DY271386

Overview
NameDY271386
Unique NameDY271386
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length979
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNJA4_MOUSE (DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 3.193e-42
Identity = 97/224 (43.30%), Postives = 123/224 (54.91%), Query Frame = 1
Query:  112 TRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP-EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETLNDKERCPQCRGXXXXXXXXXXXXXXXXGMPKWQK 780
            T+YY+ILGV  +AS E++KKAY+K A+K HPDK  D  EKFK ++QAYEVLSDP+KR+IYDQ GE A+KEG  G      P DI                       ++VVH L V+LEDLY G +KKL+L +NVI                    +G GM+V I+ +GP M+QQ+Q  C ECKG GE +N K+RC  C G                GM   QK
Sbjct:    5 TQYYDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFKLISQAYEVLSDPKKRDIYDQGGEQAIKEGGSGSPSFSSPMDI------FDMFFGGGGRMTRERRGKNVVHQLSVTLEDLYNGITKKLALQKNVICEKCEGIGGKKGSVEKCPLCKGRGMQVHIQQIGPGMVQQIQTVCIECKGQGERINPKDRCENCSGAKVTREKKIIEVHVEKGMKDGQK 222          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNJA4_HUMAN (DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 4.170e-42
Identity = 95/224 (42.41%), Postives = 123/224 (54.91%), Query Frame = 1
Query:  112 TRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP-EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETLNDKERCPQCRGXXXXXXXXXXXXXXXXGMPKWQK 780
            T+YY+ILGV  +AS E++KKAY+K A+K HPDK  D  EKFK ++QAYEVLSDP+KR++YDQ GE A+KEG  G      P DI                       ++VVH L V+LEDLY G +KKL+L +NVI                    +G GM++ I+ +GP M+QQ+Q  C ECKG GE +N K+RC  C G                GM   QK
Sbjct:    5 TQYYDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFKLISQAYEVLSDPKKRDVYDQGGEQAIKEGGSGSPSFSSPMDI------FDMFFGGGGRMARERRGKNVVHQLSVTLEDLYNGVTKKLALQKNVICEKCEGVGGKKGSVEKCPLCKGRGMQIHIQQIGPGMVQQIQTVCIECKGQGERINPKDRCESCSGAKVIREKKIIEVHVEKGMKDGQK 222          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNJA1_PONAB (DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 3.530e-41
Identity = 100/263 (38.02%), Postives = 137/263 (52.09%), Query Frame = 1
Query:  112 TRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETLNDKERCPQCRGXXXXXXXXXXXXXXXXGMPKWQKDYLPWWSKRNAGYSPWKTNYFVLSRRDIQSSRKREKNSF 897
            T YY++LGV  NA+ E+LKKAY+K A+K HPDK   + EKFK+++QAYEVLSD +KRE+YD+ GE A+KEG G G G   P DI                       ++VVH L V+LEDLY G ++KL+L +NVI                    +GTGM++ I  +GP M+QQ+Q  C EC+G GE ++ K+RC  C G                GM   QK        +  G  P      VL ++D     +R ++ F
Sbjct:    5 TTYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYDKGGEQAIKEG-GAGGGFGSPMDIFDMFFGGGRMQRERRG-------KNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVCMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDI-IIVLDQKDHAVFTRRGEDLF 258          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNJA1_HUMAN (DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 3.530e-41
Identity = 100/263 (38.02%), Postives = 137/263 (52.09%), Query Frame = 1
Query:  112 TRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETLNDKERCPQCRGXXXXXXXXXXXXXXXXGMPKWQKDYLPWWSKRNAGYSPWKTNYFVLSRRDIQSSRKREKNSF 897
            T YY++LGV  NA+ E+LKKAY+K A+K HPDK   + EKFK+++QAYEVLSD +KRE+YD+ GE A+KEG G G G   P DI                       ++VVH L V+LEDLY G ++KL+L +NVI                    +GTGM++ I  +GP M+QQ+Q  C EC+G GE ++ K+RC  C G                GM   QK        +  G  P      VL ++D     +R ++ F
Sbjct:    5 TTYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYDKGGEQAIKEG-GAGGGFGSPMDIFDMFFGGGGRMQRERRG------KNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVCMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDI-IIVLDQKDHAVFTRRGEDLF 259          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNAJ1_CERAE (DnaJ homolog subfamily A member 1 OS=Cercopithecus aethiops GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 3.530e-41
Identity = 100/263 (38.02%), Postives = 137/263 (52.09%), Query Frame = 1
Query:  112 TRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETLNDKERCPQCRGXXXXXXXXXXXXXXXXGMPKWQKDYLPWWSKRNAGYSPWKTNYFVLSRRDIQSSRKREKNSF 897
            T YY++LGV  NA+ E+LKKAY+K A+K HPDK   + EKFK+++QAYEVLSD +KRE+YD+ GE A+KEG G G G   P DI                       ++VVH L V+LEDLY G ++KL+L +NVI                    +GTGM++ I  +GP M+QQ+Q  C EC+G GE ++ K+RC  C G                GM   QK        +  G  P      VL ++D     +R ++ F
Sbjct:    5 TTYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYDKGGEQAIKEG-GAGGGFGSPMDIFDMFFGGGGRMQRERRG------KNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVCMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDI-IIVLDQKDHAVFTRRGEDLF 259          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNJA1_BOVIN (DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 4.610e-41
Identity = 100/263 (38.02%), Postives = 137/263 (52.09%), Query Frame = 1
Query:  112 TRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETLNDKERCPQCRGXXXXXXXXXXXXXXXXGMPKWQKDYLPWWSKRNAGYSPWKTNYFVLSRRDIQSSRKREKNSF 897
            T YY++LGV  NA+ E+LKKAY+K A+K HPDK   + EKFK+++QAYEVLSD +KRE+YD+ GE A+KEG G G G   P DI                       ++VVH L V+LEDLY G ++KL+L +NVI                    +GTGM++ I  +GP M+QQ+Q  C EC+G GE ++ K+RC  C G                GM   QK        +  G  P      VL ++D     +R ++ F
Sbjct:    5 TTYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYDKGGEQAIKEG-GAGGGFGSPMDIFDMFFGGGGRMQRERRG------KNVVHQLTVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVCMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDI-IIVLDQKDHAVFTRRGEDLF 259          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNJA1_RAT (DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 7.864e-41
Identity = 99/263 (37.64%), Postives = 137/263 (52.09%), Query Frame = 1
Query:  112 TRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETLNDKERCPQCRGXXXXXXXXXXXXXXXXGMPKWQKDYLPWWSKRNAGYSPWKTNYFVLSRRDIQSSRKREKNSF 897
            T YY++LGV  NA+ E+LKKAY+K A+K HPDK   + EKFK+++QAYEVL+D +KRE+YD+ GE A+KEG G G G   P DI                       ++VVH L V+LEDLY G ++KL+L +NVI                    +GTGM++ I  +GP M+QQ+Q  C EC+G GE ++ K+RC  C G                GM   QK        +  G  P      VL ++D     +R ++ F
Sbjct:    5 TTYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLADSKKRELYDKGGEQAIKEG-GAGGGFGSPMDIFDMFFGGGGRMQRERRG------KNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVCMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDI-IIVLDQKDHAVFTRRGEDLF 259          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNJA1_MOUSE (DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 7.864e-41
Identity = 99/263 (37.64%), Postives = 137/263 (52.09%), Query Frame = 1
Query:  112 TRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETLNDKERCPQCRGXXXXXXXXXXXXXXXXGMPKWQKDYLPWWSKRNAGYSPWKTNYFVLSRRDIQSSRKREKNSF 897
            T YY++LGV  NA+ E+LKKAY+K A+K HPDK   + EKFK+++QAYEVL+D +KRE+YD+ GE A+KEG G G G   P DI                       ++VVH L V+LEDLY G ++KL+L +NVI                    +GTGM++ I  +GP M+QQ+Q  C EC+G GE ++ K+RC  C G                GM   QK        +  G  P      VL ++D     +R ++ F
Sbjct:    5 TTYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLADSKKRELYDKGGEQAIKEG-GAGGGFGSPMDIFDMFFGGGGRMQRERRG------KNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVCMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDI-IIVLDQKDHAVFTRRGEDLF 259          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: MAS5_YEAST (Mitochondrial protein import protein MAS5 OS=Saccharomyces cerevisiae GN=YDJ1 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.821e-34
Identity = 75/203 (36.95%), Postives = 105/203 (51.72%), Query Frame = 1
Query:  112 TRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETLNDKERCPQCRG 711
            T++Y+ILGV   A+  ++KKAY+K A+K HPDK    E   KFKE + AYE+LSDPEKR+IYDQ+GED L    G G      F                         +D+ H +  SLE+LY G + KL+L++ ++                     G G+K   R +GP MIQ+ Q  C+ C GTG+ ++ K+RC  C G
Sbjct:    5 TKFYDILGVPVTATDVEIKKAYRKCALKYHPDKNPSEEAAEKFKEASAAYEILSDPEKRDIYDQFGEDGLSGAGGAGGFPGGGFGFGDDIFSQFFGAGGAQRPRGPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGP-MIQRFQTECDVCHGTGDIIDPKDRCKSCNG 206          

HSP 2 Score: 28.1054 bits (61), Expect = 2.821e-34
Identity = 10/28 (35.71%), Postives = 18/28 (64.29%), Query Frame = 2
Query:  767 QNGKKITFPGGAKETPDTVPGRQIILSS 850
            ++G++I F G A + PD +PG  + + S
Sbjct:  225 KDGQRIVFKGEADQAPDVIPGDVVFIVS 252          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: MAS5_SCHPO (Mitochondrial protein import protein mas5 OS=Schizosaccharomyces pombe GN=SPBC1734.11 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.336e-33
Identity = 84/225 (37.33%), Postives = 116/225 (51.56%), Query Frame = 1
Query:  112 TRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP-EKFKELAQAYEVLSDPEKREIYDQYGEDALK-EGMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETLNDKERCPQCRGXXXXXXXXXXXXXXXXGMPKWQK 780
            T+ YE+L V   AS  +LKKAY+K A+K HPDK  +  +KFKE+++AYE+L+D EKR  YD++GE+ L+  G  GG  A D F                         +D+VH +KV+LEDLY G + KL+L + VI                     G+G+K   R +GP MIQ+MQ  C +C G GET+ D++RC +C G                GM   QK
Sbjct:    5 TKLYEVLNVDVTASQAELKKAYRKLALKYHPDKNPNAGDKFKEISRAYEILADEEKRATYDRFGEEGLQGGGADGGMSADDLF-----ASFFGGGMFGGGMPRGPRKGKDLVHTIKVTLEDLYRGKTTKLALQKKVICPKCSGRGGKEGSVKSCASCNGSGVKFITRAMGP-MIQRMQMTCPDCNGAGETIRDEDRCKECDGAKVISQRKILTVHVEKGMHNGQK 223          

HSP 2 Score: 23.0978 bits (48), Expect = 2.336e-33
Identity = 9/25 (36.00%), Postives = 14/25 (56.00%), Query Frame = 2
Query:  770 NGKKITFPGGAKETPDTVPGRQIIL 844
            NG+KI F    ++ P  +PG  I +
Sbjct:  220 NGQKIVFKEEGEQAPGIIPGDVIFV 244          
The following BLAST results are available for this feature:
BLAST of DY271386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJA4_MOUSE3.193e-4243.30DnaJ homolog subfamily A member 4 OS=Mus musculus ... [more]
DNJA4_HUMAN4.170e-4242.41DnaJ homolog subfamily A member 4 OS=Homo sapiens ... [more]
DNJA1_PONAB3.530e-4138.02DnaJ homolog subfamily A member 1 OS=Pongo abelii ... [more]
DNJA1_HUMAN3.530e-4138.02DnaJ homolog subfamily A member 1 OS=Homo sapiens ... [more]
DNAJ1_CERAE3.530e-4138.02DnaJ homolog subfamily A member 1 OS=Cercopithecus... [more]
DNJA1_BOVIN4.610e-4138.02DnaJ homolog subfamily A member 1 OS=Bos taurus GN... [more]
DNJA1_RAT7.864e-4137.64DnaJ homolog subfamily A member 1 OS=Rattus norveg... [more]
DNJA1_MOUSE7.864e-4137.64DnaJ homolog subfamily A member 1 OS=Mus musculus ... [more]
MAS5_YEAST2.821e-3436.95Mitochondrial protein import protein MAS5 OS=Sacch... [more]
MAS5_SCHPO2.336e-3337.33Mitochondrial protein import protein mas5 OS=Schiz... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YM22FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271386 ID=DY271386; Name=DY271386; organism=Citrus clementina; type=EST; length=979bp
GTAGCGTTCTCCTCGAGAAAAATAATTTTCTGGGTCTGTTTCGTTTCTGT
GGATTCCTGTTAAGAAACTCAAAACAAGATGTTTGGAAGAGCACCGAAGA
AGAGCAATAATACGAGGTACTATGAGATCCTGGGGGTGTCCAAGAACGCT
TCCGCTGAGGACTTGAAGAAGGCTTATAAAAAAGCTGCCATCAAGAATCA
TCCCGACAAGGGCGGCGATCCTGAGAAGTTTAAAGAGTTGGCTCAGGCTT
ACGAGGTTCTGAGTGATCCTGAGAAGCGTGAGATATATGATCAGTACGGT
GAGGATGCACTCAAGGAAGGAATGGGTGGTGGCGCTGGCGCCCATGACCC
GTTTGATATCTTTTCGTCTTTCTTTGGCGGCAGCCCATTCGGAGGTGGTA
GCAGCAGGGGACGGAGACAGAGGCGGGGCGAGGACGTGGTTCATCCTTTG
AAGGTGTCCTTGGAGGATCTTTATCTGGGTACCTCGAAGAAGCTCTCACT
TTCGCGGAATGTGATATGCTCGAAGTGCAGTGGCAAAGGGTCAAAATCTG
GCGCTTCGATGAAGTGTTCTGGTTGCCAAGGTACTGGTATGAAGGTCTCG
ATAAGGCACCTAGGACCCTCTATGATTCAGCAGATGCAGCATCCTTGCAA
TGAATGCAAGGGTACCGGTGAGACCCTCAACGATAAAGAACGCTGCCCTC
AGTGCAGGGGAAAGAAGGTTGTTCAGGAGAAAAAGGTGCCTGAGGTCATT
GTTGAGAAGGGCATGCCAAAATGGCAAAAAGATTACCTTCCCTGGTGGAG
CAAAAGAAACGCCGGATACAGTCCCTGGAAGACAAATTATTTTGTCCTCA
GCAGAAGGGACATCCAAAGTTCAAGAAAAAGGGAAAAAAACTCCTTTTAA
AACCAAATTTGGCCCTTAACTGAGGGCCCTCCGCCGTTTCCCATTTGCAC
CGAACTCCCCCGGAAGGGGAAGGCACCCT
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