DY271338

Overview
NameDY271338
Unique NameDY271338
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1099
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271338 vs. ExPASy Swiss-Prot
Match: GL34_ORYSJ (Putative germin-like protein 3-4 OS=Oryza sativa subsp. japonica GN=Os03g0693800 PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 8.140e-37
Identity = 86/189 (45.50%), Postives = 115/189 (60.85%), Query Frame = 2
Query:  113 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGN--TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGRASSLD 673
            TD   LQD CVA  D K  V VNG  CK P  A  ++F FS     G    AN  G + T+ +V + PG+NTLG+S  R+D+AP G  PPH+HPRA+E+ +VL G L VG + +  + N   +KV+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +  T+FG+NP I    L +A  +D
Sbjct:   29 TDADPLQDFCVADLDSK--VTVNGHACK-PASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDMGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVD 214          
BLAST of DY271338 vs. ExPASy Swiss-Prot
Match: GL36_ORYSJ (Germin-like protein 3-6 OS=Oryza sativa subsp. japonica GN=Os03g0694000 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.813e-36
Identity = 86/189 (45.50%), Postives = 114/189 (60.32%), Query Frame = 2
Query:  113 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGN--TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGRASSLD 673
            TD   LQD CVA  D K  V VNG  CK P  A  ++F FS     G    AN  G + T+ +V + PG+NTLG+S  R+D+AP G  PPH+HPRA+E+ +VL G L VG + +    N   +KV+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +  T+FG+NP I    L +A  +D
Sbjct:   29 TDADPLQDFCVADLDSK--VTVNGHACK-PASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVD 214          
BLAST of DY271338 vs. ExPASy Swiss-Prot
Match: GL35_ORYSJ (Germin-like protein 3-5 OS=Oryza sativa subsp. japonica GN=Os03g0693900 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 4.040e-36
Identity = 85/189 (44.97%), Postives = 113/189 (59.79%), Query Frame = 2
Query:  113 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGN--TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGRASSLD 673
            TD   LQD CVA  D    V VNG  CK P  A  ++F FS     G    AN  G + T+ +V + PG+NTLG+S  R+D+AP G  PPH+HPRA+E+ +VL G L VG + +    N   +KV+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +  T+FG+NP I    L +A  +D
Sbjct:   27 TDADPLQDFCVA--DLNSEVTVNGHACK-PASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVD 212          
BLAST of DY271338 vs. ExPASy Swiss-Prot
Match: GL33_ORYSJ (Germin-like protein 3-3 OS=Oryza sativa subsp. japonica GN=Os03g0693700 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 5.833e-35
Identity = 85/187 (45.45%), Postives = 111/187 (59.36%), Query Frame = 2
Query:  116 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNT-ANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGRASSLD 673
            DP  LQD CVA  D +  V +NG  CK    A  E  F S L   G+  AN  G + T  +V   PG+NTLG+S  RID+AP G  PPH+HPRA+E+ +VL G L VG + S    N   ++V+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +  T+FG+NP I    L +A  +D
Sbjct:   28 DPDPLQDFCVADLDSE--VTLNGYPCKPTPAAGDEFLFSSRLATGGDVNANPNGSNVTQLDVAGWPGVNTLGVSMNRIDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGSLDTGNRYYSRVVRGGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVD 212          
BLAST of DY271338 vs. ExPASy Swiss-Prot
Match: GL38_ORYSJ (Germin-like protein 3-8 OS=Oryza sativa subsp. japonica GN=Os03g0804700 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.697e-34
Identity = 83/204 (40.69%), Postives = 114/204 (55.88%), Query Frame = 2
Query:  116 DPGHLQDVCVAINDPKDGVFVN-------GKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGRASSLDQRY*KNFKINF 706
            DP  +QD CVA+  P+ G           G  CK      ++DFFF+GL    +T NR G + T AN E  PGLNTLG+S  R+D AP G  P H HPRA+E+  V+ G +  GFV++        +KVL +G+ FV P+G+IHFQ+N+G   A   +A NSQ PG V    T+FG++P I    L ++  +D +  K  K  F
Sbjct:   26 DPEPVQDFCVAVV-PRAGDAAAAACPAYPGFPCKPASTVVSDDFFFAGLAVASDTDNRFGFNVTAANAETFPGLNTLGVSIGRVDLAPGGVNPLHSHPRATELIHVVAGRVLAGFVST---AGEFYSKVLGEGETFVVPRGMIHFQYNVGGVAAQVITAFNSQMPGVVAAGSTLFGSDPEIPDAVLAKSFQVDAKIIKLLKSKF 225          
BLAST of DY271338 vs. ExPASy Swiss-Prot
Match: GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 4.180e-33
Identity = 79/201 (39.30%), Postives = 111/201 (55.22%), Query Frame = 2
Query:  116 DPGHLQDVCVAINDPKDGVFVNGKF----CKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGRASSLDQRY*KNFKINF 706
            DP  +QD CVA+  P+ G   +  +    CK      ++DFFF+GL   G+T N  G      NVE  P LNTLG++  R+D AP G  P H HPRA+E+  V+ G + VGFV++        +KV+ +G+ F  P+GL+HFQ+N G  +A A +  NSQ PG V  A  +FGA+P I    L ++  +D    K  K  F
Sbjct:   36 DPEPIQDFCVAV--PRAGGEASPAYPGFPCKPASAVVSDDFFFAGLAAAGSTDNPFGASLKPGNVEAFPALNTLGVAINRVDLAPGGVNPLHSHPRAAELVHVITGRMLVGFVST---AGKYYSKVVGEGETFAIPRGLMHFQYNPGNASARAMTVFNSQLPGVVPAATALFGADPEIPDAVLAKSFQVDAEIIKLLKSKF 231          
BLAST of DY271338 vs. ExPASy Swiss-Prot
Match: GL12_ORYSJ (Germin-like protein 1-2 OS=Oryza sativa subsp. japonica GN=Os01g0705100 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.030e-31
Identity = 77/181 (42.54%), Postives = 106/181 (58.56%), Query Frame = 2
Query:  116 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGR 658
            D   LQD+CVA  D +    V+G  CK      ++DFF   + +  +T+N  GV+ T A V   PGLNTLG+S  R D AP G  PPH HPRASE+ LVL G + VGF T+    N L +KV+ + ++FV P+GL HFQ N+G  NA+  +  +SQ PG VT    +F   P++  + L +
Sbjct:   30 DSPPLQDICVA--DLRAATAVDGFPCKPTASVVSDDFFCDAIVQAPSTSNPFGVNSTRATVSAFPGLNTLGLSITRTDLAPGGLNPPHSHPRASELVLVLSGEVMVGFTTA---ANRLFSKVVREKELFVVPRGLQHFQLNVGAGNASFVAMFDSQSPGLVTPTFALFATQPAMPMEVLAK 205          
BLAST of DY271338 vs. ExPASy Swiss-Prot
Match: AB19B_PRUPE (Auxin-binding protein ABP19b OS=Prunus persica GN=ABP19B PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 6.674e-31
Identity = 83/195 (42.56%), Postives = 103/195 (52.82%), Query Frame = 2
Query:  113 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGRASSLDQRY*KNFK 697
            T    +QD CVA     DG    G  CK P +    DF +SGLG  GNT N      T A   Q PG+N LGIS  R+D  P G  P H HP ASE+ LV++GT+  GFV SD   NT   K L KGD+ VFPQGL+HFQ N G T A A+ + +S  PG + I D     N  +  + + + + LD    K  K
Sbjct:   15 TSHASVQDFCVADYKAPDGPA--GYSCKKPAIVTVNDFVYSGLGIAGNTTNIFKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVVPFHTHPGASEVLLVVQGTIIAGFVASD---NTPYLKTLKKGDIIVFPQGLLHFQVNGGDTPAIAFPSFSSPSPG-LQIVDFALFKN-DLATELIAQTTLLDAPQIKKLK 202          
BLAST of DY271338 vs. ExPASy Swiss-Prot
Match: GL11_ARATH (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 1.138e-30
Identity = 75/190 (39.47%), Postives = 111/190 (58.42%), Query Frame = 2
Query:  113 TDPGHLQDVCVAINDPK-DGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANR-LGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAA-AYSALNSQFPGEVTIADTVFGANPSINPDFLGRASSLD 673
            +DP  LQD CV+        +F+NGK CKDP  A   DF  S L +PGNT  +   ++ T      +PGLNT+G++  R+D+   G  PPH+HPRASE+ + L+G L VGFV +   +  +  + L+ G+ FVFP+GLIHF +NI   ++A A S L+SQ PG   ++ + F + P    + L  A  ++
Sbjct:   18 SDPDPLQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALSRPGNTKTKPFMINVTVTTTANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVLLVGFVDT---SGRVFTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVSLSSFISKPPFLVEVLKSAYDIN 204          
BLAST of DY271338 vs. ExPASy Swiss-Prot
Match: AB19A_PRUPE (Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 3.312e-30
Identity = 82/190 (43.16%), Postives = 102/190 (53.68%), Query Frame = 2
Query:  128 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGRASSLDQRY*KNFK 697
            +QD CVA     DG    G  CK P      DF +SGLG  GNT N +    T A   Q PG+N LGIS  R+D  P G  P H HP ASE+ LV++GT+  GFV SD   NT   K L KGD+ VFPQGL+HFQ N G T A A+ + +S  PG + I D     N  +  + + + + LD    K  K
Sbjct:   20 VQDFCVADYKAPDGPA--GYSCKKPAKVTINDFVYSGLGIAGNTTNIIKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVIPFHTHPGASEVLLVVQGTIIAGFVASD---NTPYLKTLKKGDIMVFPQGLLHFQVNGGGTPALAFPSFSSPSPG-LQILDFALFKN-DLPTELIAQTTFLDAAQIKKLK 202          
The following BLAST results are available for this feature:
BLAST of DY271338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL34_ORYSJ8.140e-3745.50Putative germin-like protein 3-4 OS=Oryza sativa s... [more]
GL36_ORYSJ1.813e-3645.50Germin-like protein 3-6 OS=Oryza sativa subsp. jap... [more]
GL35_ORYSJ4.040e-3644.97Germin-like protein 3-5 OS=Oryza sativa subsp. jap... [more]
GL33_ORYSJ5.833e-3545.45Germin-like protein 3-3 OS=Oryza sativa subsp. jap... [more]
GL38_ORYSJ1.697e-3440.69Germin-like protein 3-8 OS=Oryza sativa subsp. jap... [more]
GL37_ORYSJ4.180e-3339.30Germin-like protein 3-7 OS=Oryza sativa subsp. jap... [more]
GL12_ORYSJ1.030e-3142.54Germin-like protein 1-2 OS=Oryza sativa subsp. jap... [more]
AB19B_PRUPE6.674e-3142.56Auxin-binding protein ABP19b OS=Prunus persica GN=... [more]
GL11_ARATH1.138e-3039.47Germin-like protein subfamily 1 member 1 OS=Arabid... [more]
AB19A_PRUPE3.312e-3043.16Auxin-binding protein ABP19a OS=Prunus persica GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YK10FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271338 ID=DY271338; Name=DY271338; organism=Citrus clementina; type=EST; length=1099bp
CACTTGATTAAAGTTTGAGATAGGCACATCCTGTGACTTAATCACCATGA
AGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGGCTTTGGCTTCTTCT
TTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGATGTCTGTGTAGCCAT
CAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACC
CCAAGCTTGCGAGAGCAGAAGATTTCTTCTTCTCAGGGCTAGGCAAGCCT
GGAAACACAGCAAATCGACTTGGTGTTGATGAAACAGATGCAAATGTTGA
GCAAATTCCAGGACTCAACACCCTTGGCATATCAGCATTCCGTATTGACT
ATGCACCATATGGCCAAAGGCCACCTCACATTCACCCCCGTGCCAGCGAA
ATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTTTTGTGACATCAGA
CCAACTGAATAACACACTCATCGCAAAAGTTCTAAATAAGGGAGATGTTT
TTGTGTTTCCACAAGGTTTGATTCACTTCCAATTCAACATTGGAAAAACA
AATGCAGCTGCCTATTCTGCTCTAAACAGCCAATTCCCGGGTGAAGTTAC
CATAGCCGACACAGTCTTTGGAGCCAATCCTTCAATCAATCCCGATTTTC
TTGGCAGGGCTTCCAGTTTGGACCAAAGATATTGAAAAAACTTCAAAATA
AATTTCATAATGGCAATCAGGAGAAAGGAATAATGAGCTTTAATAAAAAT
GCCCCCTTCCCAATGGGCTGAATTCTTTTTCTCCAAATTACCAATCCTTA
ATTAAGGAAAAAAAAAAAGTCCCTATTGAAACCTCTCTCCAGGGCGACTG
TGTGCCATGTAATAGACATAATTTGTTTTTTTTTTTTTTTTTCCCACTCA
AACCTCTATCCTAGCCCTCCTTTTTTCCGCTCACACTTACAACATGAAAT
CAGACCCTAGACGATAATAGCCACGCAACTCCGATAACTCGTCCAAAATA
GATCCCTCCTTCTCTCTCAAGCATGCCTTAGGTATACACTTACCAACAAT
TATCTATGTATAATTTTTTCACATCACCCACAGATCACCATATCCTCAG
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