DY304403
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304403 vs. ExPASy Swiss-Prot
Match: RACF2_DICDI (Rho-related protein racF2 OS=Dictyostelium discoideum GN=racF2 PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 2.955e-49 Identity = 97/190 (51.05%), Postives = 131/190 (68.95%), Query Frame = 3 Query: 159 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPSVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQV----KKRKKPRCSLL 716 K V+VGDGA GKTC+LI ++ + FP Y+PTVF+NY A++ +DGK L LWDTAGQE+YDRLRPLSYP TDV L+CFS+ S S EN+ KW EV H P VPI+LVG K+D+RND +I +L++ E V ++G A++INA YLE SA ++ GV+ VF+ R+ + KK KK C+++ Sbjct: 5 KCVVVGDGAVGKTCMLISYTTNGFPSEYLPTVFDNYCANLMLDGKPYSLGLWDTAGQEEYDRLRPLSYPQTDVFLICFSIISQSSFENVSTKWFKEVNHHAPGVPIVLVGTKQDIRNDNDSIKKLKERNIELVPYEKGLEKAKEINAI-YLEASALTQRGVKNVFDQCIRSVIYPNKLNKKPKKKTCTIM 193
BLAST of DY304403 vs. ExPASy Swiss-Prot
Match: RHO3_YEAST (GTP-binding protein RHO3 OS=Saccharomyces cerevisiae GN=RHO3 PE=1 SV=2) HSP 1 Score: 193.741 bits (491), Expect = 1.915e-48 Identity = 106/230 (46.09%), Postives = 140/230 (60.87%), Query Frame = 3 Query: 111 CCSSSANSEPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPSVPIILVGNKKDLRNDPATINEL--RKMKQEP-------------------VKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAAL-------QVKKRKKPRCSLL 716 C S+S +++P I +K+VI+GDGACGKT LL VF++ FPEVY PTVFENY+ DI VD K + L+LWDTAGQE++DRLR LSY DT I++CFS+DS DSLEN+ KW E+ C V ++LV K DLRN+ N + ++Q+ + +EG AMA+KI A YLECSAK +GV E F A R AL +VK C+++ Sbjct: 5 CGSASTSNKP---IERKIVILGDGACGKTSLLNVFTRGYFPEVYEPTVFENYIHDIFVDSKHITLSLWDTAGQEEFDRLRSLSYSDTQCIMLCFSIDSRDSLENVQNKWVGEITDHCEGVKLVLVALKCDLRNNENESNAITPNNIQQDNSVSNDNGNNINSTSNGKNLISYEEGLAMAKKIGALRYLECSAKLNKGVNEAFTEAARVALTAGPVATEVKSDSGSSCTIM 231
BLAST of DY304403 vs. ExPASy Swiss-Prot
Match: RHO2_YEAST (GTP-binding protein RHO2 OS=Saccharomyces cerevisiae GN=RHO2 PE=1 SV=2) HSP 1 Score: 193.741 bits (491), Expect = 1.915e-48 Identity = 100/190 (52.63%), Postives = 127/190 (66.84%), Query Frame = 3 Query: 147 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPSVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKRKKPRCSLL 716 A+R+KLVI+GDGACGKT LL VF+ +FPE Y PTVFENYV D VDG +V L LWDTAGQE+Y+RLRP SY D+IL+ F+VD+ +SL N KW E +CP PI+LVG KKDLR + A E E V ++ + +A I A Y+ECSA + EGV +VFE ATR +L +KK C ++ Sbjct: 5 AVRRKLVIIGDGACGKTSLLYVFTLGKFPEQYHPTVFENYVTDCRVDGIKVSLTLWDTAGQEEYERLRPFSYSKADIILIGFAVDNFESLINARTKWADEALRYCPDAPIVLVGLKKDLRQE-AHFKE--NATDEMVPIEDAKQVARAIGAKKYMECSALTGEGVDDVFEVATRTSLLMKKEPGANCCII 191
BLAST of DY304403 vs. ExPASy Swiss-Prot
Match: RND2_MOUSE (Rho-related GTP-binding protein RhoN OS=Mus musculus GN=Rnd2 PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 3.267e-48 Identity = 86/176 (48.86%), Postives = 127/176 (72.16%), Query Frame = 3 Query: 153 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPSVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKE-GVREVFETATRAAL 677 R K+V+VGD CGKT LL VF+KD +P YVPTVFENY A E+D +++EL +WDT+G YD +RPL+YPD+D +L+CF + P++L+++ +KW E + FCP+ ++LVG K D+R D AT+ EL K + PV ++G +A+++ A +Y+ECS++S E VR+VF AT A+L Sbjct: 7 RCKIVVVGDAECGKTALLQVFAKDAYPGSYVPTVFENYTASFEIDKRRIELNMWDTSGSSYYDNVRPLAYPDSDAVLICFDISRPETLDSVLKKWQGETQEFCPNAKVVLVGCKLDMRTDLATLRELSKQRLIPVTHEQGTVLAKQVGAVSYVECSSRSSERSVRDVFHVATVASL 182
BLAST of DY304403 vs. ExPASy Swiss-Prot
Match: RND2_HUMAN (Rho-related GTP-binding protein RhoN OS=Homo sapiens GN=RND2 PE=1 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 3.267e-48 Identity = 86/176 (48.86%), Postives = 127/176 (72.16%), Query Frame = 3 Query: 153 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPSVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKE-GVREVFETATRAAL 677 R K+V+VGD CGKT LL VF+KD +P YVPTVFENY A E+D +++EL +WDT+G YD +RPL+YPD+D +L+CF + P++L+++ +KW E + FCP+ ++LVG K D+R D AT+ EL K + PV ++G +A+++ A +Y+ECS++S E VR+VF AT A+L Sbjct: 7 RCKIVVVGDAECGKTALLQVFAKDAYPGSYVPTVFENYTASFEIDKRRIELNMWDTSGSSYYDNVRPLAYPDSDAVLICFDISRPETLDSVLKKWQGETQEFCPNAKVVLVGCKLDMRTDLATLRELSKQRLIPVTHEQGTVLAKQVGAVSYVECSSRSSERSVRDVFHVATVASL 182
BLAST of DY304403 vs. ExPASy Swiss-Prot
Match: RHOF_MOUSE (Rho-related GTP-binding protein RhoF OS=Mus musculus GN=Rhof PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 1.621e-47 Identity = 93/190 (48.95%), Postives = 126/190 (66.32%), Query Frame = 3 Query: 159 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPSVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAAL----QVKKRKKPRCSLL 716 K+VIVGDG CGKT LL+V+ + FPE Y P+VFE Y A + V K+V L L+DTAGQEDYDRLRPLSY +T ++L+C+ V +P S +N+ KW PEV HFC +P +L+G K DLR D + +LR + EP+ +G E++ YLECSAK +E V +VF A + AL + +++KK R LL Sbjct: 21 KIVIVGDGGCGKTSLLMVYCQGSFPEHYAPSVFEKYTASVTVGNKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPTVLIGCKTDLRKDKEQLRKLRAAQLEPITYTQGLNACEQMRGALYLECSAKFRENVEDVFREAAKVALSALKKAQRQKKHRICLL 210
BLAST of DY304403 vs. ExPASy Swiss-Prot
Match: RACD_DICDI (Rho-related protein racD OS=Dictyostelium discoideum GN=racD PE=2 SV=3) HSP 1 Score: 190.274 bits (482), Expect = 2.118e-47 Identity = 93/172 (54.07%), Postives = 119/172 (69.19%), Query Frame = 3 Query: 159 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPSVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAA 674 K+V+VGDGA GKT LLI+++ FP+ YVPTVF+N+ D K V L LWDTAGQEDYD LRPLSYP TDV ++C+SV DSL+NI KW PE+ PIILVG K DLR D T+++L++ KQEPV EG A+A++I A + ECSA + GV ++F A +AA Sbjct: 10 KVVVVGDGAVGKTSLLILYTTKAFPKDYVPTVFDNFNCLEMYDNKPVNLVLWDTAGQEDYDNLRPLSYPQTDVFIICYSVVKRDSLDNIKYKWLPEINQTNQGTPIILVGTKTDLREDKKTLSQLQESKQEPVSRDEGVALAKEIGAVQFFECSALTGNGVNDIFAAAIKAA 181
BLAST of DY304403 vs. ExPASy Swiss-Prot
Match: RHO3_ASHGO (GTP-binding protein RHO3 OS=Ashbya gossypii GN=RHO3 PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 2.766e-47 Identity = 102/202 (50.50%), Postives = 128/202 (63.37%), Query Frame = 3 Query: 111 CCSSSANSEPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPSVPIILVGNKKDLRNDPATINE-------LRKMKQEP------VKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAAL 677 C SSS++ P I +K+VI+GDGACGKT LL VF++ FP+VY PTVFENY+ DI VD + + L+LWDTAGQE++DRLR LSY DT I++CFSVDS DSLEN+ KW E+ C V ++LV K DLR+ NE ++ K + EG AMA++I A YLECSAK GV E F A R AL Sbjct: 4 CGSSSSSKHP---IERKIVILGDGACGKTSLLNVFTRGYFPKVYEPTVFENYIHDIFVDNQHITLSLWDTAGQEEFDRLRSLSYSDTHTIMLCFSVDSRDSLENVKNKWVSEIADHCEGVKLVLVALKCDLRSSDEYGNESAITPGSIQNQKYNGGGGNGLIPYDEGLAMAKQIGALRYLECSAKMNRGVNEAFTEAARCAL 202
BLAST of DY304403 vs. ExPASy Swiss-Prot
Match: RHO1_PEA (Rac-like GTP-binding protein RHO1 OS=Pisum sativum GN=RHO1 PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 3.612e-47 Identity = 97/192 (50.52%), Postives = 128/192 (66.67%), Query Frame = 3 Query: 159 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPSVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKRKKPR------CSLL 716 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE+KH+ P VPIILVG K DLR+D + P+ +G + + INA AY+ECS+KS++ V+ VF+ A R LQ K+KK + CS+L Sbjct: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--VDHPGAVPITTAQGEELRKLINAPAYIECSSKSQQNVKAVFDAAIRVVLQPPKQKKKKSKAQKACSIL 197
BLAST of DY304403 vs. ExPASy Swiss-Prot
Match: RHO4_YEAST (GTP-binding protein RHO4 OS=Saccharomyces cerevisiae GN=RHO4 PE=1 SV=2) HSP 1 Score: 188.734 bits (478), Expect = 6.161e-47 Identity = 92/174 (52.87%), Postives = 127/174 (72.99%), Query Frame = 3 Query: 159 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIE-VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPSVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAAL 677 K+V+VGDGA GKTCLLI + + FP Y+PT+FENYV +IE +G+ +ELALWDTAGQE+Y RLRPLSY + DV+++C+SV S SL+N+ + W PEVKHFCPS PI+LVG K DL + +++L V+P ++A+++ AFA+++CSA+ KE + EVFETA L Sbjct: 74 KIVVVGDGAVGKTCLLISYVQGTFPTDYIPTIFENYVTNIEGPNGQIIELALWDTAGQEEYSRLRPLSYTNADVLMVCYSVGSKTSLKNVEDLWFPEVKHFCPSTPIMLVGLKSDL-YEADNLSDL-------VEPSSAESLAKRLGAFAHIQCSARLKENIDEVFETAIHTLL 239 The following BLAST results are available for this feature:
BLAST of DY304403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304403 ID=DY304403; Name=DY304403; organism=Citrus clementina; type=EST; length=1271bpback to top |