DY304582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304582 vs. ExPASy Swiss-Prot
Match: CCR4_ASPFU (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Aspergillus fumigatus GN=ccr4 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.524e-11 Identity = 53/156 (33.97%), Postives = 69/156 (44.23%), Query Frame = 3 Query: 264 PLRRKPFDEPSPDVLRHWIDADPNPISSQER---FSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDR------------YFDILNVMEKAGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLR 686 PL P PD R WI D SS R +V+SYN L D +A + Y R + W R+ LI EL + DIIC+QE+D+ Y D V G A + VDGCA F+K KF LL++ I F + +R Sbjct: 295 PLTLMAVHLPPPD--RDWIVLDETASSSNHRTDKVTVLSYNTLCDSSATQSHYGYAPARV--LSWEFRRELILNELRSHDSDIICLQEIDQGSYNEYFREQLAYNDYKGVYWPRGRAMGMQEEDAKCVDGCATFFKGSKFILLDKQLINFGQTAVR 446 HSP 2 Score: 21.1718 bits (43), Expect = 5.524e-11 Identity = 13/47 (27.66%), Postives = 21/47 (44.68%), Query Frame = 2 Query: 731 QKSRRVLVGNIHVL*NPNRGEVKLS*ICFLSSRGQIVAKKWGKIPGC 871 Q R +V N H+ +P +VKL L +++ + K P C Sbjct: 476 QTGARFIVVNAHLYWDPAFKDVKLIQTAILMEELTKLSETYAKWPPC 522
BLAST of DY304582 vs. ExPASy Swiss-Prot
Match: NOCT_XENLA (Nocturnin OS=Xenopus laevis GN=ccrn4l PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.903e-11 Identity = 41/128 (32.03%), Postives = 64/128 (50.00%), Query Frame = 3 Query: 342 SSQER-FSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILN-VMEKAGY---------AGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLREN 692 S Q R F V+ +NIL + +D + E +KW RK LI +E++ PD++C+QEVD YFD ++ + GY + C + DGCA+F+ D+F+L+ I L+ N Sbjct: 94 SQQPRTFRVMQWNILAQALG-EGKDNFIMCPMEALKWEERKYLILEEILMYQPDVLCLQEVDHYFDTFQPILSRLGYQCTFLAKPWSPCLDVEHNNGPDGCALFFLQDRFQLVNSAKIRLSARTLKTN 220
BLAST of DY304582 vs. ExPASy Swiss-Prot
Match: CNO6L_HUMAN (CCR4-NOT transcription complex subunit 6-like OS=Homo sapiens GN=CNOT6L PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 7.709e-11 Identity = 44/138 (31.88%), Postives = 76/138 (55.07%), Query Frame = 3 Query: 309 RHWIDA-DPNPISSQERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVD--RYFDI-LNVMEKAGYAGCYKRRTG---------DNVDGCAMFWKADKFRLLEQTSIEFKEFGL 683 R WI + + I F+V+ YN+L DK A R LY + W RK+ I +E++ + DII +QEV+ +YF + L +++ GY G + ++ +VDGCA+F+K +KF L+++ ++EF + + Sbjct: 172 RPWITLKERDQILPSASFTVMCYNVLCDKYAT--RQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQYFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQVAM 307 The following BLAST results are available for this feature:
BLAST of DY304582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY304582 ID=DY304582; Name=DY304582; organism=Citrus clementina; type=EST; length=923bpback to top |