DY271432
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS9_METJA (30S ribosomal protein S9P OS=Methanocaldococcus jannaschii GN=rps9p PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.429e-21 Identity = 59/134 (44.03%), Postives = 81/134 (60.45%), Query Frame = 3 Query: 102 RQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKK--FGGRGARARFQKSYR 497 ++K A+A + G+G I+IN PIEL+EP+ R K EPILL G + +D+ + VKGGG Q+ A R +I +A+V F KE++D + YDRTLLV+D RR EP K +G RA+ QKSYR Sbjct: 10 KRKRAIARAVAREGKGRIRINKIPIELIEPKYKRMKLMEPILLAGEEVISQMDIDVTVKGGGVMGQMDAARTAIGKAIVEF-------TGSKELRDKFLAYDRTLLVSDARRTEPHKPSRSTKGPRAKRQKSYR 136
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS9_PYRKO (30S ribosomal protein S9P OS=Pyrococcus kodakaraensis GN=rps9p PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.438e-21 Identity = 57/139 (41.01%), Postives = 85/139 (61.15%), Query Frame = 3 Query: 87 VQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKK--FGGRGARARFQKSYR 497 +Q ++KTAVA + G+G ++IN P+E++EPEI RF EP++L G + VD+ ++V+GGG Q A R +IA+ALV + + +K+ ++YDRT+LV D RR EP K +G RA+ QKSYR Sbjct: 4 IQTAGKRKTAVARATIREGKGRVRINHKPVEIIEPEIARFTIMEPLILAGEEIVSRVDIDVKVEGGGFMGQAEAARVAIARALVEW-------TNDMNLKEKFMKYDRTMLVGDSRRTEPHKPNRSTKGPRAKRQKSYR 135
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS9_METTP (30S ribosomal protein S9P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps9p PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.438e-21 Identity = 53/132 (40.15%), Postives = 81/132 (61.36%), Query Frame = 3 Query: 102 RQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 ++KTA+A K G+G I+IN P+E++EP + R K EP+++ F+ VD+ + V GGG Q A+R ++A+ ++ + +K+ YDR LLV+D R+ E KKFGG GARA++QKSYR Sbjct: 9 KKKTAIARATFKEGKGRIRINNVPLEIIEPALARMKMMEPVIMAAE-AFSSVDVDVSVMGGGVMGQADAVRTALARGILEW-------TGDAALKEAYAEYDRNLLVSDHRQKEKKKFGGLGARAKYQKSYR 132
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS9_METAC (30S ribosomal protein S9P OS=Methanosarcina acetivorans GN=rps9p PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.184e-21 Identity = 55/140 (39.29%), Postives = 81/140 (57.86%), Query Frame = 3 Query: 78 VESVQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 V+ V + KTA A +G G ++IN P+EL PE+ K EP+L+ G +G+D+ + V+GGG Q A+R ++A+ +V + + I+D YDR LLV+D R+ E K FGG GARA++QKSYR Sbjct: 2 VKVVNSSGKHKTATARATVMKGTGKVRINKIPLELYTPELAMMKISEPLLIAGNDVVSGLDINVDVRGGGIIGQANAVRTAVARGIVEW-------TNDTAIRDNFAAYDRNLLVSDSRQKESKNFGGPGARAKYQKSYR 134
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS9_DESK1 (30S ribosomal protein S9P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rps9p PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.184e-21 Identity = 57/148 (38.51%), Postives = 87/148 (58.78%), Query Frame = 3 Query: 54 MATAKAGPVESVQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 M+ + ++ V ++KT++A K G G + IN P+E ++ E+ + K EP+LL+G VD+R+ V GGG+ SQ A+R +IA+ LV F+ + E+K + YDR +L DPR+ EPKK+G AR R+QKSYR Sbjct: 1 MSQTLSDKIKIVVSSGKRKTSIARAVIKPGIGRVWINNVPVEFIQFELAKMKILEPLLLIG-DLAKTVDIRVNVHGGGYMSQAEAVRIAIARGLVEFF-------NSDEVKSLFKEYDRHMLSGDPRQTEPKKWGRYSARRRWQKSYR 140
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS9_AERPE (30S ribosomal protein S9P OS=Aeropyrum pernix GN=rps9p PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.184e-21 Identity = 56/141 (39.72%), Postives = 88/141 (62.41%), Query Frame = 3 Query: 102 RQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQ---------KYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 ++K A+A + GRG + ING P+E+ E+ R K EP+L+ G + VD+R+RV+GGG Q A+R +IA+ LV F++ + +D+ S ++++ + +DRT+LV DPRR EP+K+ AR R+QKSYR Sbjct: 12 KRKRAIARAVIRPGRGRVWINGVPLEIYPIEMARIKMMEPLLIAGEGVRSLVDIRVRVEGGGVMGQADAVRMAIARGLVEFFRCEESDDELCRMMDKIS-RDLRTAFLEHDRTMLVGDPRRTEPEKYMRYSARRRWQKSYR 151
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS9_METMA (30S ribosomal protein S9P OS=Methanosarcina mazei GN=rps9p PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.159e-21 Identity = 53/140 (37.86%), Postives = 82/140 (58.57%), Query Frame = 3 Query: 78 VESVQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 V+ + + KTA A +G G ++IN P+EL PE+ K EP+L+ G+ +G+D+ + V+GGG Q A+R ++A+ +V + + I+D YDR LLV+D R+ E K FGG GAR+++QKSYR Sbjct: 2 VKVINSSGKHKTATARATVMKGTGKVRINKIPLELYTPELAMMKISEPLLIAGKDVVSGLDINVDVRGGGIVGQANAVRTAVARGIVEW-------TNDTTIRDNFAAYDRNLLVSDSRQKEAKNFGGPGARSKYQKSYR 134
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS9_METM7 (30S ribosomal protein S9P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps9p PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.580e-20 Identity = 57/134 (42.54%), Postives = 83/134 (61.94%), Query Frame = 3 Query: 102 RQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKK--FGGRGARARFQKSYR 497 +++TA+A K G G I+IN P+EL+EP+ ++ K EP++L G + +D+ I VKGGG SQ+ A R ++ +A+V F K E+K+ + YDRTLLV+D RR EP K +G RA+ QKSYR Sbjct: 9 KRRTAIARATAKEGSGKIRINKKPLELMEPKYIKMKLMEPVILAG-EALSNIDVDIDVKGGGIVSQMDATRTALGKAIVEF-------TGKMELKEKFLSYDRTLLVSDARRTEPHKPSKSSKGPRAKRQKSYR 134
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS9_METM5 (30S ribosomal protein S9P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps9p PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.064e-20 Identity = 57/134 (42.54%), Postives = 83/134 (61.94%), Query Frame = 3 Query: 102 RQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKK--FGGRGARARFQKSYR 497 +++TA+A K G G I+IN P+EL+EP+ ++ K EP++L G + +D+ I VKGGG SQ+ A R ++ +A+V F K E+K+ + YDRTLLV+D RR EP K +G RA+ QKSYR Sbjct: 9 KRRTAIARATAKEGSGKIRINKKPLELMEPKYIKMKLMEPVILAG-EALSDIDVDIDVKGGGIVSQMDATRTALGKAIVEF-------TGKMELKEKFLSYDRTLLVSDARRTEPHKPSKSSKGPRAKRQKSYR 134
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS9_METVS (30S ribosomal protein S9P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps9p PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.520e-20 Identity = 55/134 (41.04%), Postives = 82/134 (61.19%), Query Frame = 3 Query: 102 RQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKK--FGGRGARARFQKSYR 497 +++TA+A G G I+IN P+EL+EP+ ++ K EP++L G +D+ + VKGGG SQ+ A R ++ +A++ F K E+K++ + YDRTLLV+D RR EP K +G RAR QKSYR Sbjct: 9 KRRTAIARATATEGSGKIRINKKPLELMEPKYIKMKLMEPVILAG-EILGSIDVDVDVKGGGTVSQMDAARTALGKAIIEF-------TGKMELKEMFLSYDRTLLVSDARRTEPHKPSKSSKGPRARRQKSYR 134 The following BLAST results are available for this feature:
BLAST of DY271432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY271432 ID=DY271432; Name=DY271432; organism=Citrus clementina; type=EST; length=716bpback to top |