DY304389

Overview
NameDY304389
Unique NameDY304389
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1252
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304389 vs. ExPASy Swiss-Prot
Match: ALA2_HORVU (Alanine aminotransferase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 6.308e-12
Identity = 53/190 (27.89%), Postives = 93/190 (48.95%), Query Frame = 2
Query:  263 YSPTFGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGAN-ILIPRPGYPLYEIHAAGSNNNLEARHYDLLPGKCWEVDLDGVEALADE------NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVY------NHLAFGSTPYV--PMGVFGSIVPVISLGSISK 787
            YS + G+   R  IA  +     +  + +D++LT G S  + + + +L R   + IL+P P YPLY    A     L   + +   G  W ++   V+   ++      N  A+V+INPGNP G V + ++   I +  +N G++++ADEVY      ++  F S   +   +G     +P++S  S+SK
Sbjct:  112 YSHSQGIKGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTG--WGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSK 299          
BLAST of DY304389 vs. ExPASy Swiss-Prot
Match: DAPAT_GLOVI (LL-diaminopimelate aminotransferase OS=Gloeobacter violaceus GN=dapL PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.076e-11
Identity = 61/227 (26.87%), Postives = 97/227 (42.73%), Query Frame = 2
Query:  155 VIHLGHGDPSAFPCFRTSTVAEDAVVDALRTAHYNCYSPTFGVPSARRGIADYLNRDLPYK-LSPE-DVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPGKCWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAF-GSTPYVPMGVFGSIVPVISLGSISKRWIVPGWRLGWLV 826
            +I++G GDP       T  V  +A+  A+     + Y P  G  + R   A +  R        P+ +V  ++G  +AI  +      PG   LIP P YP+Y      +     A    LLP      DL+ V          + +  P NP G V S +  +K+   A+   I+V  D  Y+ +A+ G  P   + V G+    I   S SK + + GWR+G+++
Sbjct:   32 IINMGIGDPDK----PTPPVVLEAMHAAIDDPSTHNYPPYKGTKAYREAAAAWFERRFGVGGFHPDTEVISSIGSKEAIHNTFLAFVDPGDYTLIPDPAYPVYRTSTIFAGGEFFAM--PLLPENQLLPDLEAVPETVARKAKLLWLNYPNNPTGAVASLEFFEKVVHFAKKHDILVCHDNAYSEMAYDGYKPPSILQVPGARDVAIEFLSCSKAYNMTGWRVGFVI 252          
BLAST of DY304389 vs. ExPASy Swiss-Prot
Match: ALAT2_XENLA (Alanine aminotransferase 2 OS=Xenopus laevis GN=gpt2 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.835e-11
Identity = 50/155 (32.26%), Postives = 80/155 (51.61%), Query Frame = 2
Query:  263 YSPTFGVPSARRGIADYLNR-DLPYKLSPEDVYLTLGCSQAIEISLSVLA----RPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPGKCWEVDLDGVE-ALADE----NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVY 697
            YS + G+   R+ +A Y+ R D      P ++YL+ G S +I   L +L     +    ++IP P YPLY   AA +  +    +Y L    CW +D++ +  ALA+     +   + IINPGNP G V S + ++ + R A    + ++ADEVY
Sbjct:  167 YSASQGIEVIRQDVAKYIERRDGGILSDPNNIYLSTGASDSIVTMLKLLVSGQGKSRTGVMIPIPQYPLYS--AALAELDAVQVNYYLDEENCWALDINELRRALAEARKHCDPKVLCIINPGNPTGQVQSRKCIEDVIRFAAEENLFLMADEVY 319          
BLAST of DY304389 vs. ExPASy Swiss-Prot
Match: DAPAT_MOOTA (LL-diaminopimelate aminotransferase OS=Moorella thermoacetica (strain ATCC 39073) GN=dapL PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.397e-11
Identity = 60/224 (26.79%), Postives = 93/224 (41.52%), Query Frame = 2
Query:  155 VIHLGHGDPSAFPCFRTSTVAEDAVVDALRTAHYNCYSPTFGVPSARRGIADYLNRDLPYKLSPEDVYLTL-GCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPGKCWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAF-GSTPYVPMGVFGSIVPVISLGSISKRWIVPGWRLGW 820
            +I LG GDP       T +   D +V        + Y  + G+ + R+ +AD+  R     L P    +TL G  + I         PG   L+P PGYP+Y I    +    E+    L     +  DL  + +        + I  P NP G V   +  Q++   AR+  +IV  D  Y+ + + G      +   G+    I   S+SK + + GWRLGW
Sbjct:   32 IISLGIGDPD----MPTPSHVIDKLVAEAHNPENHRYPTSEGLLAFRQAVADWYQRLYGVDLDPRREVVTLIGSKEGIAHISLCYVDPGDINLVPDPGYPVYNIGTLLAGG--ESYFMPLTAANGFLPDLGAIPSDVARRAKLMFINYPNNPTGAVADLKFFQEVVEFARSYDLIVCHDAAYSEITYDGYRAPSFLQAPGAKEVGIEFNSVSKPYNMTGWRLGW 249          
BLAST of DY304389 vs. ExPASy Swiss-Prot
Match: ALAT2_HUMAN (Alanine aminotransferase 2 OS=Homo sapiens GN=GPT2 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.131e-11
Identity = 49/155 (31.61%), Postives = 74/155 (47.74%), Query Frame = 2
Query:  263 YSPTFGVPSARRGIADYLNR-DLPYKLSPEDVYLTLGCSQAIEISLSVLARPGAN----ILIPRPGYPLYEIHAAGSNNNLEARHYDLLPGKCWEVDLDGVEALADE-----NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVY 697
            YS + GV   R  +A Y+ R D      P+++YLT G S  I   L +L   G      ++IP P YPLY   A  S  +    +Y L    CW ++++ +     E     +   + IINPGNP G V S + ++ +   A    + ++ADEVY
Sbjct:  150 YSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYS--AVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVY 302          
BLAST of DY304389 vs. ExPASy Swiss-Prot
Match: AAT_RHILP (Aspartate aminotransferase OS=Rhizobium leguminosarum bv. phaseoli GN=aspC PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 4.089e-11
Identity = 56/230 (24.35%), Postives = 98/230 (42.61%), Query Frame = 2
Query:  149 RPVIHLGHGDPSAFPCFRTSTVAEDAVVDALRTAHYNCYSPTFGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRP---GYPLYEIHAAGSNNNLEARHYDLLPGKCWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIART-ARNLGIIVIADEVYNHLAFGSTPYV-PMGVFGSIVP-VISLGSISKRWIVPGWRLGW 820
            R VI LG G+P     F T    + A +DA+       Y+P  G+P  R+ IA    R+     S E   +  G  Q +  +      PG  + IP P    YP       G+   + A          +++    +E      T   +  +P NP G  +++  L+ +     +N  + V+ D++Y HL +G   +V P+ V   +    +++  +SK + + GWR+G+
Sbjct:   31 RDVIGLGAGEPD----FDTPDNIKKAAIDAINRGETK-YTPVSGIPELRKAIAAKFKRENGLDYSWEQTIVGTGGKQILFNAFMATLNPGDEVSIPAPYWVSYPEMVALCGGTRFFVSATQ-----EHNFKLQAADLEKAITPKTKWFIFNSPSNPTGAAYTHDELKALTDVLMKNPQVWVLTDDMYEHLTYGDFKFVTPVEVEPQLYDRTLTMNGVSKAYAMTGWRIGY 250          
BLAST of DY304389 vs. ExPASy Swiss-Prot
Match: DAPAT_DESDG (LL-diaminopimelate aminotransferase OS=Desulfovibrio desulfuricans (strain G20) GN=dapL PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.340e-11
Identity = 61/231 (26.41%), Postives = 101/231 (43.72%), Query Frame = 2
Query:  155 VIHLGHGDPSAFPCFRTSTVAEDAVVDALRTAHY---NCYSPTF-GVPSARRGIADYLNRDLPYKLSPEDVYLTL-GCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPGKCWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAF--GSTPYVPMGVFGSIVPVISLGSISKRWIVPGWRLGWLV 826
            +I LG GDP             D V++AL+ A     N   P++ G+ + R+ +A++  R    +L P+   LTL G  + I    +    PG  +L+  P YP+Y I +      ++     LL    +  DLD V+    E    I +  P NP   +      +K+   AR   +IV+ D  Y  + +   + P   M + G++   I   S+SK + + GWR+   V
Sbjct:   35 IISLGIGDPDM--------PTPDFVIEALKKAAEKPANHQYPSYTGMLAFRQEVANWYKRRYAVELDPKTEVLTLIGSKEGIAHFPTAFVNPGDLVLVCPPCYPVYAIASRFMGGVVQ--ELPLLEENDFLPDLDAVDEATWEKARCIFVNYPNNPTAAMAPRSFFEKLIGIARKHNVIVVHDAAYTEMYYNENNRPLSIMEIPGAMDVAIEFNSLSKPYNMTGWRIAMAV 255          
BLAST of DY304389 vs. ExPASy Swiss-Prot
Match: ALAT2_MOUSE (Alanine aminotransferase 2 OS=Mus musculus GN=Gpt2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.340e-11
Identity = 47/154 (30.52%), Postives = 73/154 (47.40%), Query Frame = 2
Query:  263 YSPTFGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGAN----ILIPRPGYPLYEIHAAGSNNNLEARHYDLLPGKCWEVDLDGVEALADE-----NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVY 697
            YS + GV   R  +A ++ R       P+++YLT G S  I   L +L   G      ++IP P YPLY   A  S  +    +Y L    CW +++D +     +     +   + IINPGNP G V S + ++ +   A    + ++ADEVY
Sbjct:  150 YSASQGVNCIREDVAAFITRRDGVPADPDNIYLTTGASDGISTILKLLVSGGGKSRTGVMIPIPQYPLYS--AVISELDAVQVNYYLDEENCWALNVDELRRALRQAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVY 301          
BLAST of DY304389 vs. ExPASy Swiss-Prot
Match: ALAT2_DANRE (Alanine aminotransferase 2-like OS=Danio rerio GN=gpt2l PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 5.340e-11
Identity = 51/157 (32.48%), Postives = 77/157 (49.04%), Query Frame = 2
Query:  263 YSPTFGVPSARRGIADYLNR-DLPYKLSPEDVYLTLGCSQAIEISLSVLA------RPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPGKCWEVDLDGVE-----ALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVY 697
            Y+ + G+   R+ +A Y+ R D      P+++YLT G S  I   L +L       R G  I IP+  YPLY   A+ +       +Y L   KCW +D+  ++     A    N   + IINPGNP G V S Q ++ + + A    + ++ADEVY
Sbjct:  176 YTTSQGIDCVRQDVAKYIERRDGGIPSDPDNIYLTTGASDGIVTILKLLTAGEGLTRTGVMISIPQ--YPLYS--ASIAELGAVQINYYLNEEKCWSLDISELQRSLQAARKHCNPRVLCIINPGNPTGQVQSRQCIEDVIQFAAKENLFLMADEVY 328          
BLAST of DY304389 vs. ExPASy Swiss-Prot
Match: DAPAT_CHLAB (LL-diaminopimelate aminotransferase OS=Chlamydophila abortus GN=dapL PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.974e-11
Identity = 75/281 (26.69%), Postives = 118/281 (41.99%), Query Frame = 2
Query:   59 RHNDNKTTSSA-VTIRGVLTSLKENLNEKDKRPVIHLGHGDPSAFPCFRTSTVAEDAVVDALRTAH-YNCYSPTFGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPGKCWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVIADEVYNHLAFGSTPYVPMGVF---GSIVPVISLGSISKRWIVPGWRLGWLVTSDPNGILSNSGFVDSIRGW 886
            R N N +   A     G+   ++    +  +  +I L  GD S +P   +        V+ L     Y  Y P  G+P+ R  +++        ++SPE+++++ G    I    S+   PG  I +  P YP+Y   A  + +    R    LP  C +      E   DE      I +P NP G V + + L+++   A   G I++ D  Y+  AF S P +P  +F   G+    I + S SK     G RLGW V   P  +  N G +  IR W
Sbjct:    2 RRNTNFSNLEANYLFSGIRQKIQAFRKQHPEASIIDLSIGDTS-YPLHTSVIHTFTQSVEKLGNPKTYRGYGPELGLPALREKLSEVFYHG---QVSPEEIFISEGAKMDIFRIFSLFG-PGKTIAVQDPSYPVYIDTALLTGS----RKIIKLP--CTKETHFFPEIPQDEAIDIFCICSPNNPTGTVLNREQLKELVDYANAQGSIILFDAAYS--AFISDPTLPTSIFDIPGARSCAIEVNSFSKSLGFAGVRLGWNVV--PKDLQYNDG-LPVIRDW 266          
The following BLAST results are available for this feature:
BLAST of DY304389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
ALA2_HORVU6.308e-1227.89Alanine aminotransferase 2 OS=Hordeum vulgare PE=2... [more]
DAPAT_GLOVI1.076e-1126.87LL-diaminopimelate aminotransferase OS=Gloeobacter... [more]
ALAT2_XENLA1.835e-1132.26Alanine aminotransferase 2 OS=Xenopus laevis GN=gp... [more]
DAPAT_MOOTA2.397e-1126.79LL-diaminopimelate aminotransferase OS=Moorella th... [more]
ALAT2_HUMAN3.131e-1131.61Alanine aminotransferase 2 OS=Homo sapiens GN=GPT2... [more]
AAT_RHILP4.089e-1124.35Aspartate aminotransferase OS=Rhizobium leguminosa... [more]
DAPAT_DESDG5.340e-1126.41LL-diaminopimelate aminotransferase OS=Desulfovibr... [more]
ALAT2_MOUSE5.340e-1130.52Alanine aminotransferase 2 OS=Mus musculus GN=Gpt2... [more]
ALAT2_DANRE5.340e-1132.48Alanine aminotransferase 2-like OS=Danio rerio GN=... [more]
DAPAT_CHLAB6.974e-1126.69LL-diaminopimelate aminotransferase OS=Chlamydophi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ8YJ03RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304389 ID=DY304389; Name=DY304389; organism=Citrus clementina; type=EST; length=1252bp
CGAGTCTCTCCTTCATCAGAAATTGAGTCTTTTTGGTGTTAACCCGAAAA
AAGAGGAGCGCCACAACGACAACAAGACCACTTCTTCAGCCGTTACCATT
CGAGGAGTCCTCACTTCCTTAAAAGAGAATCTGAACGAAAAGGACAAGAG
ACCCGTCATTCACCTTGGCCACGGCGACCCCTCGGCGTTTCCTTGCTTTC
GGACAAGCACCGTAGCCGAAGATGCCGTCGTCGATGCTCTCCGGACTGCC
CACTACAACTGCTATTCGCCCACCTTTGGTGTTCCTTCTGCTAGAAGGGG
CATAGCTGATTATCTGAACCGTGACCTCCCATACAAGTTATCACCGGAAG
ATGTTTATCTCACACTTGGATGTAGCCAAGCAATCGAAATATCATTATCG
GTCCTCGCTCGTCCTGGTGCCAATATTTTGATTCCAAGGCCCGGCTACCC
TTTATATGAAATTCATGCAGCAGGGAGTAACAACAACCTTGAAGCTCGCC
ATTATGATCTTCTTCCTGGAAAGTGTTGGGAAGTGGATCTTGATGGAGTT
GAAGCCCTTGCAGATGAGAATACAGTTGCCATTGTCATCATAAACCCTGG
CAATCCATGCGGAAATGTCTTCAGTTACCAACATCTGCAGAAAATTGCGC
GGACAGCAAGAAATCTTGGGATTATTGTGATTGCTGATGAAGTTTACAAT
CACCTTGCATTTGGGAGCACGCCTTATGTGCCAATGGGAGTTTTCGGGTC
AATTGTGCCTGTTATCAGTCTTGGGTCTATATCAAAGAGATGGATTGTTC
CTGGCTGGCGCCTCGGATGGCTTGTGACAAGTGACCCCAATGGCATCCTT
TCAAATTCAGGATTTGTTGATTCCATAAGGGGCTGGTCTCATGCAGCCTC
TCATCCTGTAACTTTCATTCACGCACCATTGCCCCGTATAGTTTACAAAA
CAAATGAGGCTTTCTTTGGAAAAATCCTTGGGCTTACTAAAAAAAACGGC
GAAAATATGGTTTGGAAAGAATTAAGGGAAAATCCTTGGTTAAACCTGCC
CCAGGGAAAACAACAAGGGGGCCCAGGGTTTGTCAGGGGGGGAAGCCTAA
AACCTTTTTGGAGTGCCTTGAAAAACTTTGGGTGGGATGGACTTTTGGAA
TTTTCGGGTTCCCCAAAAACTTTGGCTAAAAAAGAGAGAAATACGACCTT
CTTTTTGTTTTTTTAATCCCGGGGGGGGCACAACAAACGGGGGGGGGGGG
AG
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