DY271426

Overview
NameDY271426
Unique NameDY271426
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length957
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.144e-12
Identity = 38/77 (49.35%), Postives = 47/77 (61.04%), Query Frame = 1
Query:  460 YRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNFPDETPAAAPKSPVKANSPKS 687
            YRG+RQRPWGK+AAEIRDP K G RVWLGTF T             ++RG +A +NFP    +  P  PV+  S +S
Sbjct:  148 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRVNSGEP-DPVRIKSKRS 223          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: EF106_ARATH (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana GN=ERF106 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.494e-12
Identity = 38/91 (41.76%), Postives = 54/91 (59.34%), Query Frame = 1
Query:  373 SAGRKSHGSTAVKHVEQAKKSTERKRKN----QYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNFP 630
            S+  + + S++    +Q+ K  ER  +      YRG+R+RPWGK+AAEIRDP  KG R+WLGTF +             K+RG+KA +NFP
Sbjct:   77 SSSPELNSSSSTYETDQSVKKAERFEEEVDARHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFP 167          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: CRF4_ARATH (Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana GN=CRF4 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.494e-12
Identity = 37/91 (40.66%), Postives = 49/91 (53.85%), Query Frame = 1
Query:  427 KKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNF---PDETPAAAPKSPVKANSPKSL 690
            K S   + + +YRG+RQRPWGKWAAEIRDP +  R+WLGTF T             K+RG  A  NF   P+  P    +   ++N   S+
Sbjct:  106 KPSVSGQNQKKYRGVRQRPWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNFTVQPEPEPVQEQEQEPESNMSVSI 196          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: ERF81_ARATH (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.951e-12
Identity = 43/95 (45.26%), Postives = 52/95 (54.74%), Query Frame = 1
Query:  433 STERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNFPDETPAAAPKSPVKANSPKSLPKLALAPCN 717
            ST   R+  YRG+R+RPWG++AAEIRDP K  RVWLGTF+T              +RG KAK NFP      +P S +  N   S P  A A  N
Sbjct:    3 STTCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRGIKAKTNFP------SPLS-LDLNHLPSAPSAATAAAN 90          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: ERF77_ARATH (Ethylene-responsive transcription factor 10 OS=Arabidopsis thaliana GN=ERF10 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.951e-12
Identity = 32/64 (50.00%), Postives = 42/64 (65.62%), Query Frame = 1
Query:  439 ERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNFP 630
            E+ ++ +YRG+R+RPWG++AAEIRDP K  RVWLG+FNT             + RG KA  NFP
Sbjct:   46 EKSKEVRYRGVRRRPWGRYAAEIRDPVKKKRVWLGSFNTGEEAARAYDSAAIRFRGSKATTNFP 109          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.951e-12
Identity = 38/82 (46.34%), Postives = 49/82 (59.76%), Query Frame = 1
Query:  460 YRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNFPDETPAAAPKSPVKANSPKSLPKLA 702
            YRG+RQRPWGK+AAEIRDP K G RVWLGT+ T             ++RG KA +NFP       P+ PV+  + +  P+ A
Sbjct:   99 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIGLNEPE-PVRLTAKRRSPEPA 179          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.346e-12
Identity = 32/65 (49.23%), Postives = 42/65 (64.62%), Query Frame = 1
Query:  436 TERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNFP 630
            T  +++  +RG+R+RPWG++AAEIRDP K  RVWLGTF+T             + RG KAK NFP
Sbjct:   25 TTMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFP 89          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.346e-12
Identity = 39/85 (45.88%), Postives = 46/85 (54.12%), Query Frame = 1
Query:  457 QYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNFPDETPAAAPKSPVK-ANSPKSLPKLALA 708
            +YRG+R+RPWG++AAEIRDP K  RVWLGTF+T               RG KAK NFP     +  K P   A SP     L  A
Sbjct:   24 RYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNFPTFLELSDQKVPTGFARSPSQSSTLDCA 108          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana GN=ERF11 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.346e-12
Identity = 35/72 (48.61%), Postives = 43/72 (59.72%), Query Frame = 1
Query:  415 VEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNFP 630
            V+ A   T      +YRG+R+RPWG++AAEIRDP K  RVWLGTF+T             + RG KAK NFP
Sbjct:    5 VKTAAVKTNEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFP 76          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.346e-12
Identity = 32/68 (47.06%), Postives = 46/68 (67.65%), Query Frame = 1
Query:  430 KSTERKRKNQYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNFP 630
            K+ + + +  YRG+R+RPWGK+AAEIRDP  KG R+WLGT++T             ++RG+KA +NFP
Sbjct:   78 KTEKEEEERHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFP 145          
The following BLAST results are available for this feature:
BLAST of DY271426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
EF100_ARATH1.144e-1249.35Ethylene-responsive transcription factor 1A OS=Ara... [more]
EF106_ARATH1.494e-1241.76Ethylene-responsive transcription factor ERF106 OS... [more]
CRF4_ARATH1.494e-1240.66Ethylene-responsive transcription factor CRF4 OS=A... [more]
ERF81_ARATH1.951e-1245.26Ethylene-responsive transcription factor 12 OS=Ara... [more]
ERF77_ARATH1.951e-1250.00Ethylene-responsive transcription factor 10 OS=Ara... [more]
ERF2_TOBAC1.951e-1246.34Ethylene-responsive transcription factor 2 OS=Nico... [more]
ERF80_ARATH4.346e-1249.23Ethylene-responsive transcription factor 9 OS=Arab... [more]
ERF78_ARATH4.346e-1245.88Ethylene-responsive transcription factor 4 OS=Arab... [more]
ERF76_ARATH4.346e-1248.61Ethylene-responsive transcription factor 11 OS=Ara... [more]
EF104_ARATH4.346e-1247.06Ethylene-responsive transcription factor ERF104 OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YP06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271426 ID=DY271426; Name=DY271426; organism=Citrus clementina; type=EST; length=957bp
CTGAAGAATCCATAACTCTCTCAAGCCAACAAAAGCAAATTTTACATTTA
ACCCATTCTCTCCTAAAAATCTTTTCTCTTTAGTGCCTGAACAAACCAGA
AGAAACGAGAAACCTTAACCATGTGTGGAGGTGCTATCATTTCGGGCTAC
ATCCCGCCCACCGTGCCGGGCCGGCCAAAGAAGCTGACGGCGGAGTATCT
CTGGCCGGAGCTGAAGAGGTCATCCAACAAGAAGTACTCAAAGCCGATCG
TCGACGATGACTTCGAGGCTGATTTCCAAGGATTCAAGGACGATGAAGAA
GAGTCTGACATTGATGGTGACGTGGACGTTGATGCCGACTTGATGATGGC
TGATATTAAGCCTTTCACTTTCTCAGCTGGTCGCAAGTCTCATGGATCTA
CAGCCGTGAAGCACGTTGAACAAGCTAAAAAATCCACAGAAAGAAAGAGG
AAGAATCAATATAGGGGAATTAGGCAGCGTCCATGGGGAAAATGGGCTGC
TGAGATCCGTGACCCCACAAAAGGGGTTCGTGTCTGGCTAGGAACTTTCA
ATACCGCTGAAGAAGCCGCTAGGGCTTATGATGCCGAGGCACGGAAGATC
CGTGGGAAGAAAGCTAAGGTTAACTTTCCAGATGAAACTCCTGCTGCTGC
TCCAAAGAGCCCAGTGAAGGCCAACTCCCCGAAATCCCTTCCCAAGCTTG
CCCTAGCCCCGTGCAACCCAGTTTGAACCCAAACTTCATTAATTGAACAC
TCCCGACCAGAGTTCCACAACCTGGTGAGTTTTCCGGAGGAGAAACACCC
AGTGAAACAGTTAGGATCTATGGGCCTCTTCCCTGAGGAGGGGAATAAGG
AATCAAAACCCCTTGGGCCACCCCTTAAAACATCCAGGGAACCTCAACCC
AAAAAAGGGAATAACTTCTTTATATTGTCTACTTTTCCCTGGGTCACACT
AGCCCCC
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