DY271432
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RLSX_METTH (Fused L13/S9 ribosomal protein OS=Methanobacterium thermoautotrophicum GN=rpl13p/rps9p PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.747e-25 Identity = 64/132 (48.48%), Postives = 83/132 (62.88%), Query Frame = 3 Query: 102 RQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 ++KTA+A + G+G ++IN P+EL PE+ R K EP+ L G VD+ +RV GGG Q A R IA+ LV D S ++K+ V+YDRT+LV DPRR EPKK+GGRGARAR QKSYR Sbjct: 159 KRKTAIARGTIREGKGRVRINKVPVELYTPELARLKIMEPLKLAG-DVINDVDINVRVVGGGIVGQAEAARMVIARGLV-------DWTSDMDLKEKFVQYDRTMLVGDPRRSEPKKYGGRGARARRQKSYR 282
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS9_METKA (30S ribosomal protein S9P OS=Methanopyrus kandleri GN=rps9p PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.200e-25 Identity = 59/137 (43.07%), Postives = 86/137 (62.77%), Query Frame = 3 Query: 87 VQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 VQ ++KTA+A + G G +++N P+ ++EPE+ R K EP+++ G + VD+ ++V+GGG SQ A R +IA+ LV + +++D + YDR +L DPRR EPKKFGGRGARAR QKSYR Sbjct: 5 VQTTGKRKTAIARAVIREGEGRVRVNKRPVNIIEPEMARMKIMEPLIIAGEDIVSQVDIDVKVQGGGWMSQAEAARIAIARGLVEW-------TGDPDLRDAYMAYDRHMLKGDPRRKEPKKFGGRGARARRQKSYR 134
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS9_METST (30S ribosomal protein S9P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps9p PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.019e-24 Identity = 64/132 (48.48%), Postives = 80/132 (60.61%), Query Frame = 3 Query: 102 RQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 ++KTA+A K G G +K+N P+EL EPE+ R K +EP+ L G VD+ +RV GGG Q A R IA+ LV + +KD V+YDRT+LV DPRR E KKFGG GARAR QKSYR Sbjct: 10 KRKTAIARGTVKEGTGRVKVNRKPVELYEPELARLKIFEPLELAG-DIVNSVDINVRVVGGGIMGQAEAARMVIAKGLVEY-------TGDMNLKDRYVQYDRTMLVGDPRRSESKKFGGPGARARKQKSYR 133
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS9_PYRHO (30S ribosomal protein S9P OS=Pyrococcus horikoshii GN=rps9p PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.169e-23 Identity = 59/139 (42.45%), Postives = 86/139 (61.87%), Query Frame = 3 Query: 87 VQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKK--FGGRGARARFQKSYR 497 +Q ++KTA+A + GRG ++ING P+E++EPEI RF EP++L G + VD+ ++V+GGG Q A R +IA+ALV + +K+ ++YDRT+LV DPRR EP K +G RA+ QKSYR Sbjct: 4 IQTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSVDIDVKVQGGGFMGQAEAARIAIARALVEW-------TGDMNLKEKFIKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS9_PYRAB (30S ribosomal protein S9P OS=Pyrococcus abyssi GN=rps9p PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.169e-23 Identity = 60/139 (43.17%), Postives = 86/139 (61.87%), Query Frame = 3 Query: 87 VQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKK--FGGRGARARFQKSYR 497 +Q ++KTA+A + G+G ++ING P+ELVEPEI RF EP++L G + VD+ ++V+GGG Q A R +IA+ALV + +K+ ++YDRT+LV DPRR EP K +G RA+ QKSYR Sbjct: 4 IQTTGKRKTAIARAVIREGKGRVRINGKPVELVEPEIARFTILEPLILAGEEIWNSVDIDVKVQGGGFMGQAEAARIAIARALVEW-------TGDMNLKEKFIKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS9_PYRFU (30S ribosomal protein S9P OS=Pyrococcus furiosus GN=rps9p PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.994e-23 Identity = 58/139 (41.73%), Postives = 86/139 (61.87%), Query Frame = 3 Query: 87 VQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKK--FGGRGARARFQKSYR 497 +Q ++KTA+A + G+G ++ING P+E++EPEI RF EP++L G + VD+ ++V+GGG Q A R +IA+ALV + +K+ ++YDRT+LV DPRR EP K +G RA+ QKSYR Sbjct: 4 IQTTGKRKTAIARAVIREGKGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSVDIDVKVEGGGFMGQAEAARMAIARALVEW-------TGDMSLKEKFMKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS9_THEVO (30S ribosomal protein S9P OS=Thermoplasma volcanium GN=rps9p PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.803e-23 Identity = 62/132 (46.97%), Postives = 84/132 (63.64%), Query Frame = 3 Query: 102 RQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 ++KTAVA K+G+G+I ING P EL E+LR K EP+ L + G+D+ ++VKGGG T Q A R +IA+ +V F Q E++++ +YDRTL+V D R PKK GGRGARA+ QKSYR Sbjct: 9 KRKTAVARAVVKKGKGIITINGTPAELYPVEVLRNKILEPVKL-AEDKAKGIDVTVKVKGGGVTGQADASRTAIARGIVKFLQD-------NELENLFRQYDRTLIVNDVRIKLPKKPGGRGARAKKQKSYR 132
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS9_HALSA (30S ribosomal protein S9P OS=Halobacterium salinarium GN=rps9p PE=3 SV=3) HSP 1 Score: 105.531 bits (262), Expect = 2.880e-22 Identity = 60/132 (45.45%), Postives = 78/132 (59.09%), Query Frame = 3 Query: 102 RQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 ++KTAVA G G ++IN P+ELVEPE+ R K EP + G VD+ I V GGG Q A+R +IA+ LV Y E++D +DR+LLV D R+ E KK+GG GARAR+QKSYR Sbjct: 8 KKKTAVARATVSDGEGRVRINSQPVELVEPEMARLKMLEPFRISGSDLRGDVDIDIDVAGGGFAGQADAVRTAIARGLVEHY-------GDAELRDAFREFDRSLLVNDVRQRESKKWGGPGARARYQKSYR 132
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS9_THEAC (30S ribosomal protein S9P OS=Thermoplasma acidophilum GN=rps9p PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.761e-22 Identity = 60/132 (45.45%), Postives = 88/132 (66.67%), Query Frame = 3 Query: 102 RQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 ++KTAVA K+G+G++ ING P+EL +LR K EP LL+ + +D+ ++V+GGG T Q A R +IA+A+V KY+++ E++++ +YDRTL+V D R PKK GGRGARA+ QKSYR Sbjct: 6 KRKTAVARAVAKKGKGIVTINGYPVELYPVRVLRNKIMEP-LLIAEDKAKDLDIAVKVRGGGVTGQADASRTAIARAIV----KYLNDT---ELENLFRQYDRTLIVNDVRIKLPKKAGGRGARAKKQKSYR 129
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS9_HALMA (30S ribosomal protein S9P OS=Haloarcula marismortui GN=rps9p PE=1 SV=3) HSP 1 Score: 103.99 bits (258), Expect = 8.379e-22 Identity = 56/132 (42.42%), Postives = 81/132 (61.36%), Query Frame = 3 Query: 102 RQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 ++KTAVA + G G ++I+ P+ELV+PE+ + K EP + VD+ + V+GGG Q A R +IA+ LV D + E++D + +DR+LLV D R+ EPKK+GG GARAR+QKSYR Sbjct: 8 KKKTAVARATVREGEGRVRIDSQPVELVDPELAQLKMLEPFRIAEDDLRGEVDVEVSVEGGGVMGQADAARTAIARGLV-------DHTNDAELRDAFMEFDRSLLVNDVRQSEPKKWGGPGARARYQKSYR 132 The following BLAST results are available for this feature:
BLAST of DY271432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY271432 ID=DY271432; Name=DY271432; organism=Citrus clementina; type=EST; length=716bpback to top |