DY304313

Overview
NameDY304313
Unique NameDY304313
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1248
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304313 vs. ExPASy Swiss-Prot
Match: P2C31_ARATH (Protein kinase and PP2C-like domain-containing protein OS=Arabidopsis thaliana GN=At2g40860/At2g40870 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 3.422e-26
Identity = 81/226 (35.84%), Postives = 119/226 (52.65%), Query Frame = 2
Query:  335 SYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEY---VKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDA----------GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMW-AGTWRVGGV-LAVSRAFGDRLLKQYVCADPQIPEEVIDTSPDFLTLPVMGFGDVLPNEETV 967
            S G  ++ G+R SMED +         E + LF +FDGH GA AAE+   V   L  +L       +    A++ A+  TD  F + E + +R +          G TA  ++LV ++L VANVGDSRA++CR G+  A+S+ H     DER R+   GG + W   TWRV    L V+R+ GD  LK  V A+P+I E ++    +FL +   G  DV+ +EE +
Sbjct:  392 SCGSFATCGRRESMEDTHFIIPHMCNEESIHLFAIFDGHRGAAAAEFSAQVLPGLVQSLCS-----TSAGEALSQAFVRTDLAF-RQELDSHRQSKRVSQKDWHPGCTAIASLLVENKLFVANVGDSRAILCRAGHPFALSKAHLATCIDERNRVIGEGGRIEWLVDTWRVAPAGLQVTRSIGDDDLKPAVTAEPEISETILSADDEFLVMASDGLWDVMNDEEVI 611          
BLAST of DY304313 vs. ExPASy Swiss-Prot
Match: P2C27_ORYSJ (Probable protein phosphatase 2C 27 OS=Oryza sativa subsp. japonica GN=Os02g0799000 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 5.837e-26
Identity = 79/224 (35.27%), Postives = 117/224 (52.23%), Query Frame = 2
Query:  350 SSPGKRSSMEDFYETRID--------GVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNR-DAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY---------VCADPQIPEEVIDTSPDFLTLPVMGFGDVLPNEETV 967
            S  G R  MED +    D         V+ EI+  +GVFDGHGG  AA YV+ NL   ++    F  + +  +  ++  TDS+F +  ++QN   +G+TA TA++ G  LLVAN GD RAV+ R G AI +S+DH+    +ER+RIE  GG+V       + G LAV+RA GD  L+           + A+P++    +    +FL +   G  D   N+  V
Sbjct:   59 SDIGGRDYMEDAHVCISDLANNFGHNSVDDEIISFYGVFDGHGGKDAAHYVRDNLPRVIVEDADFPLELEKVVRRSFVQTDSQFAERCSHQNALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGTAIEMSKDHRTCCLNERKRIESLGGYV---DDGYLNGQLAVTRALGDWHLEGLKEVGEPGGPLSAEPELKMITLTKEDEFLIIGSDGIWDFFSNQNAV 279          
BLAST of DY304313 vs. ExPASy Swiss-Prot
Match: P2C30_ORYSJ (Probable protein phosphatase 2C 30 OS=Oryza sativa subsp. japonica GN=Os03g0268600 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 9.957e-26
Identity = 84/234 (35.90%), Postives = 116/234 (49.57%), Query Frame = 2
Query:  338 YGYASSPGKRSSMEDFYETRIDGVEGEIVG--LFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDT---------KSAIADAYSHTDSEFLKSENNQNRDA---------------GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVCADPQI-PEEVIDTSPDFLTLPVMGFGDVLPNE 958
            YG+ S  G+R  MED     +    G + G   FGVFDGHG +  A      +   ++      + +         +  +  +++  D+E + S       A               GSTA  A+L    ++VAN GDSRAV+CRGG AI +S DHKPD+ DE +RI  AGG V++    RV G+LA+SRA GD  LK YV  DP++   E  D   +FL L   G  DV+ NE
Sbjct:   78 YGFTSVCGRRRDMED----SVSACPGFLPGHHFFGVFDGHGCSHVATSCGQRMHEIVVDEAGAAAGSAGLDEEARWRGVMERSFARMDAEAVASSRGSVAPAPTCRCEMQLPKCDHVGSTAVVAVLGPRHVVVANCGDSRAVLCRGGAAIPLSCDHKPDRPDELERIHAAGGRVIFWDGARVFGMLAMSRAIGDSYLKPYVICDPEVRVMERKDGEDEFLILASDGLWDVVSNE 307          
BLAST of DY304313 vs. ExPASy Swiss-Prot
Match: P2C49_ORYSJ (Probable protein phosphatase 2C 49 OS=Oryza sativa subsp. japonica GN=Os05g0457200 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 3.784e-25
Identity = 85/251 (33.86%), Postives = 122/251 (48.61%), Query Frame = 2
Query:  296 PASGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVG----LFGVFDGHGGARAAEYVKHNLFSNLI-RHPKFISDTKSAIA---------DAYSHTDSE---FLKSENN-------------QNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVCADPQIPEEVIDTSPDFLTLPVMGFGDVLPNE 958
            P++G          YG  S  G+R  MED    R D + G         FGVFDGHG +  A   +  +   ++  + K +S  ++A A           ++  D E   + KS                +    GSTA  A++  +R++VAN GDSRAV+CR G  + +S DHKPD+ DE +RI+ AGG V++    RV GVLA+SRA GD  LK YV ++P++         + L L   G  DV+ NE
Sbjct:   78 PSAGAEFGSRWWPRYGVTSVFGRRREMEDAVSIRPDFLRGSTSSGKHHFFGVFDGHGCSHVARMCQDRMHELVVDAYKKAVSGKEAAAAAPAWKDVMEKGFARMDDEATIWAKSRTGGEPACRCELQTPARCDHVGSTAVVAVVGPNRVVVANSGDSRAVLCRAGVPVPLSVDHKPDRPDELERIKAAGGRVIYWDGARVLGVLAMSRAIGDGYLKPYVTSEPEVTVTERADDDECLILASDGLWDVVTNE 328          
BLAST of DY304313 vs. ExPASy Swiss-Prot
Match: P2C49_ARATH (Probable protein phosphatase 2C 49 OS=Arabidopsis thaliana GN=At3g62260 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 3.784e-25
Identity = 78/229 (34.06%), Postives = 121/229 (52.84%), Query Frame = 2
Query:  359 GKRSSMEDFYETRIDGVEGEIVGLF---------GVFDGHGGARAAEYVKHNLFSNLIRHPKF----------ISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK------QYVCADPQIPEEVIDTSPDFLTLPVMGFGDVLPNEETVA 970
            G + +MED +  RID +  ++  LF          VFDGHGG  AA YV+ N         +F          + + ++++ +A+   D   L  + + +   G+TA TA++ G  L+VAN GD RAV+CR G AI +S DHKP    ER+R+E++GGF+   G   +  VLAV+RA GD  LK        + ++P+I +  +    +FL +   G  DVL ++E V+
Sbjct:   86 GPKRNMEDEH-IRIDDLSSQVGSLFELPKPSAFYAVFDGHGGPEAAAYVRENAIRFFFEDEQFPQTSEVSSVYVEEVETSLRNAFLQADLA-LAEDCSISDSCGTTALTALICGRLLMVANAGDCRAVLCRKGRAIDMSEDHKPINLLERRRVEESGGFITNDG--YLNEVLAVTRALGDWDLKLPHGSQSPLISEPEIKQITLTEDDEFLVIGCDGIWDVLTSQEAVS 310          
BLAST of DY304313 vs. ExPASy Swiss-Prot
Match: P2C37_ARATH (Protein phosphatase 2C 37 OS=Arabidopsis thaliana GN=PP2CA PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 4.942e-25
Identity = 79/231 (34.20%), Postives = 114/231 (49.35%), Query Frame = 2
Query:  341 GYASSPGKRSSMEDFYETRIDGVE--GEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTK--SAIADAYSHTDSEFLKSENN---------------------QNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVCADPQIPEEVIDTSPDFLTLPVMGFGDVLPNE 958
            G  S  G+R  MED        ++   E    +GVFDGHG +  AE  +  L   + +  + ++  +    +  ++   D E  + E N                     Q    GSTA  +++  ++++V+N GDSRAV+CR G AI +S DHKPD+ DE  RI+ AGG V++    RV GVLA+SRA GD  LK YV  DP++         + L L   G  DV+PNE
Sbjct:  106 GTTSVCGRRRDMEDAVSIHPSFLQRNSENHHFYGVFDGHGCSHVAEKCRERLHDIVKKEVEVMASDEWTETMVKSFQKMDKEVSQRECNLVVNGATRSMKNSCRCELQSPQCDAVGSTAVVSVVTPEKIIVSNCGDSRAVLCRNGVAIPLSVDHKPDRPDELIRIQQAGGRVIYWDGARVLGVLAMSRAIGDNYLKPYVIPDPEVTVTDRTDEDECLILASDGLWDVVPNE 336          
BLAST of DY304313 vs. ExPASy Swiss-Prot
Match: P2C22_ARATH (Probable protein phosphatase 2C 22 OS=Arabidopsis thaliana GN=At2g25620 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 6.454e-25
Identity = 80/229 (34.93%), Postives = 120/229 (52.40%), Query Frame = 2
Query:  341 GYASSPGKRSSMEDFY---ETRIDGV-----EGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSEN-NQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY-----------VCADPQIPEEVIDTSPDFLTLPVMGFGDVLPNEETV 967
            G  S  G RSSMED Y   +  +D       E      +GVFDGHGG  AAE+  H++   ++   +F S+    ++ A+  TD+ FL++ + + +  +G+TA  AIL G  L+VAN GD RAV+ R G AI +SRDHKP  + ER+RIE +GG V       + G L V+RA GD  ++             + A+P++    +    +FL +   G  DV  ++  V
Sbjct:   91 GAWSDIGSRSSMEDAYLCVDNFMDSFGLLNSEAGPSAFYGVFDGHGGKHAAEFACHHIPRYIVEDQEFPSEINKVLSSAFLQTDTAFLEACSLDGSLASGTTALAAILFGRSLVVANAGDCRAVLSRQGKAIEMSRDHKPMSSKERRRIEASGGHVF---DGYLNGQLNVARALGDFHMEGMKKKKDGSDCGPLIAEPELMTTKLTEEDEFLIIGCDGVWDVFMSQNAV 316          
BLAST of DY304313 vs. ExPASy Swiss-Prot
Match: P2C57_ORYSJ (Probable protein phosphatase 2C 57 OS=Oryza sativa subsp. japonica GN=Os06g0597200 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.101e-24
Identity = 75/220 (34.09%), Postives = 115/220 (52.27%), Query Frame = 2
Query:  359 GKRSSMEDFY--------ETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSEN-NQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY--------VCADPQIPEEVIDTSPDFLTLPVMGFGDVLPNEETV 967
            G R +MED +        E  ++  E      +GVFDGHGG  AA++V  NL   ++    F  + + A++ A+  TD+ F  + + N +  +G+TA  A++VG  LLVAN GD RAV+C  G AI +SRDHKP    E+ RIE +GG+V       + G L V+RA GD  ++          + A+P++    +    +FL +   G  DV  ++  V
Sbjct:   75 GSRHTMEDVFICSDNLMKEFGVESFEDGPSAFYGVFDGHGGKHAADFVCSNLARFIVEDEDFPREIEKALSSAFLQTDAAFADACSVNSSLASGTTALAALVVGRSLLVANAGDCRAVLCCRGKAIEMSRDHKPSCNREKVRIEASGGYVY---DGYLNGQLNVARAIGDWHMEGMKACDGLGPLSAEPEVMIRNLTEEDEFLIIGCDGIWDVFRSQNAV 291          
BLAST of DY304313 vs. ExPASy Swiss-Prot
Match: P2C53_ORYSJ (Probable protein phosphatase 2C 53 OS=Oryza sativa subsp. japonica GN=Os05g0592800 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.101e-24
Identity = 80/248 (32.26%), Postives = 115/248 (46.37%), Query Frame = 2
Query:  338 YGYASSPGKRSSMEDFY----------------ETRIDGVEGEIVGL----FGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDT---------------KSAIADAYSHTDSEFLKSENN-----QNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVCADPQIPEEVIDTSPDFLTLPVMGFGDVLPNEE 961
            +G  S  G+R  MED Y                +  +DG++     L    F V+DGHGG + A Y +  + + L    +   D                + A  D +S  D+E   +  +          GSTA  A++    ++VAN GDSRAV+CRG   + +S DHKP++ DE  RIE  GG V+    +RV GVLA+SR+ GD+ LK Y+   P++         D L L   G  DV+ NEE
Sbjct:  125 WGLESICGRRPEMEDDYAVVPRFFDLPLWMVAGDAAVDGLDRASFRLPAHFFAVYDGHGGVQVANYCRKRIHAVLTEELRRAEDDACGSDLSGLESKKLWEKAFVDCFSRVDAEVGGNAASGAPPVAPDTVGSTAVVAVVCSSHVIVANCGDSRAVLCRGKQPLPLSLDHKPNREDEYARIEALGGKVIQWNGYRVLGVLAMSRSIGDKYLKPYIIPVPEVTVVARAKDDDCLILASDGLWDVMSNEE 372          
BLAST of DY304313 vs. ExPASy Swiss-Prot
Match: P2C04_ORYSJ (Protein kinase and PP2C-like domain-containing protein OS=Oryza sativa subsp. japonica GN=Os01g0541900 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.438e-24
Identity = 77/223 (34.53%), Postives = 115/223 (51.57%), Query Frame = 2
Query:  335 SYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFL---------KSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMW-AGTWRVG-GVLAVSRAFGDRLLKQYVCADPQIPEEVIDTSPDFLTLPVMGFGDVLPNEETVA 970
            S+G  ++ G+R +MED +       E + +  FG+FDGH G+ AAE+    +   L +     S T  A+ +A+  TD  F          K    +N   G TA TA++V ++L VAN GD RA++ R G    ++RDH      ER+RI   G  V W   TWRVG   L V+R+ GD  LK  V A P++ E ++    +FL +   G  DV+ NE+ ++
Sbjct:  390 SWGSFATCGRRETMEDTHFMLPHMSEEKDLHAFGIFDGHRGSAAAEFSVRAVPGFLKQFNSNTSPT-DALTEAFVRTDIAFREELILHQKSKRITQKNWHPGCTAVTALIVRNKLFVANAGDCRAILNRAGEPFPMTRDHVASCPKERERIVKEGTEVKWQIDTWRVGAAALQVTRSIGDDDLKPAVTAQPEVIETILSPDDEFLVMASDGLWDVMSNEDVLS 611          
The following BLAST results are available for this feature:
BLAST of DY304313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
P2C31_ARATH3.422e-2635.84Protein kinase and PP2C-like domain-containing pro... [more]
P2C27_ORYSJ5.837e-2635.27Probable protein phosphatase 2C 27 OS=Oryza sativa... [more]
P2C30_ORYSJ9.957e-2635.90Probable protein phosphatase 2C 30 OS=Oryza sativa... [more]
P2C49_ORYSJ3.784e-2533.86Probable protein phosphatase 2C 49 OS=Oryza sativa... [more]
P2C49_ARATH3.784e-2534.06Probable protein phosphatase 2C 49 OS=Arabidopsis ... [more]
P2C37_ARATH4.942e-2534.20Protein phosphatase 2C 37 OS=Arabidopsis thaliana ... [more]
P2C22_ARATH6.454e-2534.93Probable protein phosphatase 2C 22 OS=Arabidopsis ... [more]
P2C57_ORYSJ1.101e-2434.09Probable protein phosphatase 2C 57 OS=Oryza sativa... [more]
P2C53_ORYSJ1.101e-2432.26Probable protein phosphatase 2C 53 OS=Oryza sativa... [more]
P2C04_ORYSJ1.438e-2434.53Protein kinase and PP2C-like domain-containing pro... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ8YF16RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304313 ID=DY304313; Name=DY304313; organism=Citrus clementina; type=EST; length=1248bp
CGCGTTTTAAACGCGCCGTATCTTTTCTTTTATTTTCTTTTTCTCTGTTA
TGGCATTTCTTTTTACTTCTCTTCTTCAGGTTGAGCTTGATAATTCGTGA
CATTGAAATGATCTAACGAATGTGCAATCACCTATTGTAACTAACCAAAA
CGCTGTCGCTGCTGTAGTTATTGCTTTCGTTGTTATTAATTTATTTTCTC
TTCCGAGTGGTTAACGAATTGGAACTTGAAGCGAAACCATGGGGTATTTG
AACTCGGTGTTGTCATCTTCAAGCCAGGTTCACGCCGATGATTCGCCGGC
TAGCGGCGGGGGCCTTAGTCAGAACGGAAAGTTCAGCTACGGATATGCGA
GTTCTCCTGGCAAGAGGTCTTCTATGGAAGATTTTTATGAGACCAGAATT
GATGGCGTCGAAGGAGAGATAGTAGGCCTCTTTGGAGTTTTTGATGGTCA
TGGGGGTGCACGAGCTGCTGAGTATGTGAAACACAACCTCTTCAGCAATC
TGATCAGGCATCCAAAGTTCATATCTGATACCAAATCGGCAATAGCTGAT
GCATACAGCCACACAGACTCGGAATTTCTGAAGTCAGAAAACAATCAAAA
CAGGGATGCTGGATCTACTGCTTCCACTGCCATCCTTGTTGGTGATCGCT
TACTTGTTGCAAATGTGGGTGACTCCAGAGCTGTTATATGCAGGGGCGGT
AATGCTATTGCCGTATCGCGAGATCACAAACCAGACCAAACAGATGAGCG
TCAACGGATTGAGGATGCAGGAGGGTTTGTGATGTGGGCTGGAACTTGGA
GAGTGGGAGGAGTTCTTGCCGTTTCTCGCGCATTTGGTGACAGACTCTTG
AAGCAGTATGTTTGTGCTGATCCCCAAATTCCAGAGGAAGTTATTGACAC
CTCCCCTGATTTTCTTACCCTGCCAGTGATGGGCTTTGGGGATGTCCTCC
CCAATGAGGAAACCGTTGCCAATAAACAAACCAATCCAGGAATCGGAAGA
AGGCGCCAAAAAAGCTGAAAGCCAGAGGCAAATTAAAAAAGGCCACCGCA
AAACAAAATCCCCCTGTGTCTGTTGTTTTCCGTTTCTGGGCCCAACCCAA
GGGGGGGTTCAACTCTTTCCTCGGGCCCCGGGCTTGAAACTCTCCTTTAC
CATAACCCCCCCCCGCCCCGCCTTTTTTTGTTTTCTTCACACATGTGGGA
AACACCTCCCTTTTTTCAGGGTGGTTTTCTCCTACCAGCCACACCAAA
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