DY271383

Overview
NameDY271383
Unique NameDY271383
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length971
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY271383 vs. ExPASy Swiss-Prot
Match: WRK59_ARATH (Probable WRKY transcription factor 59 OS=Arabidopsis thaliana GN=WRKY59 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.752e-11
Identity = 30/73 (41.10%), Postives = 45/73 (61.64%), Query Frame = 1 
Query:  214 IFVKADSKDSSLIVKDGHQWRKYGQKVTKDNPSPRAYFRCLMASSGCPVKKKVQRCMEDKSFLVATYEGEHNH 432
            +F    S D  + + DG++WRKYG+K    +P PR Y +C  +S  C VKKK++R   +  +++ TYEG HNH
Sbjct:   95 VFKTKSSIDEKVALDDGYKWRKYGKKPITGSPFPRHYHKC--SSPDCNVKKKIERDTNNPDYILTTYEGRHNH 165
[Close]
BLAST of DY271383 vs. ExPASy Swiss-Prot
Match: WRK69_ARATH (Probable WRKY transcription factor 69 OS=Arabidopsis thaliana GN=WRKY69 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.900e-11
Identity = 33/69 (47.83%), Postives = 41/69 (59.42%), Query Frame = 1 
Query:  259 DGHQWRKYGQKVTKDNPSPRAYFRCLMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSS 465
            D   WRKYGQK  K +P PR Y+RC  +S GCP +K+V+R   D S L+ TY  +HNH    SS    S
Sbjct:   71 DSWAWRKYGQKPIKGSPYPRGYYRC-SSSKGCPARKQVERSRVDPSKLMITYACDHNHPFPSSSANTKS 138
[Close]
BLAST of DY271383 vs. ExPASy Swiss-Prot
Match: WRK65_ARATH (Probable WRKY transcription factor 65 OS=Arabidopsis thaliana GN=WRKY65 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.400e-11
Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 1 
Query:  259 DGHQWRKYGQKVTKDNPSPRAYFRCLMASSGCPVKKKVQRCMEDKSFLVATYEGEHNH 432
            D   WRKYGQK  K +P PR Y+RC  ++ GCP +K+V+R  +D + ++ TY  EHNH
Sbjct:   75 DSWAWRKYGQKPIKGSPYPRGYYRC-SSTKGCPARKQVERSRDDPTMILITYTSEHNH 131
The following BLAST results are available for this feature:
BLAST of DY271383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
WRK59_ARATH3.752e-1141.10Probable WRKY transcription factor 59 OS=Arabidops... [more]
WRK69_ARATH4.900e-1147.83Probable WRKY transcription factor 69 OS=Arabidops... [more]
WRK65_ARATH6.400e-1148.28Probable WRKY transcription factor 65 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YM18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271383 ID=DY271383; Name=DY271383; organism=Citrus clementina; type=EST; length=971bp
CTGCAAGCGAAATTGGAACATGTTCGCAAACAGAATGAGAATCTGAGGCA
TCTGGTGGAAGCAATGAATAATCAATGCAATGATCTCCTGGCACGTATCC
ACGAAGCTAATAGAACATATTCCTCCTCTGATCATCATCACTTCAACAAT
AATATTAATATTGGAGGAGTCACAGCACAAGTTCCTCCTGTTCCAAATGC
CAAGCAATCAAGAATCTTTGTGAAAGCAGATTCTAAGGACAGTAGCCTTA
TCGTGAAAGATGGACATCAATGGAGAAAGTACGGCCAAAAGGTTACTAAA
GATAATCCCTCACCTCGGGCTTATTTCAGATGTTTAATGGCTTCTTCTGG
ATGTCCTGTAAAAAAAAAGGTTCAAAGATGCATGGAGGACAAGTCATTTC
TCGTTGCAACTTATGAAGGAGAACACAACCATGATGTTCAATGTAGCTCA
CTTGGGCAATCCTCCTCTTTAACAAATTATTGCTCACCCAAAAGCTCAAT
TGTACATTGCCCAGATTATCAAACAACTGATTCTTTTGGATCAGATGTCA
CACTTGATCTTACTCTATCTGGGTCCAATCAAGAAACTAGACCCCCTAGA
AACTTGATGCAAGTCTGTGACGATAAAAAGAAGATTGAAGAATATGTGGC
ATCCTTAACTAAAGATCCCAGCTTCACCATAGCTGTAGCCGATGCTGTTG
CAAGTTCCATCAATGGCCCCCCACATAGACCAATGTGAACATTTGGGGAC
GGATACATGGATTCTGTATCTTATTTCCTAAATTAAGAATATGTGGCATC
CTTAACTAAAAATCCCAACCTTCCCCATATTTTTACCCCAATGCGGTTGC
AGTTCCCTTCAAGGCCCCCCATAAACCCATGGGAACTTTTGGGGACCGAT
ACCAGGATTCTGTTACCTTATTTCTTAATTAAGGGAATAAAAAAAACCCA
TTAAGTATTTGAGATAATGGG
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