DY271426

Overview
NameDY271426
Unique NameDY271426
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length957
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: ERF97_ARATH (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana GN=ERF14 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.676e-12
Identity = 38/80 (47.50%), Postives = 46/80 (57.50%), Query Frame = 1
Query:  451 KNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNFPDETPAAAPKSPVKANSPKS 687
            + +YRG+R+RPWGK+AAEIRD  K G RVWLGTF+T              +RGK A +NFP E       S   ANS  S
Sbjct:   17 QGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPHEYNMGTGSSSTAANSSSS 96          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris GN=ERF4 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.676e-12
Identity = 36/83 (43.37%), Postives = 50/83 (60.24%), Query Frame = 1
Query:  436 TERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNF--PDETPAAAPKSPVKANS 678
            T   ++  YRG+R+RPWG++AAEIRDP K  RVWLGTF+T             + RG KAK NF  P E  + +  S ++++S
Sbjct:   19 TNGVKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFPLPSENQSTSHSSTMESSS 101          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: ERF1_SOLLC (Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.413e-12
Identity = 42/103 (40.78%), Postives = 58/103 (56.31%), Query Frame = 1
Query:  397 STAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNFPDETPAAAPKSPVKANSPKSLPKLA 702
            ST+V     A  + + K ++ YRG+RQRPWGK+AAEIRDP K G RVWLGT+ +             ++RG KA +NFP       P+ PV+    + L + A
Sbjct:   87 STSVSPPTVAPAALQPKGRH-YRGVRQRPWGKFAAEIRDPAKNGARVWLGTYESAEEAALAYGKAAFRMRGTKALLNFPHRIGLNEPE-PVRVTVKRRLSESA 187          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: ERF61_ARATH (Ethylene-responsive transcription factor ERF061 OS=Arabidopsis thaliana GN=ERF061 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.682e-12
Identity = 34/80 (42.50%), Postives = 44/80 (55.00%), Query Frame = 1
Query:  394 GSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNFPD 633
            GS A             K+K  YRG+RQR WGKW AEIR P   +RVWLGT++T             K+RG+ A++NFP+
Sbjct:  114 GSPAAAFAAALAAGRVTKKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNFPN 193          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: CRF5_ARATH (Ethylene-responsive transcription factor CRF5 OS=Arabidopsis thaliana GN=CRF5 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.264e-11
Identity = 34/74 (45.95%), Postives = 44/74 (59.46%), Query Frame = 1
Query:  457 QYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNF----PDETPAAAPKSPV 666
            +YRG+RQRPWGK+AAEIRDP+   R+WLGTF T             +I+G  A+ NF    P  T    P++PV
Sbjct:   98 KYRGVRQRPWGKFAAEIRDPSSRTRLWLGTFATAEEAAIGYDRAAIRIKGHNAQTNFLTPPPSPTTEVLPETPV 171          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: ERF79_ARATH (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana GN=ERF8 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.651e-11
Identity = 34/75 (45.33%), Postives = 44/75 (58.67%), Query Frame = 1
Query:  457 QYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNFPDETPAAAPKSPVKANSP 681
            +YRG+R+RPWG++AAEIRDP K  RVWLGTF+T               RG KAK NF     ++  +S    +SP
Sbjct:   30 RYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKAKTNFGVIVGSSPTQSSTVVDSP 104          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: ERF57_ARATH (Ethylene-responsive transcription factor ERF057 OS=Arabidopsis thaliana GN=ERF057 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.651e-11
Identity = 35/78 (44.87%), Postives = 44/78 (56.41%), Query Frame = 1
Query:  400 TAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNFPD 633
            T++K ++ A K  +      YRG+RQR WGKW AEIR P    R+WLGTF T             KIRG  A++NFPD
Sbjct:   96 TSMKKIDVATKPVKL-----YRGVRQRQWGKWVAEIRLPKNRTRLWLGTFETAQEAALAYDQAAHKIRGDNARLNFPD 168          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: ERF42_ARATH (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF042 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.651e-11
Identity = 35/82 (42.68%), Postives = 42/82 (51.22%), Query Frame = 1
Query:  388 SHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNFPD 633
            SHGS         KK  + K K  YRG R R WGKW +EIR+P K  R+WLGTF T              I+G  A +NFP+
Sbjct:    4 SHGSDT--ECSSKKKKEKTKEKGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALSIKGSSAILNFPE 83          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: ESR1_ARATH (Ethylene-responsive transcription factor ESR1 OS=Arabidopsis thaliana GN=ESR1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.421e-11
Identity = 40/107 (37.38%), Postives = 50/107 (46.73%), Query Frame = 1
Query:  373 SAGRKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNFPDETPAAAPKSPVKANSPKSLP 693
            S  RK         +  A  ST R     YRG+R+RPWG++AAEIRDP    R WLGTF+T               RG KA+ NF   T    P+     ++ KS P
Sbjct:   33 SRNRKLSSKDTTVTIAGAGSSTTR-----YRGVRRRPWGRYAAEIRDPMSKERRWLGTFDTAEQAACAYDSAARAFRGAKARTNFTYPTAVIMPEPRFSFSNKKSSP 134          

HSP 2 Score: 21.1718 bits (43), Expect = 2.421e-11
Identity = 9/17 (52.94%), Postives = 11/17 (64.71%), Query Frame = 2
Query:  671 PTPRNPFPSLP*PRATQ 721
            P+ R P PSLP   +TQ
Sbjct:  134 PSARCPLPSLPLDSSTQ 150          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.817e-11
Identity = 33/83 (39.76%), Postives = 47/83 (56.63%), Query Frame = 1
Query:  382 RKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNFP 630
            R+   + A   V      +   ++ ++RG+R+RPWG++AAEIRDP K  RVWLGTF++              +RG KAK NFP
Sbjct:    2 RRGRAAAAPAPVTGEPNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDAAARALRGPKAKTNFP 84          
The following BLAST results are available for this feature:
BLAST of DY271426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
ERF97_ARATH5.676e-1247.50Ethylene-responsive transcription factor 14 OS=Ara... [more]
ERF4_NICSY5.676e-1243.37Ethylene-responsive transcription factor 4 OS=Nico... [more]
ERF1_SOLLC7.413e-1240.78Ethylene-responsive transcription factor 1 OS=Sola... [more]
ERF61_ARATH9.682e-1242.50Ethylene-responsive transcription factor ERF061 OS... [more]
CRF5_ARATH1.264e-1145.95Ethylene-responsive transcription factor CRF5 OS=A... [more]
ERF79_ARATH1.651e-1145.33Ethylene-responsive transcription factor 8 OS=Arab... [more]
ERF57_ARATH1.651e-1144.87Ethylene-responsive transcription factor ERF057 OS... [more]
ERF42_ARATH1.651e-1142.68Ethylene-responsive transcription factor ERF042 OS... [more]
ESR1_ARATH2.421e-1137.38Ethylene-responsive transcription factor ESR1 OS=A... [more]
ERF3_TOBAC2.817e-1139.76Ethylene-responsive transcription factor 3 OS=Nico... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YP06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271426 ID=DY271426; Name=DY271426; organism=Citrus clementina; type=EST; length=957bp
CTGAAGAATCCATAACTCTCTCAAGCCAACAAAAGCAAATTTTACATTTA
ACCCATTCTCTCCTAAAAATCTTTTCTCTTTAGTGCCTGAACAAACCAGA
AGAAACGAGAAACCTTAACCATGTGTGGAGGTGCTATCATTTCGGGCTAC
ATCCCGCCCACCGTGCCGGGCCGGCCAAAGAAGCTGACGGCGGAGTATCT
CTGGCCGGAGCTGAAGAGGTCATCCAACAAGAAGTACTCAAAGCCGATCG
TCGACGATGACTTCGAGGCTGATTTCCAAGGATTCAAGGACGATGAAGAA
GAGTCTGACATTGATGGTGACGTGGACGTTGATGCCGACTTGATGATGGC
TGATATTAAGCCTTTCACTTTCTCAGCTGGTCGCAAGTCTCATGGATCTA
CAGCCGTGAAGCACGTTGAACAAGCTAAAAAATCCACAGAAAGAAAGAGG
AAGAATCAATATAGGGGAATTAGGCAGCGTCCATGGGGAAAATGGGCTGC
TGAGATCCGTGACCCCACAAAAGGGGTTCGTGTCTGGCTAGGAACTTTCA
ATACCGCTGAAGAAGCCGCTAGGGCTTATGATGCCGAGGCACGGAAGATC
CGTGGGAAGAAAGCTAAGGTTAACTTTCCAGATGAAACTCCTGCTGCTGC
TCCAAAGAGCCCAGTGAAGGCCAACTCCCCGAAATCCCTTCCCAAGCTTG
CCCTAGCCCCGTGCAACCCAGTTTGAACCCAAACTTCATTAATTGAACAC
TCCCGACCAGAGTTCCACAACCTGGTGAGTTTTCCGGAGGAGAAACACCC
AGTGAAACAGTTAGGATCTATGGGCCTCTTCCCTGAGGAGGGGAATAAGG
AATCAAAACCCCTTGGGCCACCCCTTAAAACATCCAGGGAACCTCAACCC
AAAAAAGGGAATAACTTCTTTATATTGTCTACTTTTCCCTGGGTCACACT
AGCCCCC
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