELVAIKIIKNKKAFLNQAQIELRLLELMNQHDTEMKYYIVHLKRHFMFRNHLCLVFELLSYNLYDLL-RNTHFRGVSLNLTRKLAQQLCTALLFLATPELSI-IHCDLKPENILLCNPK 251          
The following BLAST results are available for this feature:
BLAST of DY271334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
CLK4_MOUSE1.328e-2134.95Dual specificity protein kinase CLK4 OS=Mus muscul... [more]
CLK1_MOUSE1.328e-2135.48Dual specificity protein kinase CLK1 OS=Mus muscul... [more]
CLK2_MOUSE1.734e-2136.25Dual specificity protein kinase CLK2 OS=Mus muscul... [more]
CLK4_HUMAN2.265e-2134.41Dual specificity protein kinase CLK4 OS=Homo sapie... [more]
CLK1_HUMAN2.265e-2135.48Dual specificity protein kinase CLK1 OS=Homo sapie... [more]
CLKA_DICDI5.579e-2035.26Probable serine/threonine-protein kinase clkA OS=D... [more]
KNS1_YEAST3.616e-1935.92Dual specificity protein kinase KNS1 OS=Saccharomy... [more]
DYRK4_MOUSE9.847e-1731.82Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK4_HUMAN9.847e-1730.66Dual specificity tyrosine-phosphorylation-regulate... [more]
DYR1B_MOUSE6.383e-1632.92Dual specificity tyrosine-phosphorylation-regulate... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YK05FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271334 ID=DY271334; Name=DY271334; organism=Citrus clementina; type=EST; length=951bp
GATCAATCCCCTTTTAGGGTTTCCAACACTGAAAATCATTTCTTCAAAAT
TTCCTTAATTTTTTGCTCTCAATTTTTTTTAAAGCATTATGATTCAAATT
GAGCTTAATCCATGGCTCTGCTAGATTTTTTGAATTGAAAATTTAAACAA
TAAAAGAAATGGAAACGCAGAGAATTATAGAATTTCCGCATAAAAACATG
GACAAGCGTCCCAGAAAACGACCCCGTTTAACGTGGGACGTGCCGCCTCC
TCTTCCTCCTCCCAAGGTTCTTCCGGCTCTGTATTGTGTTCAGGAGTTTG
GGAATGGAGGAATGCCCAATTATGCCTGTTCATCCATGTTTTATGGTGCG
ATTCCTCGCACTGGATCACCTCCTTGGAGACCTGATGATAAAGACGGACA
TTATGTTTTTGCCATCGGAGAAAATTTAACTCCTCGCTACAGGATTCTCA
GCAAAATGGGTGAAGGGACATTTGGGCAAGTCGTGGAATGTTTTGACAAT
GAGAAGAAGGAACTTGTGGCAATCAAAATTGTTCGCTCTATAAACAAGTA
TCGTGAAGCAGCCATGATCGAAATTGATGTTCTACAGAGGCTTGCCAGGC
ATGACATTGGTGGCACCCGTTGTGTGCAAATACGGAATTGGTTTGACTAT
CGTAATCATATTTGTATTGTATTTGAAAAAACTTGGACCAAGCTTATACC
AATTTCCCCCGCAAAAACAGCTTATCGTTCATTTCCCAATGATCTGGTTC
GGGAGCTTGGCAAAACACTATTGGAGTCTGTAACATTTATGCCTGATTTA
CCTCTTAAAACACACCTGCCTTGAACCCAAAAAAAATTTCTTCTTGTTTC
CCCCGAATAGGTTAAAGTTCCCCGAATAAAAATTTCTCATCCCAACCGCC
AAAGGAGGGTTCCCAATTTCAAAGAATCCTTCCAAAGTCAATTGCAATTA
A
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