DY271436

Overview
NameDY271436
Unique NameDY271436
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1013
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY271436 vs. ExPASy Swiss-Prot
Match: RS29_SCHPO (40S ribosomal protein S29 OS=Schizosaccharomyces pombe GN=rps29 PE=2 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 1.365e-11
Identity = 33/56 (58.93%), Postives = 36/56 (64.29%), Query Frame = 3 
Query:   69 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 236
            M H NVW SHP+ YG GSR C   G    +IRKYGL   RQ FR  A +IGFVKYR
Sbjct:    1 MAHENVWFSHPRKYGKGSRQCAHTGRRLGLIRKYGLNISRQSFREYANDIGFVKYR 56
The following BLAST results are available for this feature:
BLAST of DY271436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RS29_SCHPO1.365e-1158.9340S ribosomal protein S29 OS=Schizosaccharomyces p... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YP18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271436 ID=DY271436; Name=DY271436; organism=Citrus clementina; type=EST; length=1013bp
GTAGGGTTTTATTTTAGCTTAAGCCAACCGGCTCTTCCCTTTGTTAAAGA
AGAAGAAAACAATCGATCATGGGTCACTCCAACGTTTGGAACTCTCACCC
CAAGACTTATGGGCCCGGTTCTCGCGCTTGCCGGGTTTGTGGGAACCCTC
ATGCAATAATCAGGAAGTATGGGCTCATGTGCTGCAGACAATGCTTCCGT
AGCAATGCCAAGGAGATTGGTTTTGTTAAGTACCGCTAAATGATTAACAT
GTTGTCCACATCGGAAGGGGGGTTACCAGTACCATGCTGATTTTGTTTCA
TCCTGTGATGCCTGTAGCGAATTTCTGTTTCTCAAGGATTGTTAACCGAT
GTTCTGTCTTACCTTGATTCCACGTTTGACAAAGCAATTGTTGGACTAAG
AACATCCTTGACTCTTCTTATTAAGGTTTAAATCATTCCTCCCGAAAACC
AACTCGAACAAAAACCCACCCTTCCTGCACCCACCGGGCCTCCCCCACAA
GCTTTGCCACACTCATTTGCTGGAAACAGACAGGTCACGACCCTCCCCAC
CCACCCCCGCATTTGCCCCCCCCCCCGCTCACCGCCCCCACTCTGCCCCC
CATCCCTGGCCACTACCCGATCCCCCGTCCTCCCCGGACCCGCCGCCCCC
CACCCCCCCTGAACAACCAACCCACACCCTACTTGACCTCTCCACTTGTA
GATCCCCTCCCCGCGCTCATCACACACCCCCCTTCACTTCCCACACCGAC
CCACCCCTCCCCACACCTCCAAAAAAGGACCACACTCCACACCAACATTA
CTCCTCATTCCGCCTCTACAACCCTCCTCTTCGACCATCCTCGGCTCCCC
CCTCCCCACTAACCACTAATAGCCCACACCCATCCCCCTACTACCTACTT
CCTAATCCCAACACCGATGCCCGCCGTCAAACGCAACGTCCTCCTTCTCG
CCCCCCATCCCTTGCCGCCCCGACATACCACCTCATCCCCCCCCCCTATT
TCTTCCTTCTCCT
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