DY304445
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304445 vs. ExPASy Swiss-Prot
Match: RL3_SULSO (50S ribosomal protein L3P OS=Sulfolobus solfataricus GN=rpl3p PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.251e-31 Identity = 106/337 (31.45%), Postives = 161/337 (47.77%), Query Frame = 1 Query: 19 MSHRKFRAPRRGSLAFSPRKRASRLRGKIRSFPKDDKSQAPHLTAFLGYKAGMTHIVRELNRPDSKLNKKDIVEPVTIVETPAMVVVGVVGYIETPRGLRSLST-VWSNFLGEEL---RRKYYKRWYXXXXXXXXXXXXXVSEKPEAVEKELARIGKYADVIRVIAHTQAKKV-GFQKKA-DVIEIQVNGGDNAAKIAFARGLFEKHVNVKDVFAESEQIDLVGVTKGYGFEGVTARWGTRRLPTKTHKGLRIRACIXXWXP-XRVSGAVP*AGPRGFPTRTVLNRTTTPLASALTRKTPPPDFNLTTNKDHTFGEASATSGMVKNQYVQPDGFPLG 1008 M HRK +PRRGS PRKR+S L R++P+ + SQ P L F+GYK GMTH+ + P+S N K+I PVT++E P ++ + + Y +G ++ T WS+ + L RR + + + K + ++ L RI + R++ TQ +K+ KKA D++EIQ+ GG+ +++ +A + K + ++DVF E + ID+VGVTKG GF GV R+ LP + HK + I P P G GF RT N+ + P F G+V+N YV +G LG Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQIN-SQNPKLLGFVGYKVGMTHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAIDGKGEPNVITEYWSSSSLQFLDITRRIHSISSFLKDDESKKKFDERFNTKLDLIKSNLDRIVYF----RLLVSTQPRKIPSLGKKAPDLVEIQIGGGEKKSQLDYALNILGKEITIRDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELP-RWHKHRKGSRKIGTRGPSLGTPSYTPQPGQLGFHRRTEYNKRIIKIGDEPKEINPAGGF--------------VRYGIVRNTYVLLEGSILG 317
BLAST of DY304445 vs. ExPASy Swiss-Prot
Match: RL3_METB6 (50S ribosomal protein L3P OS=Methanoregula boonei (strain 6A8) GN=rpl3p PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.634e-31 Identity = 109/350 (31.14%), Postives = 154/350 (44.00%), Query Frame = 1 Query: 31 KFRAPRRGSLAFSPRKRASRLRGKIRSFPKDDKSQAPHLTAFLGYKAGMTHIVRELNRPDSKLNKKDIVEPVTIVETPAMVVVGVVGYIETPRGLRSLSTVWSNFLGEELRRKYYKRWYXXXXXXXXXXXXXVSEKPEAVEKELARIGKYADV--------IRVIAHTQ-AKKVGFQKKA-DVIEIQVNGGDNAAKIAFARGLFEKHVNVKDVFAESEQIDLVGVTKGYGFEGVTARWGTRRLPTKTHKGLRIR--ACIXXWXPXRVSGAVP*AGPRGFPTRTVLNRTTTPLASALTRKTPPPDFNLTTNKDHTFGEASATSGMVKNQYVQPDGFPLGKPTKKTVAPRKA 1044 K PRRGSLAFSPRKRA K +S+P + S AP L F GYK GMTH++ + DS K+I+ PVTI+E P M V + Y + G +L+ +W+ L +L R+ P+ + A+ KY+D I +A+TQ A G KK D++EI+V GGD A + +A GL K + + +V D+ +T G G +G RWG K G + R + W P V VP +G G+ RT N+ + TP F G+++N YV G G P K+ + R A Sbjct: 3 KINRPRRGSLAFSPRKRAQSPIPKYKSWP--EHSGAPALLGFAGYKVGMTHVLMVDDHKDSPTEGKEIMVPVTIIEIPTMKVAALRVYTKDTYGKHALTEIWAEPLDSQLSRRV--------------------TSPKNYDSTAAK-KKYSDALAAGLVAEIYALAYTQPATMSGVPKKVPDLMEIKVAGGDIAKQYEYAFGLLGKEIRLSNVIETGAYADITAITIGKGTQGPVKRWGVTLRKRKHSVGGKERHVGTLGPWNPHHVRWEVPQSGQMGYQQRTEFNKRILKIGENGAEITPAGGF--------------LNYGVIRNAYVVIKGSIPG-PAKRLIRIRPA 314
BLAST of DY304445 vs. ExPASy Swiss-Prot
Match: RL3_SULAC (50S ribosomal protein L3P OS=Sulfolobus acidocaldarius GN=rpl3p PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 3.641e-31 Identity = 104/334 (31.14%), Postives = 156/334 (46.71%), Query Frame = 1 Query: 19 MSHRKFRAPRRGSLAFSPRKRASRLRGKIRSFPKDDKSQAPHLTAFLGYKAGMTHIVRELNRPDSKLNKKDIVEPVTIVETPAMVVVGVVGY-IETPRGLRSLSTVWSNFLGEELRRKYYKRWYXXXXXXXXXXXXXVSEKPEAVEKELARIGKYADVIRVIAHTQAKKVGF--QKKADVIEIQVNGGDNAAKIAFARGLFEKHVNVKDVFAESEQIDLVGVTKGYGFEGVTARWGTRRLPTKTHKGLRIRACIXXWXP-XRVSGAVP*AGPRGFPTRTVLNRTTTPLASALTRKTPPPDFNLTTNKDHTFGEASATSGMVKNQYVQPDGFPLG 1008 M HRK +PRRGS PRKRA + +++P + + P L F+GYKAGMTH+ ++P S K++ PVTIVE+P ++ + + Y I++ L L W+NF EE KY KR + EK + ++K L I +R++ TQ V +K+ +++EIQ+ GG ++ + L K + V+DVF E + D++GVTKG GF+GV R+ P + HK + I P VP G GF RT N+ + + P G+VKN Y+ +G LG Sbjct: 1 MGHRKLSSPRRGSAGLRPRKRADEILPTPKNWPLVNLKE-PKLLGFIGYKAGMTHVYMIDDKPTSPNYGKEVYTPVTIVESPPILGLALRAYHIDSKGELSVLVDYWANF--EEGSLKYLKR----KITSLKVDSSKMKEKLDLIQKNLNNI----TYMRLLVSTQPWLVPSLGKKRPEIVEIQIGGGSIQDQLNYGLSLLGKQIPVRDVFREGQLTDIIGVTKGKGFQGVIKRYSVVEFP-RWHKHRKGSRKIGARGPSISTPSYVPQPGQLGFHRRTEYNKRIIKIGDNVNEINP--------------AGGIVNYGLVKNTYLVIEGSVLG 308
BLAST of DY304445 vs. ExPASy Swiss-Prot
Match: RL3_METBU (50S ribosomal protein L3P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl3p PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 3.641e-31 Identity = 104/341 (30.50%), Postives = 159/341 (46.63%), Query Frame = 1 Query: 31 KFRAPRRGSLAFSPRKRASRLRGKIRSFPKDDKSQAPHLTAFLGYKAGMTHIVRELNRPDSKLNKKDIVEPVTIVETPAMVVVGVVGYIETPRGLRSLSTVWSNFLGEELRRKYYKRWYXXXXXXXXXXXXXVSEKPEAVEKELARIGKYADVIRVIAHT-QAKKVGFQKKA-DVIEIQVNGGDNAAKIAFARGLFEKHVNVKDVFAESEQIDLVGVTKGYGFEGVTARWGTRRLPTKTHK--GLRIRACIXXWXPXRVSGAVP*AGPRGFPTRTVLNRTTTPLASALTRKTPPPDFNLTTNKDHTFGEASATSGMVKNQYVQPDGFPLGKPTKKTVAPRK 1041 K PRRGSLA+SPRKR+ + RS+P+ D P L F GYK GMTH++ + S +I PVTI+ETPA+ V + Y + G +++ W++ L ++L R+ V+ E +E L G+ A+ IR+I +T + G KK DV+E V+G D AK +A+ + V + DVF + +D+ +T G+G +G RWG + K + LR + W P VS VP AG G+ RT N+ ++S + P F G+V+ Y+ G G P+K+ + R+ Sbjct: 3 KGHRPRRGSLAYSPRKRSQSHIPRFRSWPESDAE--PKLQGFAGYKVGMTHVIMIDDVKHSLTEGTEISVPVTIIETPAIRVAAIRAYGKDTYGEIAIAEAWTDVLDKDLSRR-----------LKTAKNPDVNASLEKLE-TLVESGR-ANDIRLITYTLPSTLTGVPKKVPDVMETGVSGSDVKAKFEYAKTVLGTMVEISDVFDNGKIVDVAAITTGHGTQGPVKRWGINLMKNKHSRQGSLRQVGTLGPWTPAHVSWRVPQAGQMGYHQRTDYNKRILKMSSDVDEVNPAGGF--------------VNYGLVRGNYILIKGSVPG-PSKRLIRLRE 313
BLAST of DY304445 vs. ExPASy Swiss-Prot
Match: RL3_THESM (50S ribosomal protein L3P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl3p PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 6.210e-31 Identity = 94/279 (33.69%), Postives = 136/279 (48.75%), Query Frame = 1 Query: 43 PRRGSLAFSPRKRASRLRGKIRSFPKDDKSQAPHLTAFLGYKAGMTHIVRELNRPDSKLNK-KDIVEPVTIVETPAMVVVGVVGYIETPRGLRSLSTV------WSNFLGEELRR-KYYKRWYXXXXXXXXXXXXXVSEKPEAVEKELARIGKYADVIRVIAHTQAKKVGFQKKADVIEIQVNGGDNAAKIAFARGLFEKHVNVKDVFAESEQIDLVGVTKGYGFEGVTARWGTRRLPTKTHKGLRIRACIXXWXPXRVSGAVP*AGPRGFPTRTVLNR 855 PRRGSLA+SPRKRA + +IR +P++ Q + F GYKAGMTH++ + P L K K+I PVTIVE P ++V G+ Y GL + + V N+ + + +YK V ++ ++L + G+ + +R + TQ +KK +V+E V G K + + K + V ++ E E +D+V VTKG G +G RWG + K KG R A I W P RV VP AG GF RT N+ Sbjct: 7 PRRGSLAYSPRKRAKSIVPRIRKWPQE---QEVRMLGFAGYKAGMTHVLMIDDAPG--LTKGKEIFVPVTIVEAPPLMVYGIRAYKRGYFGLETATEVIVPDFKLENYPSKRAKNVTFYKLLERRIKTLPKNYTEEVFQQKLGELEDLVKTGEVVE-LRALVATQPWLARIKKKPEVMEYAVGGTSIEEKFNYIKEKLGKEIRVGEILQEGELLDIVAVTKGKGTQGPVKRWGVKLTSHKDSKGRRKVATIGPWHPARVMWTVPRAGQMGFHHRTEFNK 279
BLAST of DY304445 vs. ExPASy Swiss-Prot
Match: RL3_SULIY (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl3p PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 8.111e-31 Identity = 107/350 (30.57%), Postives = 165/350 (47.14%), Query Frame = 1 Query: 19 MSHRKFRAPRRGSLAFSPRKRASRLRGKIRSFPKDDKSQAPHLTAFLGYKAGMTHIVRELNRPDSKLNKKDIVEPVTIVETPAMVVVGVVGYIETPRGLRSLST-VWS----NFLGEELRRKYYKRWYXXXXXXXXXXXXXVSEKPEAVEKELARIGKYADVIRVIAHTQAKKVGF--QKKADVIEIQVNGGDNAAKIAFARGLFEKHVNVKDVFAESEQIDLVGVTKGYGFEGVTARWGTRRLPTKTHKGLRIRACIXXWXP-XRVSGAVP*AGPRGFPTRTVLNRTTTPLASALTRKTPPPDFNLTTNKDHTFGEASATSGMVKNQYVQPDGFPLGKPTKKTVAPRKA 1044 M HRK +PRRGS PRKR+S L R++P+ + S P L F+GYK GM+H+ + P+S N K+I PVT++E P ++ + + Y +G ++ T WS FL + RR + + K + ++ L RI + R++ TQ +K+ +K D++EIQ+ GG+ A++ +A + K +++KDVF E + ID+VGVTKG GF GV R+ LP + HK + I P P G GF RT N+ + P F G+V+N Y+ +G LG K+ + R+A Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQIN-SPNPKLLGFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFL-DITRRIHSLSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYF----RLLVATQPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELP-RWHKHRKGSRKIGTRGPSLGTPSYTPQPGQLGFHRRTEYNKRIIKIGDDPKEINPAGGF--------------VRYGIVRNTYILLEGSILGS-KKRPIFLREA 328
BLAST of DY304445 vs. ExPASy Swiss-Prot
Match: RL3_SULIN (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl3p PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 8.111e-31 Identity = 107/350 (30.57%), Postives = 165/350 (47.14%), Query Frame = 1 Query: 19 MSHRKFRAPRRGSLAFSPRKRASRLRGKIRSFPKDDKSQAPHLTAFLGYKAGMTHIVRELNRPDSKLNKKDIVEPVTIVETPAMVVVGVVGYIETPRGLRSLST-VWS----NFLGEELRRKYYKRWYXXXXXXXXXXXXXVSEKPEAVEKELARIGKYADVIRVIAHTQAKKVGF--QKKADVIEIQVNGGDNAAKIAFARGLFEKHVNVKDVFAESEQIDLVGVTKGYGFEGVTARWGTRRLPTKTHKGLRIRACIXXWXP-XRVSGAVP*AGPRGFPTRTVLNRTTTPLASALTRKTPPPDFNLTTNKDHTFGEASATSGMVKNQYVQPDGFPLGKPTKKTVAPRKA 1044 M HRK +PRRGS PRKR+S L R++P+ + S P L F+GYK GM+H+ + P+S N K+I PVT++E P ++ + + Y +G ++ T WS FL + RR + + K + ++ L RI + R++ TQ +K+ +K D++EIQ+ GG+ A++ +A + K +++KDVF E + ID+VGVTKG GF GV R+ LP + HK + I P P G GF RT N+ + P F G+V+N Y+ +G LG K+ + R+A Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQIN-SPNPKLLGFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFL-DITRRIHSLSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYF----RLLVATQPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELP-RWHKHRKGSRKIGTRGPSLGTPSYTPQPGQLGFHRRTEYNKRIIKIGDDPKEINPAGGF--------------VRYGIVRNTYILLEGSILGS-KKRPIFLREA 328
BLAST of DY304445 vs. ExPASy Swiss-Prot
Match: RL3_SULIL (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl3p PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 8.111e-31 Identity = 107/350 (30.57%), Postives = 165/350 (47.14%), Query Frame = 1 Query: 19 MSHRKFRAPRRGSLAFSPRKRASRLRGKIRSFPKDDKSQAPHLTAFLGYKAGMTHIVRELNRPDSKLNKKDIVEPVTIVETPAMVVVGVVGYIETPRGLRSLST-VWS----NFLGEELRRKYYKRWYXXXXXXXXXXXXXVSEKPEAVEKELARIGKYADVIRVIAHTQAKKVGF--QKKADVIEIQVNGGDNAAKIAFARGLFEKHVNVKDVFAESEQIDLVGVTKGYGFEGVTARWGTRRLPTKTHKGLRIRACIXXWXP-XRVSGAVP*AGPRGFPTRTVLNRTTTPLASALTRKTPPPDFNLTTNKDHTFGEASATSGMVKNQYVQPDGFPLGKPTKKTVAPRKA 1044 M HRK +PRRGS PRKR+S L R++P+ + S P L F+GYK GM+H+ + P+S N K+I PVT++E P ++ + + Y +G ++ T WS FL + RR + + K + ++ L RI + R++ TQ +K+ +K D++EIQ+ GG+ A++ +A + K +++KDVF E + ID+VGVTKG GF GV R+ LP + HK + I P P G GF RT N+ + P F G+V+N Y+ +G LG K+ + R+A Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQIN-SPNPKLLGFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFL-DITRRIHSLSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYF----RLLVATQPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELP-RWHKHRKGSRKIGTRGPSLGTPSYTPQPGQLGFHRRTEYNKRIIKIGDDPKEINPAGGF--------------VRYGIVRNTYILLEGSILGS-KKRPIFLREA 328
BLAST of DY304445 vs. ExPASy Swiss-Prot
Match: RL3_SULIM (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl3p PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.059e-30 Identity = 107/350 (30.57%), Postives = 165/350 (47.14%), Query Frame = 1 Query: 19 MSHRKFRAPRRGSLAFSPRKRASRLRGKIRSFPKDDKSQAPHLTAFLGYKAGMTHIVRELNRPDSKLNKKDIVEPVTIVETPAMVVVGVVGYIETPRGLRSLST-VWS----NFLGEELRRKYYKRWYXXXXXXXXXXXXXVSEKPEAVEKELARIGKYADVIRVIAHTQAKKVGF--QKKADVIEIQVNGGDNAAKIAFARGLFEKHVNVKDVFAESEQIDLVGVTKGYGFEGVTARWGTRRLPTKTHKGLRIRACIXXWXP-XRVSGAVP*AGPRGFPTRTVLNRTTTPLASALTRKTPPPDFNLTTNKDHTFGEASATSGMVKNQYVQPDGFPLGKPTKKTVAPRKA 1044 M HRK +PRRGS PRKR+S L R++P+ + S P L F+GYK GM+H+ + P+S N K+I PVT++E P ++ + + Y +G ++ T WS FL + RR + + K + ++ L RI + R++ TQ +K+ +K D++EIQ+ GG+ A++ +A + K +++KDVF E + ID+VGVTKG GF GV R+ LP + HK + I P P G GF RT N+ + P F G+V+N Y+ +G LG K+ + R+A Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQIN-SPNPKLLGFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFL-DITRRIHSFSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYF----RLLVATQPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELP-RWHKHRKGSRKIGTRGPSLGTPSYTPQPGQLGFHRRTEYNKRIIKIGDDPKEINPAGGF--------------VRYGIVRNTYILLEGSILGS-KKRPIFLREA 328
BLAST of DY304445 vs. ExPASy Swiss-Prot
Match: RL3_SULIK (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl3p PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.059e-30 Identity = 107/350 (30.57%), Postives = 165/350 (47.14%), Query Frame = 1 Query: 19 MSHRKFRAPRRGSLAFSPRKRASRLRGKIRSFPKDDKSQAPHLTAFLGYKAGMTHIVRELNRPDSKLNKKDIVEPVTIVETPAMVVVGVVGYIETPRGLRSLST-VWS----NFLGEELRRKYYKRWYXXXXXXXXXXXXXVSEKPEAVEKELARIGKYADVIRVIAHTQAKKVGF--QKKADVIEIQVNGGDNAAKIAFARGLFEKHVNVKDVFAESEQIDLVGVTKGYGFEGVTARWGTRRLPTKTHKGLRIRACIXXWXP-XRVSGAVP*AGPRGFPTRTVLNRTTTPLASALTRKTPPPDFNLTTNKDHTFGEASATSGMVKNQYVQPDGFPLGKPTKKTVAPRKA 1044 M HRK +PRRGS PRKR+S L R++P+ + S P L F+GYK GM+H+ + P+S N K+I PVT++E P ++ + + Y +G ++ T WS FL + RR + + K + ++ L RI + R++ TQ +K+ +K D++EIQ+ GG+ A++ +A + K +++KDVF E + ID+VGVTKG GF GV R+ LP + HK + I P P G GF RT N+ + P F G+V+N Y+ +G LG K+ + R+A Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQIN-SPNPKLLGFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFL-DITRRIHSFSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYF----RLLVATQPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELP-RWHKHRKGSRKIGTRGPSLGTPSYTPQPGQLGFHRRTEYNKRIIKIGDDPKEINPAGGF--------------VRYGIVRNTYILLEGSILGS-KKRPIFLREA 328 The following BLAST results are available for this feature:
BLAST of DY304445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY304445 ID=DY304445; Name=DY304445; organism=Citrus clementina; type=EST; length=1272bpback to top |