DY271363
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271363 vs. ExPASy Swiss-Prot
Match: EIF3F_HUMAN (Eukaryotic translation initiation factor 3 subunit F OS=Homo sapiens GN=EIF3F PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.922e-21 Identity = 69/264 (26.14%), Postives = 136/264 (51.52%), Query Frame = 2 Query: 35 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTADVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTG---KLTALKGLDARLRE----IRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLGIYLSSL 805 V +HP++L SIVD+Y R + RV+G LLG+ K + +V+N ++VP E + + + D + ++MY + K+++ E ++GWY+TG + E+ + IH+ + PNP+ + +D + + KAY V + + +F + + A ++ E IGV+ +++ T S N V G L + G AR+++ + Y + V+ K+ ++ + L + N +P + + + ND+++ YL++L Sbjct: 92 VRLHPVILASIVDSYER-RNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY--VSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMK----TCFS--PNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANL 343
BLAST of DY271363 vs. ExPASy Swiss-Prot
Match: EI3F1_DROGR (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila grimshawi GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 5.122e-21 Identity = 72/263 (27.38%), Postives = 134/263 (50.95%), Query Frame = 2 Query: 35 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTADVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLGIYLSSL 805 V VHP+VL +VD + R D+ RV+G LLGS KG +V+N + VP +E D + +Y MY + +++N+ E VVGW++TG ++ + IH+ + NPV + +D + + +AY ++ K+ +F +P E+ ++E E G++ L + V + T+ + ++ A + L + L I Y+D VI K+ ++ + L D+ + +P++ + + F+ D+++ I LS L Sbjct: 8 VRVHPVVLFQVVDAFERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNSNESVVGWWATGNEVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGG--KTGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAQRPKTVPPML-DLAQISEASQKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRDLLMVITLSQL 263
BLAST of DY271363 vs. ExPASy Swiss-Prot
Match: EI3F1_DROYA (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila yakuba GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.689e-21 Identity = 74/265 (27.92%), Postives = 135/265 (50.94%), Query Frame = 2 Query: 35 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTADVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTISTLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLGIYLSSL 805 V VHP+VL +VD + R D+ RV+G LLGS KG +V+N + VP +E D + +Y MY + +++N+ E VVGW++TG + + IH+ + NPV + +D + + +AY ++ KS +F +P E+ ++E E G++ L + V + T+ + + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P++ + + F+ +++L I LS L Sbjct: 8 VRVHPVVLFQVVDAFERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGG--KSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEASTKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRNLLLVITLSQL 263
BLAST of DY271363 vs. ExPASy Swiss-Prot
Match: EI3F1_DROSI (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila simulans GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.689e-21 Identity = 74/265 (27.92%), Postives = 135/265 (50.94%), Query Frame = 2 Query: 35 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTADVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTISTLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLGIYLSSL 805 V VHP+VL +VD + R D+ RV+G LLGS KG +V+N + VP +E D + +Y MY + +++N+ E VVGW++TG + + IH+ + NPV + +D + + +AY ++ KS +F +P E+ ++E E G++ L + V + T+ + + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P++ + + F+ +++L I LS L Sbjct: 8 VRVHPVVLFQVVDAFERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGG--KSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEASTKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRNLLLVITLSQL 263
BLAST of DY271363 vs. ExPASy Swiss-Prot
Match: EI3F1_DROSE (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila sechellia GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.689e-21 Identity = 74/265 (27.92%), Postives = 135/265 (50.94%), Query Frame = 2 Query: 35 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTADVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTISTLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLGIYLSSL 805 V VHP+VL +VD + R D+ RV+G LLGS KG +V+N + VP +E D + +Y MY + +++N+ E VVGW++TG + + IH+ + NPV + +D + + +AY ++ KS +F +P E+ ++E E G++ L + V + T+ + + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P++ + + F+ +++L I LS L Sbjct: 8 VRVHPVVLFQVVDAFERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGG--KSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEASTKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRNLLLVITLSQL 263
BLAST of DY271363 vs. ExPASy Swiss-Prot
Match: EI3F1_DROME (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila melanogaster GN=eIF3-S5-1 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.689e-21 Identity = 74/265 (27.92%), Postives = 135/265 (50.94%), Query Frame = 2 Query: 35 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTADVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTISTLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLGIYLSSL 805 V VHP+VL +VD + R D+ RV+G LLGS KG +V+N + VP +E D + +Y MY + +++N+ E VVGW++TG + + IH+ + NPV + +D + + +AY ++ KS +F +P E+ ++E E G++ L + V + T+ + + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P++ + + F+ +++L I LS L Sbjct: 8 VRVHPVVLFQVVDAFERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGG--KSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEASTKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRNLLLVITLSQL 263
BLAST of DY271363 vs. ExPASy Swiss-Prot
Match: EI3F1_DROER (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila erecta GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.689e-21 Identity = 74/265 (27.92%), Postives = 135/265 (50.94%), Query Frame = 2 Query: 35 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTADVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTISTLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLGIYLSSL 805 V VHP+VL +VD + R D+ RV+G LLGS KG +V+N + VP +E D + +Y MY + +++N+ E VVGW++TG + + IH+ + NPV + +D + + +AY ++ KS +F +P E+ ++E E G++ L + V + T+ + + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P++ + + F+ +++L I LS L Sbjct: 8 VRVHPVVLFQVVDAFERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGG--KSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEASTKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRNLLLVITLSQL 263
BLAST of DY271363 vs. ExPASy Swiss-Prot
Match: CSN6_DICDI (COP9 signalosome complex subunit 6 OS=Dictyostelium discoideum GN=csn6 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.689e-21 Identity = 70/264 (26.52%), Postives = 130/264 (49.24%), Query Frame = 2 Query: 32 KVIVHPLVLLSIVDNYNRVAKDTRK----RVVGVLLGSSFKGTADVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQ-PKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTI-STLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLGIYLSSL 805 +V +HPLVL++I D++ R + RV+GV+LG ++ NS+ + + DK LD Y Y +++ ++GWYSTG ++ ++D+ +H+ + +P+ +++D PK +P Y E + +FV P +I E E IGV H+ + + S L + + A+ L+ R++ + YL V +++LP IL + N LP ++ + K++ + ND++L YL+S+ Sbjct: 27 EVDLHPLVLINISDHFTRTKVQSNYQDNCRVIGVILGVQNGRNVEICNSFEMVYATVDKQ---LVLDIEYLRKKY---EQLFPLYDLLGWYSTGSQVSKDDILLHKQISEHNESPLYLMLDTDSPKSKDLPVIIY---ESELHIVNDEPTTIFVKTPYKIQTGEAERIGVNHIAKVTPSGSEGSGLTSHLFTMHNAISMLNIRVKALSDYLQAVKEKRLPYEQNILRKASSLCNQLPTIDTHDFKKSYLQEYNDVLLVTYLASI 281
BLAST of DY271363 vs. ExPASy Swiss-Prot
Match: EI3F1_DROAN (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila ananassae GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.736e-21 Identity = 74/263 (28.14%), Postives = 131/263 (49.81%), Query Frame = 2 Query: 35 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTADVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLGIYLSSL 805 V VHP+VL +VD Y R D+ RV+G LLGS KG +V+N + VP +E D + +Y MY + +++N E VVGW++TG + + IH+ + NPV + +D + + +AY ++ KS +F +P E+ ++E E G++ L + V + T+ + ++ A + L L I Y+D VI K+ ++ + L D+ + +P++ + + F+ +++L I LS L Sbjct: 8 VRVHPVVLFQVVDAYERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNPNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGG--KSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPML-DLAQISEASQKLQQLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRNLLLVITLSQL 263
BLAST of DY271363 vs. ExPASy Swiss-Prot
Match: EIF3F_MOUSE (Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus GN=Eif3f PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.141e-20 Identity = 69/264 (26.14%), Postives = 136/264 (51.52%), Query Frame = 2 Query: 35 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTADVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTG---KLTALKGLDARLRE----IRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLGIYLSSL 805 V +HP++L SIVD+Y R + RV+G LLG+ K + +V+N ++VP E + + + D + ++MY + K+++ E ++GWY+TG + E+ + IH+ + PNP+ + +D + + KAY V + + +F + + A ++ E IGV+ +++ T S N V G L + G AR+++ + Y + V+ K+ ++ + L + N +P + + + ND+++ YL++L Sbjct: 96 VRLHPVILASIVDSYER-RNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSRESPNPIHLTVDTGLQHGRMSIKAY--VSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMK----TCFS--PNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANL 347 The following BLAST results are available for this feature:
BLAST of DY271363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY271363 ID=DY271363; Name=DY271363; organism=Citrus clementina; type=EST; length=959bpback to top |