DY271440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RAP1B_HUMAN (Ras-related protein Rap-1b OS=Homo sapiens GN=RAP1B PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.958e-14 Identity = 49/168 (29.17%), Postives = 85/168 (50.60%), Query Frame = 2 Query: 203 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS--KKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 700 R K V +G G VGK+ L + + F Y PT+ D++ V V+ L + DTAG E + +R L + F L +S+ +++++ ++ ++ I +K VP+ILVG K DL D++ + QG+ L + A++E S+K++ NV +F Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKD-TDDVPMILVGNKCDLEDER----------VVGKEQGQNLARQWNNCAFLESSAKSKINVNEIF 158
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RAP1B_CHICK (Ras-related protein Rap-1b OS=Gallus gallus GN=RAP1B PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.958e-14 Identity = 49/168 (29.17%), Postives = 85/168 (50.60%), Query Frame = 2 Query: 203 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS--KKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 700 R K V +G G VGK+ L + + F Y PT+ D++ V V+ L + DTAG E + +R L + F L +S+ +++++ ++ ++ I +K VP+ILVG K DL D++ + QG+ L + A++E S+K++ NV +F Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKD-TDDVPMILVGNKCDLEDER----------VVGKEQGQNLARQWNNCAFLESSAKSKINVNEIF 158
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RAP1B_BOVIN (Ras-related protein Rap-1b OS=Bos taurus GN=RAP1B PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.958e-14 Identity = 49/168 (29.17%), Postives = 85/168 (50.60%), Query Frame = 2 Query: 203 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS--KKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 700 R K V +G G VGK+ L + + F Y PT+ D++ V V+ L + DTAG E + +R L + F L +S+ +++++ ++ ++ I +K VP+ILVG K DL D++ + QG+ L + A++E S+K++ NV +F Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKD-TDDVPMILVGNKCDLEDER----------VVGKEQGQNLARQWNNCAFLESSAKSKINVNEIF 158
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RAB6A_PONAB (Ras-related protein Rab-6A OS=Pongo abelii GN=RAB6A PE=2 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 1.958e-14 Identity = 55/168 (32.74%), Postives = 86/168 (51.19%), Query Frame = 2 Query: 203 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 700 R K V +G+ +VGKT L+ + ++F Y T+ D S + + TV L LWDTAGQE + L P R + V ++ + + + S++ + KWI +++ V I+LVG K DL D +Q +S +GE K + +IE S+K NVK +F Sbjct: 12 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTT-KWIDDVRTERGSDVIIMLVGNKTDLADKRQ----------VSIEEGERKAKELNV-MFIETSAKAGYNVKQLF 167
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RAB6A_MOUSE (Ras-related protein Rab-6A OS=Mus musculus GN=Rab6a PE=1 SV=4) HSP 1 Score: 80.1073 bits (196), Expect = 1.958e-14 Identity = 55/168 (32.74%), Postives = 86/168 (51.19%), Query Frame = 2 Query: 203 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 700 R K V +G+ +VGKT L+ + ++F Y T+ D S + + TV L LWDTAGQE + L P R + V ++ + + + S++ + KWI +++ V I+LVG K DL D +Q +S +GE K + +IE S+K NVK +F Sbjct: 12 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTT-KWIDDVRTERGSDVIIMLVGNKTDLADKRQ----------VSIEEGERKAKELNV-MFIETSAKAGYNVKQLF 167
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RAB6A_HUMAN (Ras-related protein Rab-6A OS=Homo sapiens GN=RAB6A PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 1.958e-14 Identity = 55/168 (32.74%), Postives = 86/168 (51.19%), Query Frame = 2 Query: 203 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 700 R K V +G+ +VGKT L+ + ++F Y T+ D S + + TV L LWDTAGQE + L P R + V ++ + + + S++ + KWI +++ V I+LVG K DL D +Q +S +GE K + +IE S+K NVK +F Sbjct: 12 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTT-KWIDDVRTERGSDVIIMLVGNKTDLADKRQ----------VSIEEGERKAKELNV-MFIETSAKAGYNVKQLF 167
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RYH1_SCHPO (GTP-binding protein ryh1 OS=Schizosaccharomyces pombe GN=ryh1 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.558e-14 Identity = 55/168 (32.74%), Postives = 87/168 (51.79%), Query Frame = 2 Query: 203 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 700 R K V +G+ +VGKT L+ + + F Y T+ D S + + TV L LWDTAGQE + L P R + V I+ + + + S+ N ++KWI +++ V I+LVG K DL D +Q ++ +GE+ K + ++E S+K NVK +F Sbjct: 10 RKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVN-TEKWIEDVRAERGDDVIIVLVGNKTDLADKRQ----------VTQEEGEKKAKELKI-MHMETSAKAGHNVKLLF 165
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RAB4B_DANRE (Ras-related protein Rab-4B OS=Danio rerio GN=rab4b PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.558e-14 Identity = 56/166 (33.73%), Postives = 83/166 (50.00%), Query Frame = 2 Query: 212 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQF-FIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 700 K + +G GK+CLL + N F D T+ F + VV V G TV L +WDTAGQE + + YRGA +L + + S+ +Y N W+ + + A P + IIL G K DL D++ F++ AQ EL ++E S+ T +NV+ F Sbjct: 10 KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETY-NALTNWLTDARTLASPNIVIILCGNKKDLDADREVTFLE-----ASRFAQENEL-------MFLETSALTGENVEEAF 162
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RAB18_CAEEL (Ras-related protein Rab-18 OS=Caenorhabditis elegans GN=rab-18 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.558e-14 Identity = 50/176 (28.41%), Postives = 93/176 (52.84%), Query Frame = 2 Query: 209 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSA-NVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPII--LVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKFALQ 727 +K + +G+ VGK+ L++ + + F + T+ +F ++ ++G+ V L +WDTAGQE + L P YRGA I + + S++S+E ++ W+ E+ Y II +V K+D+ P V ++ +G + K +IE S+KT++ V+ F+ I+ +Q Sbjct: 12 LKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLN-HWMQEVDTYCTNDNIIKMMVANKIDM----------PNRV-VTREEGLKFAKR-HRTLFIEASAKTKEGVQCTFEELIEKIIQ 174
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RIT1_MOUSE (GTP-binding protein Rit1 OS=Mus musculus GN=Rit1 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.340e-14 Identity = 48/173 (27.75%), Postives = 85/173 (49.13%), Query Frame = 2 Query: 200 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSK-KWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIK 715 SR K V +G G VGK+ + + + S+ FP D+ PT+ D + + ++ NL + DTAGQ ++ +R R + FI+ +S+ + S+ V + K + P++LVG K DL+ +Q +S +G L + P + E S+ + + VF A ++ Sbjct: 19 SREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQ----------VSKEEGLSLAREFSCP-FFETSAAYRYYIDDVFHALVR 180 The following BLAST results are available for this feature:
BLAST of DY271440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271440 ID=DY271440; Name=DY271440; organism=Citrus clementina; type=EST; length=918bpback to top |