DY271419

Overview
NameDY271419
Unique NameDY271419
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length930
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271419 vs. ExPASy Swiss-Prot
Match: GL121_ORYSJ (Germin-like protein 12-1 OS=Oryza sativa subsp. japonica GN=Os12g0154700 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 4.225e-49
Identity = 112/184 (60.87%), Postives = 131/184 (71.20%), Query Frame = 2
Query:    8 VFVNGKFCKDPKLAKPEDFFF-SGLGKPGNTA-NRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLN--NTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 544
            V VNG  CKD K    +DFF  + L KP +T  ++ G + T  NV ++ GLNTLGIS  RIDYAP GQ PPH HPRA+EIL V EGTL+VGFVTS+Q N  N L +K LNKGD FVFP GLIHFQFN      AVA +AL+SQ PG ITIA+AVFG+NPPI+ D LAKAFQ+D K V  LQ +F
Sbjct:   40 VRVNGFPCKDAKDVNVDDFFLEANLDKPMDTTKSKAGSNVTLINVMKLTGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVFEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSNPPISDDVLAKAFQVDKKAVDWLQAQF 223          
BLAST of DY271419 vs. ExPASy Swiss-Prot
Match: GL81_ORYSJ (Putative germin-like protein 8-1 OS=Oryza sativa subsp. japonica GN=Os08g0188900 PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 5.518e-49
Identity = 109/179 (60.89%), Postives = 131/179 (73.18%), Query Frame = 2
Query:    8 VFVNGKFCKDPKLAKPEDFFFSG-LGKPGNTA-NRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQ 535
            V VNG  CK+P     +DFF +  L KP +TA N++G + T  NV +IPGLNTLGIS  R+DYAP G  PPH HPRA+EI  VLEGTL+VGFVTS+  +N L SKVLNKGD FVFP GLIHFQFN+     A+A SA++SQ PG ITIA+AVF +NPPI+ D LAKAFQ+D K +  LQ
Sbjct:   41 VRVNGFACKNPTNVSADDFFKAAMLDKPRDTAVNKVGSNITLINVMEIPGLNTLGISIVRVDYAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNP-DNKLFSKVLNKGDVFVFPKGLIHFQFNLDPHKPAIATSAISSQNPGIITIANAVFRSNPPISDDILAKAFQVDKKIIDLLQ 218          
BLAST of DY271419 vs. ExPASy Swiss-Prot
Match: GL122_ORYSJ (Germin-like protein 12-2 OS=Oryza sativa subsp. japonica GN=Os12g0154800 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 7.207e-49
Identity = 112/184 (60.87%), Postives = 131/184 (71.20%), Query Frame = 2
Query:    8 VFVNGKFCKDPKLAKPEDFFFSG-LGKPGNTA-NRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLN--NTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 544
            V VNG  CKD K    +DFF +  L KP +T  ++ G + T  NV ++ GLNTLGIS  RIDYAP GQ PPH HPRA+EIL VLEGTL+VGFVTS+Q N  N L +K LNKGD FVFP GLIHFQFN      AVA +AL+SQ PG ITIA+AVFG+N PI+ D LAKAFQ+D K V  LQ +F
Sbjct:   40 VHVNGFPCKDAKDVNVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVLEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSNSPISDDVLAKAFQVDKKAVDWLQAQF 223          
BLAST of DY271419 vs. ExPASy Swiss-Prot
Match: GL85_ORYSJ (Germin-like protein 8-5 OS=Oryza sativa subsp. japonica GN=Os08g0189400 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 9.413e-49
Identity = 108/180 (60.00%), Postives = 127/180 (70.56%), Query Frame = 2
Query:    8 VFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 544
            V VNG  C +P     + FF +         N++G + T  NV QIPGLNTLGIS  RIDYAP GQ PPH HPRA+EIL VLEGTL+VGFVTS+  NNTL SKVLNKGD FVFP GLIHFQFN      AVA +AL+SQ PG ITIA+AVFG+ PPI+ + LAKAFQ++  T+  LQ +F
Sbjct:   40 VRVNGFACLNPMEVNADHFFKAAKLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPQGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDEVLAKAFQVEKGTIDWLQAQF 218          
BLAST of DY271419 vs. ExPASy Swiss-Prot
Match: GL812_ORYSJ (Germin-like protein 8-12 OS=Oryza sativa subsp. japonica GN=Os08g0231400 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 6.101e-48
Identity = 106/181 (58.56%), Postives = 126/181 (69.61%), Query Frame = 2
Query:    8 VFVNGKFCKDPKLAKPEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 544
            V VNG  CK+P     EDFF +     P NT N+LG + T+ NV + PGLNTLGIS  RIDYAP G  PPHIHPRA+E+L VLEGTL+VGFVTS+   N L SKV+ KGD FVFP  +IHFQ N+     AVA SAL+SQ PG ITIA AVFG+ PPI+ D L KAFQ++ K +  LQ +F
Sbjct:   41 VRVNGFACKNPMDVSSEDFFNAAKFDMPRNTFNKLGSNVTNLNVMEFPGLNTLGISLARIDYAPMGVNPPHIHPRATELLTVLEGTLYVGFVTSNP--NKLFSKVVCKGDVFVFPKAMIHFQMNLDHDKPAVAQSALSSQNPGVITIASAVFGSQPPISDDVLTKAFQVEKKLIDWLQSQF 219          
BLAST of DY271419 vs. ExPASy Swiss-Prot
Match: GL123_ORYSJ (Putative germin-like protein 12-3 OS=Oryza sativa subsp. japonica GN=Os12g0154900 PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 7.969e-48
Identity = 110/184 (59.78%), Postives = 130/184 (70.65%), Query Frame = 2
Query:    8 VFVNGKFCKDPKLAKPEDFFFSG-LGKPGN-TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLN--NTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 544
            V VNG  CKD K    +DFF +  L KP + T ++ G + T  NV ++ GLNTLGIS  RIDYAP GQ PPH HPRA+EIL V+EG+L+VGFVTS+Q N  N L +K LNKGD FVFP GLIHFQFN      A A  AL+SQ PG ITIA+AVFG+NPPI+ D LAKAFQ+D K V  LQ +F
Sbjct:   40 VRVNGFPCKDAKDVSVDDFFLAANLDKPMDITKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILSVIEGSLYVGFVTSNQANGENKLFTKTLNKGDVFVFPEGLIHFQFNPSYDKPAAAIVALSSQNPGAITIANAVFGSNPPISDDVLAKAFQVDKKAVDWLQAQF 223          
BLAST of DY271419 vs. ExPASy Swiss-Prot
Match: GL124_ORYSJ (Putative germin-like protein 12-4 OS=Oryza sativa subsp. japonica GN=Os12g0155000 PE=3 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 1.359e-47
Identity = 109/184 (59.24%), Postives = 131/184 (71.20%), Query Frame = 2
Query:    8 VFVNGKFCKDPKLAKPEDFFFSG-LGKPGNTA-NRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLN--NTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 544
            V VNG  CKD K    +DFF +  L KP +T  ++ G + T  NV ++ GLNTL IS  RIDYAP GQ PPH HPRA+EIL VLEG+L+VGFVTS+Q N  N L +K LNKGD FVFP GLIHFQFN      AVA +AL+SQ PG ITIA+AVFG++PPI+ D LAKAFQ+D K +  LQ +F
Sbjct:   40 VRVNGLPCKDAKDVSVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLSISMARIDYAPKGQNPPHTHPRATEILTVLEGSLYVGFVTSNQANRENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSHPPISDDVLAKAFQVDKKAMDWLQAQF 223          
BLAST of DY271419 vs. ExPASy Swiss-Prot
Match: GLP1_MESCR (Germin-like protein OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 5.165e-47
Identity = 94/155 (60.65%), Postives = 109/155 (70.32%), Query Frame = 2
Query:    2 DGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLN--NTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFG 460
            DG+FVNG FCKDP    P+DF F GL  P NT N LG   T      +PGLNTLGIS  R+D+AP+G  PPH HPRA+E+ +VLEGT +VGFVTS+  +  N L +KVLNKGD FVFP GLIHFQ NIG    V  S L+SQ PG ITIA+AVFG
Sbjct:   40 DGLFVNGLFCKDPMEVNPDDFLFRGLNMPANTDNALGFAATLVTAANLPGLNTLGISVARLDFAPHGLNPPHTHPRATEVFVVLEGTFYVGFVTSNLADGGNKLFAKVLNKGDVFVFPQGLIHFQLNIGNYPGVGISGLSSQNPGVITIANAVFG 194          
BLAST of DY271419 vs. ExPASy Swiss-Prot
Match: GL84_ORYSJ (Germin-like protein 8-4 OS=Oryza sativa subsp. japonica GN=GER1 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 8.810e-47
Identity = 102/181 (56.35%), Postives = 126/181 (69.61%), Query Frame = 2
Query:    8 VFVNGKFCKDPKLAKPEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 544
            V VNG  CK+P     +DFF +     P +T N++G + T+ NV   PGLNTLGIS  RIDYAP G  PPHIHPRA+E+L VLEGTL+VGFVTS+   N L SKV++KGD FVFP  +IHFQ N+     AVA S+LNSQ PG ITIA AVFG+ PPI+ D L KAFQ++ K +  L+ +F
Sbjct:   41 VRVNGFPCKNPMEVNSDDFFNAAKFDMPRSTMNKVGSNVTNLNVLNFPGLNTLGISLARIDYAPLGVNPPHIHPRATELLTVLEGTLYVGFVTSNP--NRLFSKVVHKGDTFVFPKAMIHFQMNLDHNKPAVAQSSLNSQNPGVITIASAVFGSKPPISDDVLTKAFQVEKKVIDWLKSQF 219          
BLAST of DY271419 vs. ExPASy Swiss-Prot
Match: GL83_ORYSJ (Germin-like protein 8-3 OS=Oryza sativa subsp. japonica GN=GER2 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 8.810e-47
Identity = 101/181 (55.80%), Postives = 126/181 (69.61%), Query Frame = 2
Query:    8 VFVNGKFCKDPKLAKPEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 544
            V VNG  CK+P     +DFF +     P NT N++G + T+ NV   PGLNTLGIS  RIDYAP G  PPH+HPRA+E+L VLEGTL+VGFVTS+   N L SKV++KGD FVFP  +IHFQ N+     AVA SAL+SQ PG ITIA A+FG+ PPI+ D L KAFQ++ K +  L+ +F
Sbjct:   41 VRVNGFPCKNPMNVTSDDFFNAAKFDMPRNTMNKVGSNVTNLNVINFPGLNTLGISLARIDYAPMGVNPPHVHPRATELLTVLEGTLYVGFVTSNP--NRLFSKVVHKGDVFVFPKAMIHFQMNLDHNKPAVAQSALSSQNPGVITIASAIFGSTPPISDDVLVKAFQVEKKVIDWLKSQF 219          
The following BLAST results are available for this feature:
BLAST of DY271419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL121_ORYSJ4.225e-4960.87Germin-like protein 12-1 OS=Oryza sativa subsp. ja... [more]
GL81_ORYSJ5.518e-4960.89Putative germin-like protein 8-1 OS=Oryza sativa s... [more]
GL122_ORYSJ7.207e-4960.87Germin-like protein 12-2 OS=Oryza sativa subsp. ja... [more]
GL85_ORYSJ9.413e-4960.00Germin-like protein 8-5 OS=Oryza sativa subsp. jap... [more]
GL812_ORYSJ6.101e-4858.56Germin-like protein 8-12 OS=Oryza sativa subsp. ja... [more]
GL123_ORYSJ7.969e-4859.78Putative germin-like protein 12-3 OS=Oryza sativa ... [more]
GL124_ORYSJ1.359e-4759.24Putative germin-like protein 12-4 OS=Oryza sativa ... [more]
GLP1_MESCR5.165e-4760.65Germin-like protein OS=Mesembryanthemum crystallin... [more]
GL84_ORYSJ8.810e-4756.35Germin-like protein 8-4 OS=Oryza sativa subsp. jap... [more]
GL83_ORYSJ8.810e-4755.80Germin-like protein 8-3 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YO19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271419 ID=DY271419; Name=DY271419; organism=Citrus clementina; type=EST; length=930bp
GGATGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCTTGCGA
AACCAGAAGATTTCTTCTTCTCAGGGCTTGGCAAGCCTGGAAACACAGCA
AATCGACTTGGTGTTGATGAAACAGATGCAAATGTTGAGCAAATTCCAGG
ACTCAACACCCTTGGCATATCAGCATTCCGTATTGACTATGCGCCATATG
GCCAAAGGCCACCTCATATTCACCCCCGTGCCAGTGAAATCCTGTTGGTC
CTGGAAGGAACTCTTCACGTCGGTTTTGTGACATCAGACCAACTGAATAA
CACACTCATCTCAAAAGTTCTGAATAAGGGAGATGCTTTTGTGTTTCCAA
TTGGTTTGATTCATTTCCAATTCAACATTGGAAAAACAAATGCAGTTGCC
TATTCTGCTCTCAACAGCCAGTTCCCCGGTGAAATTACCATAGCCGACGC
GGTCTTTGGAGCCAATCCTCCAATAAATCCCGATTTTCTTGCCAAGGCAT
TCCAGTTGGACCCGAAGACAGTGAAAGATCTTCAGCATAAGTTCATTAAT
GGCCATTAGGAGAAGGAATTAATGAGCCTTAATATAAATGGCCCTCTTTA
CTAGTGGCTTTACTGGATTTAGCTCCAGATTATCATATCTTAATTAAATG
TAAAAAAACAACTCTCCTCTAGAAAAAACAAACAAAAAAAAAAAAACCCC
CGCTTTCTGGAACAAAGTTGGGCAATAAAAAAAAGCCTTTGCCTAACAAT
TTTGCTGCCCCACAGTAGGCCCCAACAGCCACAATAAAACATCTCCTCAC
ACCCACCCGGCACACCCTACTAACACATTGCCAAACAGGAACAACACCTG
CTCACCTTCCCCCACCCCAGGCACATAACCCAAACATTCCACAAGTAACT
ACCGACCCCCCACTCCCACCCCACCACCAC
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