DY271396

Overview
NameDY271396
Unique NameDY271396
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length970
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271396 vs. ExPASy Swiss-Prot
Match: SAHH_RALPJ (Adenosylhomocysteinase OS=Ralstonia pickettii (strain 12J) GN=ahcY PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 5.893e-65
Identity = 131/243 (53.91%), Postives = 159/243 (65.43%), Query Frame = 1
Query:  139 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSGPKNKFDNLNGCPHSLPKGFEES 867
            ++ V D+  AD+GR EI +AE EMPGLMA R EF  SQP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH              +KGE+LQEYW  T +  +W  GG P++I+DDGGDATLL+H G KAE   +    L  P S +      +   I++ L  D   Y +  + + GV+EETTTGV RLYQM + G L FPAINVNDS  K+KFDNL GC  SL  G + +
Sbjct:   10 DYLVADIKLADWGRKEIAIAETEMPGLMAIRDEFAASQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAATGTPVFAFKGESLQEYWDFTHRIFEWADGGTPNMILDDGGDATLLLHLGAKAE---KDVSVLAHPGSEEET---FLFAAIKEKLAKDATFYSRNLDAIKGVTEETTTGVHRLYQMAQRGELRFPAINVNDSVTKSKFDNLYGCRESLVDGIKRA 246          
BLAST of DY271396 vs. ExPASy Swiss-Prot
Match: SAHH_METEP (Adenosylhomocysteinase OS=Methylobacterium extorquens (strain PA1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 7.697e-65
Identity = 131/244 (53.69%), Postives = 162/244 (66.39%), Query Frame = 1
Query:  127 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHK-MKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSGPKNKFDNLNGCPHSLPKG 855
            A   ++ VKD+  AD+GR EI +AE EMPGLM+ RAE+G SQP KGAKI GSLHMTIQTAVLIETL ALGA++RW SCNI+STQDH               KGETL EYW  T K  DW  GG P++I+DDGGDAT+ +H G++AE     T  L  P   ++ E ++   +++  L   PK +   + + + GVSEETTTGV RLY + + G LLFPAINVNDS  K+KFDNL GC  SL  G
Sbjct:    2 AVANDYIVKDIGLADYGRKEISIAETEMPGLMSTRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTSKLFDWHDGGMPNMILDDGGDATMFVHLGLRAEN--GDTAFLDKP---ESEEEEVFFALLKKKLAEKPKGWFAGLADSIKGVSEETTTGVHRLYNLAKEGKLLFPAINVNDSVTKSKFDNLYGCKESLVDG 240          
BLAST of DY271396 vs. ExPASy Swiss-Prot
Match: SAHH_METC4 (Adenosylhomocysteinase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=ahcY PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 7.697e-65
Identity = 131/244 (53.69%), Postives = 162/244 (66.39%), Query Frame = 1
Query:  127 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHK-MKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSGPKNKFDNLNGCPHSLPKG 855
            A   ++ VKD+  AD+GR EI +AE EMPGLM+ RAE+G SQP KGAKI GSLHMTIQTAVLIETL ALGA++RW SCNI+STQDH               KGETL EYW  T K  DW  GG P++I+DDGGDAT+ +H G++AE     T  L  P   ++ E ++   +++  L   PK +   + + + GVSEETTTGV RLY + + G LLFPAINVNDS  K+KFDNL GC  SL  G
Sbjct:    2 AVANDYIVKDIGLADYGRKEISIAETEMPGLMSTRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTSKLFDWHDGGMPNMILDDGGDATMFVHLGLRAEN--GDTAFLDKP---ESEEEEVFFALLKKKLAEKPKGWFAGLADSIKGVSEETTTGVHRLYNLAKEGKLLFPAINVNDSVTKSKFDNLYGCKESLVDG 240          
BLAST of DY271396 vs. ExPASy Swiss-Prot
Match: SAHH_RHIME (Adenosylhomocysteinase OS=Rhizobium meliloti GN=ahcY PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 1.005e-64
Identity = 133/240 (55.42%), Postives = 159/240 (66.25%), Query Frame = 1
Query:  136 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSGPKNKFDNLNGCPHSLPKG 855
            +++ V D+  ADFGR EI +AE EMPGLMACR EFG S+P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDH               KGETL+EYW  T+K   W  GG  ++I+DDGGDAT+ I  G +AE        L +P S    E +I+   I+  L A P  + + ++ + GV+EETTTGV RLYQ+Q  G L FPAINVNDS  K+KFDN  GC  SL  G
Sbjct:    5 QDYIVADIGLADFGRKEIAIAETEMPGLMACREEFGASKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAASGVPVFAVKGETLEEYWTYTDKIFQWADGGVSNMILDDGGDATMYILLGARAE---AGENILTNPGS---EEEEILFAQIKKRLAATPGWFTRQRDAIKGVTEETTTGVNRLYQLQAKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDG 238          
BLAST of DY271396 vs. ExPASy Swiss-Prot
Match: SAHH_TRIVA (Adenosylhomocysteinase OS=Trichomonas vaginalis PE=3 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.313e-64
Identity = 130/260 (50.00%), Postives = 164/260 (63.08%), Query Frame = 1
Query:  121 KSASGR--EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD---------HXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSGPKNKFDNLNGCPHSLPKGFEES 867
            KS +G   E+++ D++    GR E+ LAE EMPGLM  R  +  S+P KG +I+GSLHMT+QTAVLIETLTALGA+VRW SCNIFSTQD                        WKGETL EYW  T +AL W  G GP  +VDDGGDATLLI +G +    +E  G +P+P   DN E++ VL  ++     D   +H +   + GVSEETTTGV RLYQ+++ G LLFPAINVND+  K+KFDN+ GC HSL  G   +
Sbjct:    4 KSPAGAPFEYRIADINLHVLGRKELTLAEKEMPGLMVLRERYSASKPLKGVRISGSLHMTVQTAVLIETLTALGADVRWASCNIFSTQDTAAAAIVVGPTGTPEKPAGIPVFAWKGETLPEYWENTYRALTWPDGQGPQQVVDDGGDATLLISKGFE----FETAGAVPEPTEADNLEYRCVLATLKQVFNQDKNHWHTVAAGMNGVSEETTTGVHRLYQLEKEGKLLFPAINVNDAVTKSKFDNIYGCRHSLIDGINRA 259          
BLAST of DY271396 vs. ExPASy Swiss-Prot
Match: SAHH_RALEJ (Adenosylhomocysteinase OS=Ralstonia eutropha (strain JMP134) GN=ahcY PE=3 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.313e-64
Identity = 130/244 (53.28%), Postives = 161/244 (65.98%), Query Frame = 1
Query:  136 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSGPKNKFDNLNGCPHSLPKGFEES 867
            +++ V D+S A +GR EI +AE EMPGLMA R EF  +QP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH              +KGE+L+EYW  T +  DW  GG P++I+DDGGDATLL+H G KAE   +    + +P S +      +   I++ L  DP  Y +    + GV+EETTTGV RLYQM + G L FPAINVNDS  K+KFDNL GC  SL  G + +
Sbjct:    9 QDYLVADISLAGWGRKEIAIAETEMPGLMAIRDEFAAAQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAAGGTPVFAFKGESLKEYWDFTHRIFDWVDGGTPNMILDDGGDATLLLHLGAKAE---KDASLIANPGSEEET---FLFAAIKEKLAKDPSWYSRNLAAIRGVTEETTTGVHRLYQMAQKGDLKFPAINVNDSVTKSKFDNLYGCRESLVDGIKRA 246          
BLAST of DY271396 vs. ExPASy Swiss-Prot
Match: SAHH_METPB (Adenosylhomocysteinase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=ahcY PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.715e-64
Identity = 130/244 (53.28%), Postives = 162/244 (66.39%), Query Frame = 1
Query:  127 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHK-MKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSGPKNKFDNLNGCPHSLPKG 855
            A+  ++ V+D+  AD+GR EI +AE EMPGLMA RAE+G SQP KGAKI GSLHMTIQTAVLIETL  LGA++RW SCNI+STQDH               KGETL EYW  T K  DW  GG P++I+DDGGDAT+ +H G++AE     T  L  P   ++ E ++   +++  L   PK +   + + + GVSEETTTGV RLY + + G LLFPAINVNDS  K+KFDNL GC  SL  G
Sbjct:    2 AAANDYIVRDIGLADYGRKEISIAETEMPGLMATRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKHLGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTSKLFDWHDGGMPNMILDDGGDATMFVHLGLRAEN--GDTAFLDKP---ESEEEEVFFALLKKKLAEKPKGWFAGLADSIKGVSEETTTGVHRLYNLAKEGKLLFPAINVNDSVTKSKFDNLYGCKESLVDG 240          
BLAST of DY271396 vs. ExPASy Swiss-Prot
Match: SAHH_SYNPW (Adenosylhomocysteinase OS=Synechococcus sp. (strain WH7803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 2.239e-64
Identity = 128/237 (54.01%), Postives = 161/237 (67.93%), Query Frame = 1
Query:  136 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSGPKNKFDNLNGCPHSL 846
            +++ + D++QA+FGR E+++AE EMPGLMA R ++G  +P KGA+I GSLHMTIQTA LIETL  LGAEVRW SCNIFSTQDH               KGETL+EYW  T + L+WG GG P++I+DDGGDAT L+  G KAE   +    L +P    N E   +   I+  L  DP  Y + K ++ GV+EETTTGV RLY+MQ++G L FPAINVNDS  K+KFDNL GC  SL
Sbjct:   15 QDYVIADINQAEFGRKELDIAETEMPGLMALREKYGTEKPLKGARIAGSLHMTIQTACLIETLVELGAEVRWASCNIFSTQDHAAAAMAARDIPVFAVKGETLEEYWEYTHRILEWGDGGSPNMILDDGGDATGLVMLGSKAE---QDITVLDNPG---NEEETFLFASIKKKLAQDPTFYSRTKAQIQGVTEETTTGVARLYKMQKSGELPFPAINVNDSVTKSKFDNLYGCRESL 245          
BLAST of DY271396 vs. ExPASy Swiss-Prot
Match: SAHH_RALSO (Adenosylhomocysteinase OS=Ralstonia solanacearum GN=ahcY PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 2.239e-64
Identity = 129/243 (53.09%), Postives = 159/243 (65.43%), Query Frame = 1
Query:  139 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSGPKNKFDNLNGCPHSLPKGFEES 867
            ++ V D+  AD+GR EI +AE EMPGLMA R EF  SQP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH              +KGE+L+EYW  T +  +W  GG P++I+DDGGDATLL+H G KAE   +    +  P S +      +   I++ L  D   Y +  + + GV+EETTTGV RLYQM + G L FPAINVNDS  K+KFDNL GC  SL  G + +
Sbjct:   10 DYLVADIKLADWGRKEIAIAETEMPGLMAIRDEFAASQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAASGTPVFAFKGESLKEYWDFTHRIFEWADGGTPNMILDDGGDATLLLHLGAKAE---QDASVIAKPGSEEET---FLFAAIKEKLAKDATFYSRNLDAIKGVTEETTTGVHRLYQMAQRGELRFPAINVNDSVTKSKFDNLYGCRESLVDGIKRA 246          
BLAST of DY271396 vs. ExPASy Swiss-Prot
Match: SAHH_PROM3 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9303) GN=ahcY PE=3 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.925e-64
Identity = 131/243 (53.91%), Postives = 158/243 (65.02%), Query Frame = 1
Query:  139 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSGPKNKFDNLNGCPHSLPKGFEES 867
            ++ V D+  ADFGR E+ +AE EMPGLMA R + G  +P KGA+I GSLHMTIQT VLIETL ALGA+VRW SCNIFSTQDH               KGETL EYW  T + L+WG GG P++I+DDGGDAT L+  G KAE     +  L +P    N E   +   IR  L  D   Y ++K  + GV+EETTTGV RLYQMQ++G L FPAINVNDS  K+KFDNL GC  SL  G + +
Sbjct:   16 QYVVADIDLADFGRKELSIAETEMPGLMALRVKHGSEKPLKGARIAGSLHMTIQTGVLIETLVALGADVRWASCNIFSTQDHAAAAIAASGVPVFATKGETLDEYWAYTHRILEWGDGGTPNMILDDGGDATGLVMLGSKAE---SDSSVLDNPG---NEEETALFASIRTKLAQDSSFYSRIKSNIQGVTEETTTGVARLYQMQKSGELPFPAINVNDSVTKSKFDNLYGCRESLVDGIKRA 252          
The following BLAST results are available for this feature:
BLAST of DY271396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
SAHH_RALPJ5.893e-6553.91Adenosylhomocysteinase OS=Ralstonia pickettii (str... [more]
SAHH_METEP7.697e-6553.69Adenosylhomocysteinase OS=Methylobacterium extorqu... [more]
SAHH_METC47.697e-6553.69Adenosylhomocysteinase OS=Methylobacterium chlorom... [more]
SAHH_RHIME1.005e-6455.42Adenosylhomocysteinase OS=Rhizobium meliloti GN=ah... [more]
SAHH_TRIVA1.313e-6450.00Adenosylhomocysteinase OS=Trichomonas vaginalis PE... [more]
SAHH_RALEJ1.313e-6453.28Adenosylhomocysteinase OS=Ralstonia eutropha (stra... [more]
SAHH_METPB1.715e-6453.28Adenosylhomocysteinase OS=Methylobacterium populi ... [more]
SAHH_SYNPW2.239e-6454.01Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_RALSO2.239e-6453.09Adenosylhomocysteinase OS=Ralstonia solanacearum G... [more]
SAHH_PROM32.925e-6453.91Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YN11FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271396 ID=DY271396; Name=DY271396; organism=Citrus clementina; type=EST; length=970bp
CGCTTGTACAATTATTCACTTTGTTTGGTTAGTTTCCAAAGAGAGAGTAG
ATTGCCCTCTCTTCCTTCTTTCTTTTAGATCTATCAATTCTATTAATCAA
CCATGGCTTTGTCCGTCGAGAAATCCGCTAGCGGTCGTGAATTCAAGGTG
AAGGATCTGTCCCAGGCTGACTTCGGCCGCCTCGAAATCGAGTTGGCCGA
AGTCGAAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCAC
AGCCTTTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCATCCAG
ACGGCCGTCCTCATCGAGACACTCACCGCTCTCGGCGCCGAAGTCCGCTG
GTGCTCCTGCAACATCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCG
CACGTGACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAG
TACTGGTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCC
AGATCTCATCGTCGATGACGGTGGTGACGCCACGTTGTTGATCCACGAGG
GAGTCAAAGCTGAGGAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCG
GCCTCCACCGACAACGCCGAGTTTCAGATTGTTTTGACTATCATTAGAGA
TGGGTTGAAGGCCGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAG
TTGGTGTTTCCGAAGAAACCACGACCGGTGTCAAGAGATTGTACCAGATG
CAAGAAAATGGAACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTGG
CCCCAAGAACAAGTTTGATAACTTGAATGGATGCCCGCACTCCCTCCCCA
AAGGGTTTGAGGAAAGCTACTGGATGTAATGATTGCCCGGAAAGGTTGCC
GGTTGTTTGCGGTTAAGGGGGAAGTTGGCAAGGGGTTGGGCCGGCTGCTT
TGAAACCAGGCCCGGGCCCC
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