DY271410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_AZOSB (Oligoribonuclease OS=Azoarcus sp. (strain BH72) GN=orn PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.954e-28 Identity = 57/139 (41.01%), Postives = 89/139 (64.03%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYP 637 L+W+D+EMTGL+ + DRI+EIA +ITD +L E P + +HQ + LD+M +W +N H SGL ++V S ++E EAE +++ F+++ V T + GNS+ D FL +YMP + F + +DVS++K L W P Sbjct: 8 LIWLDMEMTGLEPDRDRIIEIALVITDSQLNTIAEAPVIAVHQPESVLDAMDDWNKNTHGKSGLIDRVRASTVSEAEAEARMLAFLQEWVPARTSPMCGNSICQDRRFLARYMPAFEAWFHYRNLDVSTLKELAKRWRP 146 HSP 2 Score: 29.6462 bits (65), Expect = 2.954e-28 Identity = 16/35 (45.71%), Postives = 23/35 (65.71%), Query Frame = 3 Query: 639 EIYRKFPSKEQKHRALNDIKESIMELKY*QENIFK 743 E+Y K K+ KH AL DI ESI EL++ ++N + Sbjct: 147 EVY-KGVDKKGKHEALADIHESIGELRHYRDNFLR 180
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_IDILO (Oligoribonuclease OS=Idiomarina loihiensis GN=orn PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.004e-28 Identity = 60/153 (39.22%), Postives = 92/153 (60.13%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEISFKRT 670 K L+WIDLEMTGL+ + + I+E+A I+TD +L EGP + +HQ ++ LD M +W H SGL E+V S ER+A + +EF+++ + + GNS+ D FL K+MP+L + F + +DVS++K L W P SFK++ Sbjct: 7 KQRLIWIDLEMTGLEPDENHIIEVATIVTDAQLNTLAEGPVIAVHQPQKHLDRMDDWNVKTHTGSGLVERVKESQHDERKAAAETIEFLRQYIDAGVSPMCGNSICQDRRFLAKHMPELEAFFHYRNLDVSTLKELAKRWNPEVAN--SFKKS 157 HSP 2 Score: 28.1054 bits (61), Expect = 5.004e-28 Identity = 13/26 (50.00%), Postives = 18/26 (69.23%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENIF 740 K H AL DI+ESI EL++ +E+ F Sbjct: 156 KSGAHEALADIRESIAELQHYREHFF 181
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_COLP3 (Oligoribonuclease OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=orn PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 5.007e-28 Identity = 62/145 (42.76%), Postives = 85/145 (58.62%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEI 655 L+W+DLEMTGL+ D ILEIA IITD +L +GP I QT + LD+M WC HH SGLT++ S ++ A K+ + FV++ V + GNS+ D F+ KYMPD F + +DVS+IK L W P L+ + Sbjct: 8 LIWLDLEMTGLEPVEDVILEIAIIITDSELNILAQGPIFAISQTDDVLDNMNPWCIEHHGKSGLTQRCRDSEVSLAHATKESLAFVQEWVPQGKSPMCGNSIGQDRRFINKYMPDFEDHFHYRNLDVSTIKELAKRWKPEVLESV 152 HSP 2 Score: 30.0314 bits (66), Expect = 5.007e-28 Identity = 16/27 (59.26%), Postives = 18/27 (66.67%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENIFK 743 K H AL+DIKESI ELK +E FK Sbjct: 154 KTGAHLALDDIKESIAELKVYRELFFK 180
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_PSEMY (Oligoribonuclease OS=Pseudomonas mendocina (strain ymp) GN=orn PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 8.486e-28 Identity = 65/152 (42.76%), Postives = 91/152 (59.87%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEISFKRTET 676 L+WIDLEMTGL+ E D I+E+A I+TD +L EGP + IHQ+ E L M EW H SGLT++V S + AE Q + F+++ V + GNS+ D FL KYMP L + F + +DVS++K L W P+ + SF++T T Sbjct: 7 LIWIDLEMTGLEPERDVIIEMATIVTDSELNVLAEGPVIAIHQSDETLAGMDEWNTRTHGQSGLTQRVRESRIDTATAEAQTIAFLEQWVPKGKSPICGNSIGQDRRFLYKYMPALEAYFHYRYLDVSTLKILAGMWAPQ--VKDSFQKTAT 156 HSP 2 Score: 29.6462 bits (65), Expect = 8.486e-28 Identity = 13/27 (48.15%), Postives = 20/27 (74.07%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENIFK 743 K H+AL+DI+ESI ELK+ +++ K Sbjct: 153 KTATHQALDDIRESIAELKHYRQHFLK 179
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_ERWCT (Oligoribonuclease OS=Erwinia carotovora subsp. atroseptica GN=orn PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.486e-28 Identity = 61/139 (43.88%), Postives = 84/139 (60.43%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYP 637 L+WIDLEMTGL + DRI+EIA ++TD L EGP L +HQ+ L M +W H ASGLT++V S ER AE + + F++K V + GNS+ D FL +YMP+L + F + +DVS++K L W P Sbjct: 7 LIWIDLEMTGLNPDHDRIIEIATLVTDANLNVLAEGPVLAVHQSDSQLALMDDWNVRTHGASGLTDRVKVSTADERAAELETLAFLQKWVPAGKSPICGNSIGQDRRFLFRYMPELEAYFHYRYLDVSTLKELARRWKP 145 HSP 2 Score: 30.0314 bits (66), Expect = 8.486e-28 Identity = 12/27 (44.44%), Postives = 20/27 (74.07%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENIFK 743 K+ H+A++DI+ES+ EL Y +EN + Sbjct: 153 KQGTHQAMDDIRESLAELVYYRENFLR 179
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_PSEA6 (Oligoribonuclease OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=orn PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 9.207e-28 Identity = 65/148 (43.92%), Postives = 90/148 (60.81%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEISFK 664 LVWID+EMTGL EVD +LEIA I+TD L EGP L IHQ+ + L++M +WC + H SGLTE+ S + E+ A + + F++K V L GN++ D F+ KYMP+L F + +DVS++K L W P L+ S K Sbjct: 8 LVWIDMEMTGLHPEVDVVLEIATIVTDANLNILAEGPVLAIHQSDDVLNNMNQWCIDTHGKSGLTERSRKSTVDEQTAVAETIRFLEKYVPKGASPLCGNTIGQDRRFMVKYMPELEDYFHYRNIDVSTLKELVKRWKPEVLEGFSKK 155
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_YEAST (Oligoribonuclease, mitochondrial OS=Saccharomyces cerevisiae GN=REX2 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.093e-27 Identity = 72/163 (44.17%), Postives = 100/163 (61.35%), Query Frame = 2 Query: 164 TLENQQN-SQTP-LEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKL--TKSVEGP-----DLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVK-----KNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSI 610 T++N Q+ +QTP L+ + PLVWID EMTGL DRI+EI CIITDG L K+ +G + VIH E ++ M EWC HH SGLT KVL S T + E +++E+++ KNVG +LAGNSV++D +F+ + P + + +VDVSSI Sbjct: 34 TIQNLQSMAQTPELKTKLFKPLVWIDCEMTGLDHVNDRIIEICCIITDGHLAPVKAADGQGDSHYESVIHYGPEVMNKMNEWCIEHHGNSGLTAKVLASEKTLAQVEDELLEYIQRYIPDKNVG----VLAGNSVHMDRLFMVREFPKVIDHLFYRIVDVSSI 192 HSP 2 Score: 31.9574 bits (71), Expect = 1.093e-27 Identity = 18/52 (34.62%), Postives = 27/52 (51.92%), Query Frame = 3 Query: 612 RLYACPGILEIYRKF--------PSKEQKHRALNDIKESIMELKY*QENIFK 743 R+ I+E+ R+ P KE H A +DIKESI +L++ +N K Sbjct: 185 RIVDVSSIMEVARRHNPALQARNPKKEAAHTAYSDIKESIAQLQWYMDNYLK 236
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_VIBF1 (Oligoribonuclease OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=orn PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.105e-27 Identity = 61/142 (42.96%), Postives = 80/142 (56.34%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDL 646 L+W+DLEMTGL E +I+EIA I+TD +L EGP + IHQ +E L M WC N H SGL +V S E A + + F+++ V + GNS+ D FL K+MP L F + VDVS+IK L W P L Sbjct: 8 LIWVDLEMTGLDPETHKIIEIASIVTDAQLNILAEGPVIAIHQPEEELAKMDNWCTNTHTNSGLVARVQESKYDEEAAIAETIAFLEQWVPKGVSPICGNSIGQDRRFLYKHMPRLEEYFHYRYVDVSTIKELARRWKPEVL 149 HSP 2 Score: 32.3426 bits (72), Expect = 1.105e-27 Identity = 15/27 (55.56%), Postives = 21/27 (77.78%), Query Frame = 3 Query: 660 SKEQKHRALNDIKESIMELKY*QENIF 740 +K H AL+DI+ESI ELKY +++IF Sbjct: 153 TKAGTHLALDDIRESIAELKYYRQHIF 179
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_RUTMC (Oligoribonuclease OS=Ruthia magnifica subsp. Calyptogena magnifica GN=orn PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.203e-27 Identity = 65/142 (45.77%), Postives = 89/142 (62.68%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYP 637 K L+WIDLEMTGL E D I+EIA I+T+ +L +GP LVIHQ E L +M +W HH +SGL +V S+L+ ++AE Q +EF+KK V T + GN++ D FL YMP L F + +DVS++K L + W P Sbjct: 4 KTNLIWIDLEMTGLIPEKDVIIEIATIVTNVQLHIIAQGPSLVIHQNDEILSNMDQWNTEHHTSSGLLRRVRESSLSCKQAEAQTLEFLKKYVHTGASPMCGNTICQDRRFLYNYMPTLERFFHYRHIDVSTLKELVIRWKP 145
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_PHOPR (Oligoribonuclease OS=Photobacterium profundum GN=orn PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.203e-27 Identity = 64/148 (43.24%), Postives = 90/148 (60.81%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEISFK 664 L+W+DLEMTGL E+ +I+EIA I+TD +L EGP L IHQ++ L M +WC N H SGL E++ S TE +A +Q + F+++ V + GNS+ D FL K+MP+L F + +DVS+IK L W P L+ S K Sbjct: 8 LIWVDLEMTGLDPEIHQIIEIATIVTDAQLNILAEGPVLAIHQSEAELAKMDDWCTNTHTNSGLVERIRQSKFTEEDAIRQTIAFLEQWVPKGASPICGNSIGQDRRFLYKHMPELEQYFHYRYLDVSTIKELTRRWQPELLEGFSKK 155 The following BLAST results are available for this feature:
BLAST of DY271410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271410 ID=DY271410; Name=DY271410; organism=Citrus clementina; type=EST; length=933bpback to top |