DY271432
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS16_MOUSE (40S ribosomal protein S16 OS=Mus musculus GN=Rps16 PE=2 SV=4) HSP 1 Score: 226.483 bits (576), Expect = 1.119e-58 Identity = 106/142 (74.65%), Postives = 127/142 (89.44%), Query Frame = 3 Query: 72 GPVESVQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 GP++SVQ F R+KTA AV +CKRG GLIK+NG P+E++EP L++K EP+LLLG+ RFAGVD+R+RVKGGGH +QIYAIRQSI++ALVA+YQKYVDE SKKEIKDIL++YDRTLLVADPRRCE KKFGG GARAR+QKSYR Sbjct: 5 GPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS16_HUMAN (40S ribosomal protein S16 OS=Homo sapiens GN=RPS16 PE=1 SV=2) HSP 1 Score: 226.483 bits (576), Expect = 1.119e-58 Identity = 106/142 (74.65%), Postives = 127/142 (89.44%), Query Frame = 3 Query: 72 GPVESVQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 GP++SVQ F R+KTA AV +CKRG GLIK+NG P+E++EP L++K EP+LLLG+ RFAGVD+R+RVKGGGH +QIYAIRQSI++ALVA+YQKYVDE SKKEIKDIL++YDRTLLVADPRRCE KKFGG GARAR+QKSYR Sbjct: 5 GPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS16_BOVIN (40S ribosomal protein S16 OS=Bos taurus GN=RPS16 PE=2 SV=3) HSP 1 Score: 226.483 bits (576), Expect = 1.119e-58 Identity = 106/142 (74.65%), Postives = 127/142 (89.44%), Query Frame = 3 Query: 72 GPVESVQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 GP++SVQ F R+KTA AV +CKRG GLIK+NG P+E++EP L++K EP+LLLG+ RFAGVD+R+RVKGGGH +QIYAIRQSI++ALVA+YQKYVDE SKKEIKDIL++YDRTLLVADPRRCE KKFGG GARAR+QKSYR Sbjct: 5 GPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS16_LUPPO (40S ribosomal protein S16 OS=Lupinus polyphyllus GN=RPS16 PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.254e-58 Identity = 112/117 (95.73%), Postives = 115/117 (98.29%), Query Frame = 3 Query: 147 GLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 GLIKING PIELVEPEILRFKA+EPILLLG+ RFAGVDMRIRVKGGGHTSQIYAIRQSIA+ALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR Sbjct: 29 GLIKINGSPIELVEPEILRFKAFEPILLLGKSRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 145
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS16_ICTPU (40S ribosomal protein S16 OS=Ictalurus punctatus GN=rps16 PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.254e-58 Identity = 105/142 (73.94%), Postives = 126/142 (88.73%), Query Frame = 3 Query: 72 GPVESVQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 GP++SVQ F R+KTA AV +CKRG GLIK+NG P+E +EP L++K EP+LLLG+ RFAGVD+R+RVKGGGH +Q+YAIRQSI++ALVA+YQKYVDE SKKEIKDIL++YDRTLLVADPRRCE KKFGG GARAR+QKSYR Sbjct: 5 GPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLETIEPATLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQVYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS16_DROME (40S ribosomal protein S16 OS=Drosophila melanogaster GN=RpS16 PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.254e-58 Identity = 105/148 (70.95%), Postives = 128/148 (86.49%), Query Frame = 3 Query: 54 MATAKAGPVESVQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 M + PV++VQ F R+KTA AV YCKRG GL+K+NG P+E +EP++L++K EP+LLLG+ +FAGVD+R+RV GGGH +QIYAIRQ+I++ALVAFYQKYVDE SKKEIKDILV+YDRTLLV DPRRCEPKKFGG GARAR+QKSYR Sbjct: 1 MQQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRRCEPKKFGGPGARARYQKSYR 148
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS16_HETFO (40S ribosomal protein S16 OS=Heteropneustes fossilis GN=rps16 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 9.477e-58 Identity = 104/142 (73.24%), Postives = 126/142 (88.73%), Query Frame = 3 Query: 72 GPVESVQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 GP++SVQ F R+KTA AV +CKRG GLIK+NG P+E +EP L++K EP+LLLG+ RFAGVD+R+RVKGGGH +Q+YAIRQ+I++ALVA+YQKYVDE SKKEIKDIL++YDRTLLVADPRRCE KKFGG GARAR+QKSYR Sbjct: 5 GPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLETIEPATLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQVYAIRQAISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS16_SPOFR (40S ribosomal protein S16 OS=Spodoptera frugiperda GN=RpS16 PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.757e-57 Identity = 101/145 (69.66%), Postives = 129/145 (88.97%), Query Frame = 3 Query: 63 AKAGPVESVQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 A+ P+++VQ F R+KTA AV YCKRG G++++NG P++LVEP +L++K EPILLLG+ +F+GVD+R+ VKGGGH +Q+YAIRQ+I++AL+AFYQKYVDE SKKEIKDILV+YDR+LLVADPRRCEPKKFGG GARAR+QKSYR Sbjct: 7 ARREPIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 151
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS16_AEDAE (40S ribosomal protein S16 OS=Aedes aegypti GN=RpS16 PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.757e-57 Identity = 102/148 (68.92%), Postives = 129/148 (87.16%), Query Frame = 3 Query: 54 MATAKAGPVESVQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 M A+ PV +VQ F R+KTA AV YCKRG+GL+++NG P++ +EP++L++K EP+LLLG+ +FAGVD+RIRV GGGH +QIYAIRQ+I++ALV+FYQKYVDE S+KE+KDIL +YDRTLLVADPRRCEPKKFGG GARAR+QKSYR Sbjct: 1 MVKARKEPVNAVQVFGRKKTATAVAYCKRGKGLLRVNGRPLDQIEPKVLQYKLQEPLLLLGKEKFAGVDIRIRVSGGGHVAQIYAIRQAISKALVSFYQKYVDEASRKELKDILTQYDRTLLVADPRRCEPKKFGGPGARARYQKSYR 148
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS16_SCHPO (40S ribosomal protein S16 OS=Schizosaccharomyces pombe GN=rps16a PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.950e-52 Identity = 96/140 (68.57%), Postives = 117/140 (83.57%), Query Frame = 3 Query: 78 VESVQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 ++SVQCF ++ A AV +CK G+GLIK+NG P+ LV+PEILR K YEPIL+ G +FAGVD+R+RV GGGH SQIYAIRQ+I++A+VA+YQK+VDE SK E+K L+ YDRTLLVADPRR EPKKFGG GARAR QKSYR Sbjct: 1 MQSVQCFGKKGNATAVAHCKVGKGLIKVNGAPLSLVQPEILRMKVYEPILVAGADKFAGVDIRVRVSGGGHVSQIYAIRQAISKAIVAYYQKFVDEHSKAELKKALITYDRTLLVADPRRMEPKKFGGHGARARQQKSYR 140 The following BLAST results are available for this feature:
BLAST of DY271432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271432 ID=DY271432; Name=DY271432; organism=Citrus clementina; type=EST; length=716bpback to top |