DY271440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RHO4_SCHPO (GTP-binding protein rho4 OS=Schizosaccharomyces pombe GN=rho4 PE=1 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 3.919e-39 Identity = 82/187 (43.85%), Postives = 114/187 (60.96%), Query Frame = 2 Query: 179 KKKKMSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV--NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQF--FIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKFALQ 727 KK + K V VGDG GKTCLLI ++S TFP YVPTVF+N+ ++ N + L LWDTAGQE+Y+RLRPLSY ++V +L FS+ AS NV++KW PE++H+ P PI+LVG K DLR D+ + G P++ Q + + + AP Y+ECS+K V VF A+ ++ Sbjct: 5 KKSGSKSETSKKLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQEEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLRKDRNATEVLRTQGLTPVTYQQAQSVALSMNAP-YVECSAKENTGVNEVFQLAVGLTIK 190
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: CRL1_CANAL (GTP-binding RHO-like protein OS=Candida albicans GN=CRL1 PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.919e-39 Identity = 84/169 (49.70%), Postives = 111/169 (65.68%), Query Frame = 2 Query: 209 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV-NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAI 712 +K V VGDG GKTCLL++YT N FP+ YVPTVF+N+ V NG TV L LWDTAGQE+Y+RLRPLSY D+ ++ F++ ++ S ENV W PE+ HY PG+PIILVGTK DL D ++H ++ ++ K IGA I S+KT NV+ VF+ A+ Sbjct: 76 MKIVVVGDGGCGKTCLLLAYTQNKFPSIYVPTVFENYVTAVQSPNGKTVELALWDTAGQEEYDRLRPLSYPDVDILLVCFAVDNEVSLENVKDMWFPEVNHYCPGIPIILVGTKSDLLSD----MNHDASIRVA--------KEIGAIGLIFTSAKTMFNVRTVFNFAL 232
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RHOF_BOVIN (Rho-related GTP-binding protein RhoF OS=Bos taurus GN=RHOF PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.945e-38 Identity = 79/179 (44.13%), Postives = 115/179 (64.25%), Query Frame = 2 Query: 194 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGA--VPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKFAL 724 S + +K V VGDG GKT LL+ Y+ +FP Y P+VF+ ++A+V V V L L+DTAGQEDY+RLRPLSY+ + ++ + +++ SY+NV KW PE+ H+ G+P++L+G K DLR DK+ A PI+ QG+ + I A Y+ECS+K ++NV+ VF A K AL Sbjct: 19 SGRKELKIVIVGDGGCGKTSLLMVYSQGSFPEHYAPSVFEKYTASVTVGSKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPMVLIGCKTDLRKDKEQLRKLRAAQLEPITYTQGQSACEQIRAALYLECSAKFRENVEDVFREAAKVAL 197
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: CDC42_COLGL (Cell division control protein 42 homolog OS=Colletotrichum gloeosporioides GN=CDC42 PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.945e-38 Identity = 85/173 (49.13%), Postives = 113/173 (65.32%), Query Frame = 2 Query: 209 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKFALQ 727 IKCV VGDGAVGKTCLLISYT+N FP++YVPTVFDN++ V++ LGL+DTAGQEDY+RLRPLSY DVF++ FS+ S AS+ENV++ PGV +++V + + + P+ GE + K +GA Y+ECS+ TQ +K VFD AI AL+ Sbjct: 6 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVARSGSRGTSP-LPGV-LLIVAPVTERGSSVREKLSKQKMSPVRKEDGERMAKDLGAVKYVECSALTQFKLKDVFDEAIVAALE 176
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RHOC_EMENI (GTP-binding protein rhoC OS=Emericella nidulans GN=rhoC PE=3 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 7.390e-38 Identity = 82/171 (47.95%), Postives = 108/171 (63.16%), Query Frame = 2 Query: 212 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV--NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQF--FIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAI 712 K V VGDG GKTCLLISY+ FP YVPTVF+N+ + +G TV L LWDTAGQE+Y+RLRPLSY D+ + F++ AS ENV KW PE+ H+ P PIILVG K DLR+ + + G P++ QG+ + + A +Y+ECSSK + V +VF A+ Sbjct: 71 KFVVVGDGGCGKTCLLISYSQGYFPEKYVPTVFENYITQTLHRRSGKTVELALWDTAGQEEYDRLRPLSYPETDLLFVCFAIDCPASLENVMDKWYPEVLHFCPTTPIILVGLKSDLRNKRTCIELLKTQGLTPVTPEQGQAVAGRMNA-SYVECSSKEMRGVDSVFQLAV 240
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RHOF_HUMAN (Rho-related GTP-binding protein RhoF OS=Homo sapiens GN=RHOF PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.646e-37 Identity = 78/174 (44.83%), Postives = 112/174 (64.37%), Query Frame = 2 Query: 209 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGA--VPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKFAL 724 +K V VGDG GKT LL+ Y+ +FP Y P+VF+ ++A+V V V L L+DTAGQEDY+RLRPLSY+ + ++ + +++ SY+NV KW PE+ H+ G+P++L+G K DLR DK+ A PI+ QG + I A Y+ECS+K ++NV+ VF A K AL Sbjct: 20 LKIVIVGDGGCGKTSLLMVYSQGSFPEHYAPSVFEKYTASVTVGSKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPMVLIGCKTDLRKDKEQLRKLRAAQLEPITYMQGLSACEQIRAALYLECSAKFRENVEDVFREAAKVAL 193
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RHO2_SCHPO (GTP-binding protein rho2 OS=Schizosaccharomyces pombe GN=rho2 PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.808e-37 Identity = 86/180 (47.78%), Postives = 110/180 (61.11%), Query Frame = 2 Query: 212 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVP---------ISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKFAL 724 K V VGDGA GKT LL +T FPT+YVPTVF+N+ ++ V+G +V L LWDTAGQE+Y RLRP+SY A + ++ F++ S S ENVS KWI E+ P VP ILVG K DLR D P A+ + + Q E + + IGA Y+ECSS T V VF+AA + AL Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSD-------PVAIEEMRRRNQNFVKSQQAELVAQRIGARKYMECSSLTGDGVDDVFEAATRAAL 182
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RHOF_MOUSE (Rho-related GTP-binding protein RhoF OS=Mus musculus GN=Rhof PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.790e-37 Identity = 78/179 (43.58%), Postives = 112/179 (62.57%), Query Frame = 2 Query: 194 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGA--VPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKFAL 724 SA + +K V VGDG GKT LL+ Y +FP Y P+VF+ ++A+V V V L L+DTAGQEDY+RLRPLSY+ + ++ + +++ SY+NV KW PE+ H+ G+P +L+G K DLR DK+ A PI+ QG + + Y+ECS+K ++NV+ VF A K AL Sbjct: 15 SARKELKIVIVGDGGCGKTSLLMVYCQGSFPEHYAPSVFEKYTASVTVGNKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPTVLIGCKTDLRKDKEQLRKLRAAQLEPITYTQGLNACEQMRGALYLECSAKFRENVEDVFREAAKVAL 193
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RHO4_ASHGO (GTP-binding protein RHO4 OS=Ashbya gossypii GN=RHO4 PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 9.988e-35 Identity = 74/173 (42.77%), Postives = 110/173 (63.58%), Query Frame = 2 Query: 209 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKFAL 724 IK V VGDGA GKT LL+SYT FP DYVPT+F+N+ N+ G + L LWDTAGQE+Y+RLRPLSY D+ ++ ++ ++ S N + W PE++H+ P P++LVG K DL + +D + + E + + +GA +++CS+KT+Q ++ VF+ AI AL Sbjct: 53 IKIVVVGDGATGKTSLLMSYTQGQFPEDYVPTIFENYVTNIEGPRGKVIELALWDTAGQEEYSRLRPLSYGDVDIVMVCYAADNRTSLTNAEELWFPEVRHFCPHAPMMLVGLKSDL-----YSLDALDRL-VDPTDAELVARKMGAFVHLQCSAKTRQCLEDVFNTAIHTAL 219
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RACM_DICDI (Rho-related protein racM OS=Dictyostelium discoideum GN=racM PE=3 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 1.304e-34 Identity = 77/175 (44.00%), Postives = 106/175 (60.57%), Query Frame = 2 Query: 209 IKCVTVGDGAVGKTCLLISYT-SNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRD-----DKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIK 715 IK VT+GD VGKT LL++YT S +FP +YVPT DNF +NG +L +WDTAG E Y+ LRPL Y D+ +L F++ ++ S+ ++ WI E+ Y PG+PIILVGTK+DLRD DK F+ + +G L K IGA + ECSS+ ++ +F IK Sbjct: 6 IKIVTIGDYGVGKTTLLMTYTASGSFPQEYVPTALDNFIHEATINGKKASLSIWDTAGGEYYHELRPLIYPETDILLLLFAIENRESFLHIKTNWITEINQYIPGIPIILVGTKIDLRDSDLIKDKSNFVKY--------KEGLALSKEIGASHFCECSSRMNLGLEELFKKVIK 172 The following BLAST results are available for this feature:
BLAST of DY271440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271440 ID=DY271440; Name=DY271440; organism=Citrus clementina; type=EST; length=918bpback to top |