DY304597

Overview
NameDY304597
Unique NameDY304597
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length964
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304597 vs. ExPASy Swiss-Prot
Match: GUN6_ORYSJ (Endoglucanase 6 OS=Oryza sativa subsp. japonica GN=Os02g0733300 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.910e-48
Identity = 97/203 (47.78%), Postives = 125/203 (61.58%), Query Frame = 2
Query:  143 LSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWRRPEDMTTSRRAYKIDENNPGTDLAGETAAEMDAASIVLQINDGK*FKLFLDEDGPI*VVSNVLRGNEQETLEPVDTNMHKGTC 751
            L KS+L+FE QRSGRLP +QR+ WR  SGL DG    VDL GGYYDAGD VKFG PMAFT T++SWG+I+F          E A +A++W TDY +KA   PN ++ +VGD   DH CW RPEDM T R  YK+D ++PG+D+A ETAA + A SIV +  D    K  LD    +   ++  RG       P  +++H   C
Sbjct:   41 LHKSILFFEGQRSGRLPPDQRLRWRRDSGLHDGAAASVDLTGGYYDAGDNVKFGFPMAFTATLMSWGLIDFGRSFGP--HKEEARKAVRWATDYLMKATAKPNTVYVQVGDAFRDHSCWERPEDMDTPRTVYKVDPSHPGSDVAAETAAALAAGSIVFRDADPAYSKRLLDRAIAVFEFADKYRG-------PYSSSLHDAVC 234          
BLAST of DY304597 vs. ExPASy Swiss-Prot
Match: GUN8_ORYSJ (Endoglucanase 8 OS=Oryza sativa subsp. japonica GN=Os02g0778600 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.106e-47
Identity = 86/159 (54.09%), Postives = 116/159 (72.96%), Query Frame = 2
Query:  143 LSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWRRPEDMTTSRRAYKIDENNPGTDLAGETAAEMDAASIVLQ 619
            L+KS+++ EAQRSG+LP   R+ WR  SG+ DG    VDL GGYYDAGD VK+GLP+AFTVT L+W  + F +++ AA ELE+   AI+WGTDYF+KA T  + LW +VGD + DH CW RPE+M T R  Y+I++  PG+++A ETAA M A+S+V +
Sbjct:   47 LTKSIMFLEAQRSGKLPPTNRIKWRGDSGMEDGKLANVDLTGGYYDAGDNVKYGLPLAFTVTTLAWTAMAFEKELKAARELENVHAAIRWGTDYFLKAATKKDHLWVQVGDPNADHQCWVRPENMPTPRTLYQINDKTPGSEIAAETAAAMTASSMVFR 205          
BLAST of DY304597 vs. ExPASy Swiss-Prot
Match: GUN4_THEFU (Endoglucanase E-4 OS=Thermomonospora fusca GN=celD PE=1 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 1.886e-47
Identity = 89/162 (54.94%), Postives = 115/162 (70.99%), Query Frame = 2
Query:  143 LSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWRRPEDMTTSRRAYKIDENNPGTDLAGETAAEMDAASIVLQIND 628
            L KS+ ++EAQRSG+LP N RV+WR  SGL DG + G+DL GG+YDAGD VKFG PMAFT TML+WG IE  E    +G++ +  + ++W  DYFIKAH SPNVL+ +VGDGD DH  W   E M   R ++K+D + PG+D+A ETAA M A+SIV   +D
Sbjct:   56 LQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDD 217          
BLAST of DY304597 vs. ExPASy Swiss-Prot
Match: GUNA_BACPU (Endoglucanase A OS=Bacillus pumilus GN=eglA PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 5.488e-47
Identity = 88/162 (54.32%), Postives = 114/162 (70.37%), Query Frame = 2
Query:  143 LSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWRRPEDMTTSRRAYKIDENNPGTDLAGETAAEMDAASIVLQIND 628
            L KS+L++EAQRSGRLP + R+ WR  SGL DG + G DL GG+YDAGD VKFGLPMA++  +L+W V E+RE    A  L+   + IKW TDYF+KAHT PN  WA+VGDG+ DH  W   E M  +R A+KIDE+ PGT++A +TAA + A SI+ +  D
Sbjct:   53 LQKSMLFYEAQRSGRLPESNRLNWRGDSGLKDGKDVGHDLTGGWYDAGDHVKFGLPMAYSAAVLAWTVYEYREAYEEAELLDEILDQIKWATDYFLKAHTGPNEFWAQVGDGNADHAWWGPAEVMPMNRPAFKIDEHCPGTEVAAQTAAALAAGSIIFKETD 214          
BLAST of DY304597 vs. ExPASy Swiss-Prot
Match: GUN23_ORYSJ (Endoglucanase 23 OS=Oryza sativa subsp. japonica GN=GLU12 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 9.361e-47
Identity = 91/163 (55.83%), Postives = 115/163 (70.55%), Query Frame = 2
Query:  143 LSKSLLYFEAQRSGRLPY-NQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWRRPEDMTTSRRAYKIDENNPGTDLAGETAAEMDAASIVLQIND 628
            L+KS+L+FE QRSGRLP   QR  WR  S ++DG   GVDL GGYYDAGD VKFG PMAFT TML+WGV+EF + +  A E  HA +A++W TDY +K  + P V++ +VGD   DH CW RPEDM T+R  Y I    PG+D+AGETAA + AAS+V + +D
Sbjct:   46 LAKSILFFEGQRSGRLPAAGQRAAWRGDSAVSDGGAAGVDLEGGYYDAGDNVKFGFPMAFTATMLAWGVVEFGDAMPPA-ERAHAADAVRWATDYLLKTISHPGVIFIQVGDPTKDHGCWERPEDMDTARTVYNISAARPGSDVAGETAAALAAASMVFRDDD 207          
BLAST of DY304597 vs. ExPASy Swiss-Prot
Match: GUN4_BACS5 (Endoglucanase 4 OS=Bacillus sp. (strain KSM-522) PE=3 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 2.085e-46
Identity = 87/162 (53.70%), Postives = 114/162 (70.37%), Query Frame = 2
Query:  143 LSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWRRPEDMTTSRRAYKIDENNPGTDLAGETAAEMDAASIVLQIND 628
            L KS+L++EAQRSG+LP + R+ WR  SGL DG + G DL GG+YDAGD VKFGLPMA++  +L+W V E+RE    A  L+   + IKW TDYF+KAHT PN  WA+VGDG+ DH  W   E M  +R A+KIDE+ PGT++A +TAA + A SI+ +  D
Sbjct:   34 LQKSILFYEAQRSGKLPESNRLNWRGDSGLEDGKDVGHDLTGGWYDAGDHVKFGLPMAYSAAVLAWTVYEYREAYEEAELLDDMLDQIKWATDYFLKAHTGPNEFWAQVGDGNADHGWWGPAEVMPMNRPAFKIDEHCPGTEVAAQTAAALAAGSIIFKETD 195          
BLAST of DY304597 vs. ExPASy Swiss-Prot
Match: GUN16_ARATH (Endoglucanase 16 OS=Arabidopsis thaliana GN=At3g43860 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 2.085e-46
Identity = 89/164 (54.27%), Postives = 114/164 (69.51%), Query Frame = 2
Query:  143 LSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWRRPEDMTTSRRAYKIDENNPGTDLAGETAAEMDAASIVLQINDGK 634
            L+KSL++ EAQRSG+LP N RV WR  S L DG    VDL GGYYDAGD VK+GLPMAFT+T L+W  I + +++ A GELE+A  AI+WGTDYF+K  +  N L+ +VGD + DH CW RPE+M T R   +I +  PGT++A E AA   A+SIV +  D K
Sbjct:   39 LTKSLIFLEAQRSGKLPPNNRVPWRGDSALDDGKLVNVDLSGGYYDAGDNVKYGLPMAFTITTLAWSTITYEKELRATGELENARAAIRWGTDYFLKCASRKNRLYVQVGDPNADHQCWARPENMKTPRTVLEISDKVPGTEIAAEAAAAFAASSIVFRHVDHK 202          
BLAST of DY304597 vs. ExPASy Swiss-Prot
Match: GUN19_ORYSJ (Endoglucanase 19 OS=Oryza sativa subsp. japonica GN=Os08g0114200 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.646e-46
Identity = 88/163 (53.99%), Postives = 118/163 (72.39%), Query Frame = 2
Query:  143 LSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWGTDYFIKAHT-SPNVLWAEVGDGDTDHYCWRRPEDMTTSRRAYKIDENNPGTDLAGETAAEMDAASIVLQIND 628
            L+KS+++FE QRSG+LP   R+ WR  SGLTDG +  VDLVGGYYDAGD VKFGLPMAF+ TML+W V++F + + A  EL +A  A++WG DY +KA T +P  L+ +V D + DH CW RPEDM T R  Y++  + PG+D+AGETAA + A+S+V +  D
Sbjct:   59 LAKSIIFFEGQRSGKLPPGNRMPWRADSGLTDGAQYNVDLVGGYYDAGDNVKFGLPMAFSTTMLAWSVLDFGKFMGA--ELPNARAAVRWGADYLLKAATATPGALYVQVADPNQDHRCWERPEDMDTPRSVYRVTADKPGSDVAGETAAALAASSMVFRRAD 219          
BLAST of DY304597 vs. ExPASy Swiss-Prot
Match: GUN11_ORYSJ (Endoglucanase 11 OS=Oryza sativa subsp. japonica GN=GLU4 PE=2 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 1.035e-45
Identity = 88/163 (53.99%), Postives = 114/163 (69.94%), Query Frame = 2
Query:  143 LSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWGTDYFIKAHT-SPNVLWAEVGDGDTDHYCWRRPEDMTTSRRAYKIDENNPGTDLAGETAAEMDAASIVLQIND 628
            L+KS+L+F+ QRSGRLP +Q V WR +SGL+DG    VDL GGYYD GD VKFG PMAFT TMLSWGV+E+  ++     L  A +A++W  DY ++A T +P VL+  VGD D DH CW RPEDM T R  Y +  ++PG+D+A ETAA + AAS+ L+  D
Sbjct:   46 LAKSILFFQGQRSGRLPPDQAVKWRSNSGLSDGSAANVDLTGGYYDGGDNVKFGFPMAFTTTMLSWGVVEYGGRMRGR-VLRDARDAVRWAADYLLRAATATPGVLYVGVGDPDADHRCWERPEDMDTPRAVYSVSASSPGSDVAAETAAALAAASLALRAAD 207          
BLAST of DY304597 vs. ExPASy Swiss-Prot
Match: GUN9_ARATH (Endoglucanase 9 OS=Arabidopsis thaliana GN=CEL3 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.765e-45
Identity = 92/171 (53.80%), Postives = 117/171 (68.42%), Query Frame = 2
Query:  143 LSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWGTDYFIK-AHTSPNVLWAEVGDGDTDHYCWRRPEDMTTSRRAYKIDENNPGTDLAGETAAEMDAASIVLQINDGK*FKLFL 652
            LSKSLL+F+ QRSG LP  Q+++WR  SGL+DG    VDL GGYYDAGD VKF LPMAFT TMLSW  +E+ +++    ELE+A   I+W TDY +K A  +P  L+  VGD + DH CW RPEDM T R  Y +  +NPG+D+A ETAA + AAS+V +  D K  +L L
Sbjct:   29 LSKSLLFFQGQRSGPLPRGQQISWRASSGLSDGSAAHVDLTGGYYDAGDNVKFNLPMAFTTTMLSWSALEYGKRMGP--ELENARVNIRWATDYLLKCARATPGKLYVGVGDPNVDHKCWERPEDMDTPRTVYSVSASNPGSDVAAETAAALAAASMVFRKVDSKYSRLLL 197          
The following BLAST results are available for this feature:
BLAST of DY304597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
GUN6_ORYSJ2.910e-4847.78Endoglucanase 6 OS=Oryza sativa subsp. japonica GN... [more]
GUN8_ORYSJ1.106e-4754.09Endoglucanase 8 OS=Oryza sativa subsp. japonica GN... [more]
GUN4_THEFU1.886e-4754.94Endoglucanase E-4 OS=Thermomonospora fusca GN=celD... [more]
GUNA_BACPU5.488e-4754.32Endoglucanase A OS=Bacillus pumilus GN=eglA PE=1 S... [more]
GUN23_ORYSJ9.361e-4755.83Endoglucanase 23 OS=Oryza sativa subsp. japonica G... [more]
GUN4_BACS52.085e-4653.70Endoglucanase 4 OS=Bacillus sp. (strain KSM-522) P... [more]
GUN16_ARATH2.085e-4654.27Endoglucanase 16 OS=Arabidopsis thaliana GN=At3g43... [more]
GUN19_ORYSJ4.646e-4653.99Endoglucanase 19 OS=Oryza sativa subsp. japonica G... [more]
GUN11_ORYSJ1.035e-4553.99Endoglucanase 11 OS=Oryza sativa subsp. japonica G... [more]
GUN9_ARATH1.765e-4553.80Endoglucanase 9 OS=Arabidopsis thaliana GN=CEL3 PE... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ9YC13RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304597 ID=DY304597; Name=DY304597; organism=Citrus clementina; type=EST; length=964bp
ACCCTTAATTAAAAATAATAAGAACCCAAGATTTGCTTTTGTAAAACTTC
AGCAGCAGCAGCATTGCTTACTAATCTTAATAAGCATTTTCATTAATGTC
TCCGCTGCTGCAACGGCAACGGCTTTCGATTATGCTGACGCCTTGTCAAA
GAGCCTCCTTTACTTCGAAGCTCAACGTTCAGGCCGCTTGCCGTACAACC
AACGTGTCACGTGGCGGGACCATTCCGGCCTCACCGACGGCTTGGAGCAA
GGGGTTGATTTGGTCGGAGGGTATTATGATGCTGGTGACCAGGTGAAATT
TGGCCTGCCAATGGCTTTCACAGTGACTATGCTTTCATGGGGTGTCATCG
AATTTCGTGAACAGATCGCTGCTGCCGGTGAACTAGAGCATGCTTTCGAG
GCGATCAAATGGGGCACTGATTACTTCATTAAGGCACACACTAGCCCAAA
TGTGCTATGGGCTGAGGTGGGTGATGGGGATACTGACCACTACTGCTGGC
GACGCCCGGAGGATATGACCACATCAAGACGTGCTTACAAGATTGATGAG
AACAATCCCGGGACAGATCTCGCCGGAGAGACTGCTGCGGAGATGGACGC
TGCGTCGATTGTGTTACAAATAAACGACGGAAAATAGTTCAAACTATTCC
TGGACGAAGATGGACCTATATAAGTTGTTAGTAACGTATTGAGAGGGAAT
GAACAAGAAACACTGGAACCCGTTGATACGAATATGCATAAGGGAACGTG
TAAAAGGATTGAATAATTACCAAGGGACGATTTGAACTTCCCCAAACCCC
GAAAGGCCTGAAATTGGTTGTCTCCCGGGAACACACTGGATGTTCAAAGA
AATTATGGATAAGAATTTAAAAGTTCAACAACCAAATTCGGCCACAAAAA
TAGATCCATTCAAGAAACAAGTGATTTGTTTGGACCGTGAGCAAATCCTG
AAAAAGTACAAAAG
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