DY304404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304404 vs. ExPASy Swiss-Prot
Match: LEU3_SYNSC (3-isopropylmalate dehydrogenase OS=Synechococcus sp. (strain CC9605) GN=leuB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 7.280e-11 Identity = 64/256 (25.00%), Postives = 119/256 (46.48%), Query Frame = 1 Query: 178 KCTLIPGDGVGPELVYSVQEVFKAANIPVDFESFFF------SEVNPTLSAPLEDVVNSIARNKICIKGILATPDFS---HTGELQTLNMKLRNALDLYANVVHVKSLPNVKSRHN-------DVDCIIIREQTEGEY-----SALEHEGVPGVVECLKIITAAKSERIAKFAFDYAVKMGRKKVTAVHKANIMKLGDGLFLRSCEEMAKLYPRITFEKMILDNCTLQMVSNPNPFDVRVTPNPYRHIVDNLASGL 882 + L+PGDG+GPE+ +++ + + F F S ++ T +++ + + +P F +T + LR ++L+AN+ VK +P + + VD +++RE T G Y +E EG + +A++ +RIAK AF+ A + R ++ +V KAN++ + L+ + MA Y + M +DN +Q+V +P FDV +T N + I+ + A+ L Sbjct: 5 RVVLLPGDGIGPEITAVARQLLEVVSRRHGFSLSFEEQPIGGSAIDATGEPLPASTLDACKAADAVLLAAIGSPCFDSLPREKRPETGLLGLRAGMELFANLRPVKIVPALIDASSLKREVIEGVDLMVVRELTGGIYFGQPKGRIETEGDERGFNTMTY-SASEVDRIAKVAFEIAQER-RGRLCSVDKANVLDVSQ-LWRDRVDAMAPSYGPVEVSHMYVDNAAMQLVRDPRQFDVLLTGNLFGDILSDEAAML 257
BLAST of DY304404 vs. ExPASy Swiss-Prot
Match: LEU3_STRT2 (3-isopropylmalate dehydrogenase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=leuB PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 7.280e-11 Identity = 66/253 (26.09%), Postives = 116/253 (45.85%), Query Frame = 1 Query: 178 KCTLIPGDGVGPELVYSVQEVFKAANIPVDFE----------SFFFSEVNPTLSAPLEDVVNSIARNKICIKGILATPDFSHTGELQTLNM-KLRNALDLYANVVHVKSLPNVK-------SRHNDVDCIIIREQTEGEYSALEHEGVPGVVECLKIITAAKSERIAKFAFDYAVKMGRKKVTAVHKANIMKLGDGLFLRSCEEMAKLYPRITFEKMILDNCTLQMVSNPNPFDVRVTPNPYRHIVDNLASGL 882 K + GDG+GPE++ + V ++F+ + +E +P A LE ++ A I G P + + + +R L+L+AN+ V+ +K R VD +++RE T G Y EH + +A + RI + AF A G KKVT++ K N++ L+ + +E++ +P +T E ++D+ + M++NP FDV VT N + I+ + +S L Sbjct: 4 KIVTLSGDGIGPEIMAAGLGVLDKVASKIEFDYDVDAKPFGGAGIDAEGHPLPKATLEAAKSADAILLAAIGG----PKYDNAPVRPEQGLLAIRKELNLFANIRPVRIFDALKHLSPLKPERIEGVDFVVVRELTGGIYFG-EHILEEDKARDINDYSADEIRRIMRRAFKIAQGRG-KKVTSIDKQNVLATSK-LWRKVADEVSLEFPDVTLEHQLVDSAAMIMITNPARFDVVVTENLFGDILSDESSVL 249
BLAST of DY304404 vs. ExPASy Swiss-Prot
Match: LEU3_STRT1 (3-isopropylmalate dehydrogenase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=leuB PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 7.280e-11 Identity = 66/253 (26.09%), Postives = 116/253 (45.85%), Query Frame = 1 Query: 178 KCTLIPGDGVGPELVYSVQEVFKAANIPVDFE----------SFFFSEVNPTLSAPLEDVVNSIARNKICIKGILATPDFSHTGELQTLNM-KLRNALDLYANVVHVKSLPNVK-------SRHNDVDCIIIREQTEGEYSALEHEGVPGVVECLKIITAAKSERIAKFAFDYAVKMGRKKVTAVHKANIMKLGDGLFLRSCEEMAKLYPRITFEKMILDNCTLQMVSNPNPFDVRVTPNPYRHIVDNLASGL 882 K + GDG+GPE++ + V ++F+ + +E +P A LE ++ A I G P + + + +R L+L+AN+ V+ +K R VD +++RE T G Y EH + +A + RI + AF A G KKVT++ K N++ L+ + +E++ +P +T E ++D+ + M++NP FDV VT N + I+ + +S L Sbjct: 4 KIVTLSGDGIGPEIMAAGLGVLDKVASKIEFDYDVDAKPFGGAGIDAEGHPLPKATLEAAKSADAILLAAIGG----PKYDNAPVRPEQGLLAIRKELNLFANIRPVRIFDALKHLSPLKPERIEGVDFVVVRELTGGIYFG-EHILEEDKARDINDYSADEIRRIMRRAFKIAQGRG-KKVTSIDKQNVLATSK-LWRKVADEVSLEFPDVTLEHQLVDSAAMIMITNPARFDVVVTENLFGDILSDESSVL 249
BLAST of DY304404 vs. ExPASy Swiss-Prot
Match: LEU3_RHOFD (3-isopropylmalate dehydrogenase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=leuB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 7.280e-11 Identity = 72/260 (27.69%), Postives = 118/260 (45.38%), Query Frame = 1 Query: 175 IKCTLIPGDGVGPELVYSVQEVFKAANIPVDFESFFFS-EVNPTLSAPLEDVVNSIARNKICIKGILATPDFSHTGELQTLN-----MKLRNALDLYAN---VVHVKSLPNVKSRHNDV----DCIIIRE--------QTEGEYSALEHEGVPGVVECLKIITAAKSE--RIAKFAFDYAVKMGRKKVTAVHKANIMKLGDGLFLRSC-EEMAKLYPRITFEKMILDNCTLQMVSNPNPFDVRVTPNPYRHIVDNLASGL 882 +K ++PGDG+G E+V +V A ++ ++ E+ PL D +A+ + A D+ + + L + LR L L+AN + + L + S ++ D +IIRE Q G +A + PG E + ++ E RIA AF A K K+VT+V KAN+++ F R E+ + YP + + M +DN +Q+V P FDV VT N + I+ + A+ L Sbjct: 1 MKIAVLPGDGIGTEIVAEAVKVLNALDLKLEMETALVGGAAYEAFGHPLPDATLKLAKEADAVL-FGAVGDWKYDKLDRPLRPEQAILGLRKNLGLFANFRPAICYEQLVDASSLKPELIAGLDILIIRELTGDIYFGQPRGRRTATDGH-FPGAEEAFDTMRYSRPEIERIAHVAFQAARKRS-KRVTSVDKANVLETFQ--FWRDVLTEVGQQYPDVELDHMYVDNAAMQLVRAPKKFDVVVTGNLFGDILSDEAAML 255
BLAST of DY304404 vs. ExPASy Swiss-Prot
Match: LEU3_CHRSD (3-isopropylmalate dehydrogenase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=leuB PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 7.280e-11 Identity = 67/256 (26.17%), Postives = 112/256 (43.75%), Query Frame = 1 Query: 178 KCTLIPGDGVGPELVYSVQEVFKA---ANIPVDFESFFFSEVNPT---LSAPLEDVVNSIARNKICIKGILATPDFSHTGELQTLNMK----LRNALDLYANVVHVKSLPNVKSRHN-------DVDCIIIREQTEGEY----SALEHEGVPGVVECLKIITAAKSERIAKFAFDYAVKMGRKKVTAVHKANIMKLGDGLFLRSCEEMAKLYPRITFEKMILDNCTLQMVSNPNPFDVRVTPNPYRHIVDNLASGL 882 K ++PGDG+GPE+ ++ A A + E + P E + ++ A + + + G + P + +L K LR L+L+ N+ P + S + +D +I+RE T G Y +E V I + ERI + AF+ A + G K + +V KAN+++ L+ E +A YP + M +DN +Q+V P FDV VT N + I+ + A+ L Sbjct: 4 KILVLPGDGIGPEITREAVKILNACREAGLEASIEEGLVGGAGIDAHGVPLPDETLASAKAADAVLL-GAVGGPQWDKIEDLSKRPEKGLLGLRKNLNLFGNLRPALLYPQLASASSLKPEIVAGLDIMIVRELTGGIYFGQPRGIEERDGERVGYNTYIYAEHEIERIGRVAFEMARERGGK-LCSVDKANVLE-ATILWREVMERLAPEYPDVALSHMYVDNAAMQLVRAPKQFDVIVTGNMFGDILSDAAAML 256
BLAST of DY304404 vs. ExPASy Swiss-Prot
Match: LEU3_BUCCC (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Cinara cedri GN=leuB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 7.280e-11 Identity = 60/267 (22.47%), Postives = 123/267 (46.07%), Query Frame = 1 Query: 160 EKEGRIKCTLIPGDGVGPELVYSVQEVFKAANIPVDFESFFFSEVN------PTLSAPL-EDVVNSIARNKICIKGILATPDFSHTGELQTLN----MKLRNALDLYANVVHVK---SLPNVKSRHNDV-----DCIIIREQTEGEYSAL-------EHEGVPGVVECLKIITAAKSERIAKFAFDYAVKMGRKKVTAVHKANIMKLGDGLFLRSCEEMAKLYPRITFEKMILDNCTLQMVSNPNPFDVRVTPNPYRHIVDNLASGL 882 +K+ + ++PGDG+GPE++ ++ N DF + + +E + APL + +N + + G + +++H + + LR +L+ N+ +K SL + ++ D + +RE G Y L + + + +I + + E+IA AF ++K +KKV ++ KAN+++ L+ +++K YP + + +DN +Q++ NPN FDV + N + I+ + + L Sbjct: 2 KKKKEYRIAVLPGDGIGPEVMQEAYKILNVINKKFDF-NIYTNEYDIGGIAIDKYGAPLPKKTLNGCIESHAILFGSIGGKEWTHLPADEQPERGGLLPLRKFFNLFVNLRPIKLHFSLKKLSPLKKEIIQDGFDILCVRELIGGIYFGLPKGKNTFDKKNISAFDT--EIYSTKEIEKIADIAFQLSLKR-KKKVFSIDKANVLE-SSMLWREVVIQVSKRYPNVELIHLYIDNAAMQLIKNPNQFDVILCSNLFGDILSDECAAL 263
BLAST of DY304404 vs. ExPASy Swiss-Prot
Match: IDH_HELPJ (Isocitrate dehydrogenase [NADP] OS=Helicobacter pylori J99 GN=icd PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 7.280e-11 Identity = 76/328 (23.17%), Postives = 124/328 (37.80%), Query Frame = 1 Query: 190 IPGDGVGPELV--------YSVQEVFKAANIPVDFESFF----------FSEVNPTLSAPLEDVVNSIARNKICIKGILATPDFSHTGE-LQTLNMKLRNALDLYANVVHVK--SLPNVKSRHNDVDCIIIREQTEGEYSALEHEGVPGVVECLKI-------------------------ITAAKSERIAKFAFDYAVKMGRKKVTAVHKANIMKLGDGLFLRSCEEMA--------------------KLYPRITFEKMILDNCTLQMVSNPNPFDVRVTPNPYRHIVDNLASGLVXXXXXXXXXXXXXXXXXXXSNRGPGPTFSG 975 I GDG+G ++ +VQ+ +K +E F E++P L D + +I K+ IKG L TP GE ++LN+ LR +DLY + V+ P+ VD +I RE +E Y+ +E + G E K+ I+ +ER+ + A +YA+ + VT VHK NIMK +G F++ +A K I + MI D Q++ P+ + V T N + + + +V + G P ++G Sbjct: 35 IEGDGIGSDITPAMIKVVDSAVQKAYKGEKKIAWYEVFVGEKCYQKFKDHKELSPEEQWLLPDTIEAINHYKVSIKGPLTTP----IGEGFRSLNVALRQKMDLYVCLRPVRWYGSPSPVKEPQKVDMVIFRENSEDIYAGIEWQ--EGSAEAKKLIHFLQNELKVEKIRFPESSGVGIKPISKEGTERLVRKAIEYAIDNDKPSVTFVHKGNIMKYTEGAFMKWGYALAQKEFNAQVIDKGPWCSLKNPKTGKEIIIKDMIADAFLQQILLRPSEYSVIATMNLNGDYISDALAAMVGGIGIAPGANLNDTVGMFEATHGTAPKYAG 356
BLAST of DY304404 vs. ExPASy Swiss-Prot
Match: LEU3_SYNS9 (3-isopropylmalate dehydrogenase OS=Synechococcus sp. (strain CC9902) GN=leuB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.508e-11 Identity = 63/256 (24.61%), Postives = 117/256 (45.70%), Query Frame = 1 Query: 178 KCTLIPGDGVGPELVYSVQEVFKAANIPVDFESFFF------SEVNPTLSAPLEDVVNSIARNKICIKGILATPDFS---HTGELQTLNMKLRNALDLYANVVHVKSLPNVKSRHN-------DVDCIIIREQTEGEY-----SALEHEGVPGVVECLKIITAAKSERIAKFAFDYAVKMGRKKVTAVHKANIMKLGDGLFLRSCEEMAKLYPRITFEKMILDNCTLQMVSNPNPFDVRVTPNPYRHIVDNLASGL 882 + L+PGDG+GPE+ +++ F+ F S ++ T + + + + +P F +T + LR+ L+L+AN+ VK +P + + VD +++RE T G Y +E +G + +A++ +RIAK AF+ A + + + +V KAN++ + L+ + MA Y + M +DN +Q+V +P FDV +T N + I+ + A+ L Sbjct: 5 RVVLLPGDGIGPEITAVARQLLDVVAQRHGFQLMFEEQPIGGSAIDATGEPLPASTLTACRSADAVLLAAIGSPRFDSLPREKRPETGLLGLRSGLELFANLRPVKIVPALIGASSLKQEVIEGVDLMVVRELTGGIYFGQPKGRIEADGDERGFNTMTY-SASEVDRIAKVAFEIAGERNNR-LCSVDKANVLDVSQ-LWRDRVDAMAPRYGEVDVSHMYVDNAAMQLVRDPRQFDVLLTGNLFGDILSDEAAML 257
BLAST of DY304404 vs. ExPASy Swiss-Prot
Match: LEU3_SYNJB (3-isopropylmalate dehydrogenase OS=Synechococcus sp. GN=leuB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.508e-11 Identity = 65/258 (25.19%), Postives = 115/258 (44.57%), Query Frame = 1 Query: 178 KCTLIPGDGVGPELVYSVQEVFKAANIPVDF-----ESFFFSEVNPTLSAPLEDVVNSIARNKICIKGILATPDFSHTG-----ELQTLNMKLRNALDLYANVVHVKSLPNVKSRHN-------DVDCIIIREQTEGEYSA------LEHEGVPGVVECLKIITAAKSERIAKFAFDYAVKMGRKKVTAVHKANIMKLGDGLFLRSCEEMAKLYPRITFEKMILDNCTLQMVSNPNPFDVRVTPNPYRHIVDNLASGL 882 + T + GDG+GPE++ + V A + F E PL +A+ + + A DF + + + LR L L+AN+ VK P + + +D +++RE T G Y + +G V + + + A+ +RIA+ AF+ A K R+K+ +V KAN++++ L+ +A YP + + +DN +Q+V P FDV +T N + I+ + A+ L Sbjct: 12 RITALAGDGIGPEIMRVGRAVLDAVARQMGFALQWQEGLIGGAAYDQTGDPLPAETLKMAQESDAVY-LAAVGDFKYDALPPEKRPERALLGLRAGLGLFANLRPVKVFPQLVGASSLKPEVIAGIDLVVVRELTGGIYFGQPKGIFTDAQGSRRGVNTM-VYSEAEVDRIARVAFELARKR-RRKLCSVDKANVLEVSQ-LWRERVNAIAAEYPEVELSHLYIDNAAMQLVRWPKQFDVILTGNLFGDILSDEAAML 265
BLAST of DY304404 vs. ExPASy Swiss-Prot
Match: LEU3_SALRD (3-isopropylmalate dehydrogenase OS=Salinibacter ruber (strain DSM 13855) GN=leuB PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 9.508e-11 Identity = 65/247 (26.32%), Postives = 109/247 (44.13%), Query Frame = 1 Query: 190 IPGDGVGPELVYSVQEVFKAANIPVDF-----ESFFFSEVNPTLSAPLEDVV-NSIARNKICIKGILATPDFS-HTGELQTLN--MKLRNALDLYANVVHVK-------SLPNVKSRHNDVDCIIIREQTEGEYSALEHEGVPGVVECLKIITAAKSERIAKFAFDYAVKMGRKKVTAVHKANIMKLGDGLFLRSCEEMAKLYPRITFEKMILDNCTLQMVSNPNPFDVRVTPNPYRHIVDNLASGL 882 +PGDG+GPE+ V +A F E PL D ++ + + G + P ++ +TG+ + + + LR AL +YAN+ V+ + P R D + +RE T G Y + + ERIA AF A + VT+V KAN++++ + L+ E+ P +T + +DN +Q+V +P FDV +T N + I+ +LA+ L Sbjct: 12 LPGDGIGPEVTREALRVLEAVGSAHGFSVTATEHRMGGVALDETGMPLPDSTRDACLESDAVLLGAVGGPKWADNTGDQRPESGLLALRKALGVYANLRPVRVPAALADASPLRPDRVGGTDILFVRELTGGIYFGTPEGRTDDGARSTMAYSDDEIERIAHVAFQRARRRDGN-VTSVDKANVLEVSE-LWREVVTEVHDDCPDVTLRHLYVDNAAMQVVRDPRQFDVVLTGNLFGDILSDLAAAL 256 The following BLAST results are available for this feature:
BLAST of DY304404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 210
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304404 ID=DY304404; Name=DY304404; organism=Citrus clementina; type=EST; length=1292bpback to top |