DY304602
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304602 vs. ExPASy Swiss-Prot
Match: ATPG_RHORU (ATP synthase gamma chain OS=Rhodospirillum rubrum GN=atpG PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.350e-17 Identity = 76/250 (30.40%), Postives = 124/250 (49.60%), Query Frame = 2 Query: 242 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDA-------------KKNV--IVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYT---QVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLS---PELV----EREAESGGKLVELDSYEIEGGETKGEIL*NLADFQFPCVMFNGVLE 916 S + +R+R+ SVK+ QKIT AMKMVAAS+LR Q AE +R Q +LG+ A K NV IV +++++GLCGG N + ++ +++L + K K + +G+K + L R+ K I I + + ++ + S L D+ + EFD ++Y++F S +S + T ++ P V + + +G K + YE E E EIL +L +F G+LE Sbjct: 3 SLKDLRSRITSVKSTQKITSAMKMVAASRLRRAQDTAEAARPYTQRMERMLGNLAASTAGMAGASPLLGGTGKDNVHLIVALTANRGLCGGFNGSIIRATRTLVRELEAQGKTVKLLCIGKKGRDGLKREFPKQIIGGIADQSSKAIGFSDADRFSRLILDMFQAGEFDVCTLVYNRFQSAISQVVTRQQIIPFAVPTTVAAGNDNDRTAGPKAI----YEYEPSEE--EILADLLPKNVAIQVFRGMLE 246
BLAST of DY304602 vs. ExPASy Swiss-Prot
Match: ATPG_RHORT (ATP synthase gamma chain OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=atpG PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.350e-17 Identity = 76/250 (30.40%), Postives = 124/250 (49.60%), Query Frame = 2 Query: 242 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDA-------------KKNV--IVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYT---QVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLS---PELV----EREAESGGKLVELDSYEIEGGETKGEIL*NLADFQFPCVMFNGVLE 916 S + +R+R+ SVK+ QKIT AMKMVAAS+LR Q AE +R Q +LG+ A K NV IV +++++GLCGG N + ++ +++L + K K + +G+K + L R+ K I I + + ++ + S L D+ + EFD ++Y++F S +S + T ++ P V + + +G K + YE E E EIL +L +F G+LE Sbjct: 3 SLKDLRSRITSVKSTQKITSAMKMVAASRLRRAQDTAEAARPYTQRMERMLGNLAASTAGMAGASPLLGGTGKDNVHLIVALTANRGLCGGFNGSIIRATRTLVRELEAQGKTVKLLCIGKKGRDGLKREFPKQIIGGIADQSSKAIGFSDADRFSRLILDMFQAGEFDVCTLVYNRFQSAISQVVTRQQIIPFAVPTTVAAGNDNDRTAGPKAI----YEYEPSEE--EILADLLPKNVAIQVFRGMLE 246
BLAST of DY304602 vs. ExPASy Swiss-Prot
Match: ATPG_ACICJ (ATP synthase gamma chain OS=Acidiphilium cryptum (strain JF-5) GN=atpG PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.715e-17 Identity = 64/243 (26.34%), Postives = 120/243 (49.38%), Query Frame = 2 Query: 242 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG-------DTPTVDA--------KKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDIL---KNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLVELDSYEIEGGETKGEIL*NLADFQFPCVMFNGVLE 916 S + +RNR+ SVK+ QKITKAMKMVAA+KLR Q +AE +R A++G + P A + ++IV +S+D+GL G N++ + +++ + K+ + +G K + RD ++ I + K + + +A+ I+ + +FD +++++F SV+S +P+ ++ + ++ G YEIE + G +L L +++ +LE Sbjct: 3 SLKALRNRIASVKSTQKITKAMKMVAAAKLRRAQAQAEAARPYATRMAAMMGALAEGAAENPNAPALLVGNGADRTHLIVVVSADRGLAGPFNASINRAARARARKLEAEGKQVRLFTVGRKGRDFFRRDMREKIIGEANFVGKKTIEFADAEAIANQIIAAFNDGKFDVCTLMFNRFVSVMSQVPSETPLIPASAGQAANDNAGSDQPAGDYEIEPDD--GTLLDRLLPRNLAVQIYSALLE 243
BLAST of DY304602 vs. ExPASy Swiss-Prot
Match: ATPG_AZOC5 (ATP synthase gamma chain OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=atpG PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.464e-17 Identity = 68/225 (30.22%), Postives = 108/225 (48.00%), Query Frame = 2 Query: 242 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG----------DTP-----TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLVELDSYEIEGGETKGEIL 862 S + +RNR+ SVK QKITKAM+MVAA+KLR Q+ AE +R + ++LG DTP T +K++++ +S++GLCG N+ V+ + L G K+ K+ +G K L R I ++ L + +A+ I+ EFD + +S F SV+S +PT ++ + E S + YE E E ++L Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQMAAEAARPYAERMDSVLGNIASGVTLSADTPLLLSGTGKDEKHLLLVCTSERGLCGAFNTNIVRAVRERANLLIGQGKDVKFFCVGRKGYDQLRRLYPGQIVELVDLRSVRNLGFVNAHDIAEKIIDRFNKGEFDVCTLFFSHFKSVISQVPTAQQIIPATFEKAEGPSA-----VYDYEPEESEILADLL 222
BLAST of DY304602 vs. ExPASy Swiss-Prot
Match: ATPG_BRUC2 (ATP synthase gamma chain OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=atpG PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.273e-16 Identity = 68/201 (33.83%), Postives = 101/201 (50.25%), Query Frame = 2 Query: 242 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG---------DTPTV---DAKKNV--IVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAE 793 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AE +R Q A+L D P + K NV +V ++++GLCGG NS ++++ + K K + +G+K IL R+ + + + L + + I+K E FD + YS+F SV+S +PT A L P + EAE Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAQNVSGEDAPALMVGTGKDNVHLLVVCTAERGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVPT-AQQLIPASADNEAE 202
BLAST of DY304602 vs. ExPASy Swiss-Prot
Match: ATPG_RHIME (ATP synthase gamma chain OS=Rhizobium meliloti GN=atpG PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.663e-16 Identity = 66/225 (29.33%), Postives = 108/225 (48.00%), Query Frame = 2 Query: 242 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDI--ELIITELQKNPL-NYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLVELDSYEIEGGETKGEIL 862 S + ++NR+ SVK QKITKAMKMVAA+KLR Q AE +R Q A+L + T T ++++ ++++GLCGG NS + ++ + K K + +G+K +L RD I + + E++K N ++ ++ EFD + YS+F SV+S +PT ++ E A G + YE E G +++ Sbjct: 3 SLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMAAVLANIAQAVGADDSAPRLMTGTGRDDTHLVIVCTAERGLCGGFNSQIARFARDHVRKLLAQGKTVKIICVGKKGFDMLRRDFASLIIDRVDLREVKKIGFENADRIGHKVIELFDKGEFDVCTLFYSEFKSVISQIPTAQQLIPASAGEVAAAEGEGASAIYEYEPEAGAILSDLI 227
BLAST of DY304602 vs. ExPASy Swiss-Prot
Match: ATPG_DROME (ATP synthase subunit gamma, mitochondrial OS=Drosophila melanogaster GN=ATPsyn-gamma PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.663e-16 Identity = 65/232 (28.02%), Postives = 124/232 (53.45%), Query Frame = 2 Query: 248 QIVRNRMKSVKNIQKITKAMKMVAASKLRAIQ--VKAENSRGLW-QPFTALLGDTPTVDAK-KNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKEN-KYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILK-NVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLVELDSYEIEGGETKGEIL*NLADFQFPCVMFNGVLEKGC 925 +++ R+KSVKNIQKIT++MKMV+A+K + +KA G+ Q F P A+ K +++ ++SD+GLCG +++ ++ + D+ N K +G+K++AIL R K+I ++ E+ + P + S +A+++L+ ++ +I+Y++F SVVS+ + + S VE+ KL DS + +++ + +F ++F + E C Sbjct: 30 KMISIRLKSVKNIQKITQSMKMVSAAKYARAERDLKAARPYGIGAQQFFEKTEIQPDEKAEPKKLLIAVTSDRGLCGAVHTGVARLIRG----ELAQDEANTKVFCVGDKSRAILSRLYGKNILMVANEVGRLPPTFLDASKIANEVLQTGYDYTEGKIVYNRFKSVVSYQCSTLPIFSGSTVEKSE----KLAVYDSLD-------SDVVKSYLEFSLASLIFYTMKEGAC 246
BLAST of DY304602 vs. ExPASy Swiss-Prot
Match: ATPG_SCHPO (ATP synthase subunit gamma, mitochondrial OS=Schizosaccharomyces pombe GN=atp3 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.836e-16 Identity = 64/228 (28.07%), Postives = 112/228 (49.12%), Query Frame = 2 Query: 254 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD--TPTVDAKKNVIVTISSDKGLCGGINSTAVK-ISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV-EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLVELDSYEIEGGETKGEIL*NLADFQFPCVMFNGVLEKGC 925 + R+KS+KNI+KITK +K VA +KL Q E S ++ + + T + K ++V SSDKGLCGGI+S+ + I + LH + + ILGEK + L+R + L + ++ + ++ +IL++ ++D + ++Y+KF S VSF M + + + + L +YE+ E+ L +F F +F+ + E C Sbjct: 37 IEQRLKSIKNIEKITKTIKTVAQTKLTRAQRAMEASNKYYRVSDEVFKEAGTKAPEEGKTLMVACSSDKGLCGGIHSSISRLIRRELH--DPKTFENTSLCILGEKVRTQLLRFCPESFYLTFAHIGGASPSFEEALQISSNILEHAKDYDRIVLVYNKFASAVSFETVMKNLYTTKAINESP-------NLSAYEV-----SDEVHQPLMEFAFANAIFSAMAEAHC 250
BLAST of DY304602 vs. ExPASy Swiss-Prot
Match: ATPG_MAGSA (ATP synthase gamma chain OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=atpG PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.836e-16 Identity = 77/252 (30.56%), Postives = 124/252 (49.21%), Query Frame = 2 Query: 242 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDI---LKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREA--ESGGKLVELDSYEIEGGETK--GEIL-*NLADFQFPCVMFNGVLEKGCR 928 S + +R ++ SVK+ +KIT AMKMVAASKLR Q AE +R + +LG + T K +++V +++D+GLCGG NS+ V+ +K++ K K + +G KA+ L RD + + L + + + + +A I EFD ++Y+KF S ++ T V+ + E+ A E+G K + YE E E + EIL NLA F ++ + E+G R Sbjct: 3 SLKDLRMKIVSVKSTRKITSAMKMVAASKLRRAQTAAEAARPFAERMERMLGTLAASLAGQSGAPRMISGTGFDKVHLLVAVTADRGLCGGFNSSIVRATKAMAADLLKQGKTIKIMPVGRKAREQLRRDYGQYMIEGFENLGRKGIVFAEADQVASQISAMFDAEEFDVCTVVYNKFKSAIAQEVTRQQVIPFPVPEQAAKSETGPKAI----YEFEPSEEEILAEILPRNLATQMFRALLESQASEQGAR 250
BLAST of DY304602 vs. ExPASy Swiss-Prot
Match: ATPG_SINMW (ATP synthase gamma chain OS=Sinorhizobium medicae (strain WSM419) GN=atpG PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.704e-16 Identity = 65/211 (30.81%), Postives = 104/211 (49.29%), Query Frame = 2 Query: 242 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDI--ELIITELQKNPL-NYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLVELD 820 S + ++NR+ SVK QKITKAMKMVAA+KLR Q AE +R Q A+L + T T +++V ++++GLCGG NS + ++ + K K + +G+K IL R+ I + + E++K N ++ ++ N EFD + YS+F SV+S +PT ++ E AE + E + Sbjct: 3 SLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMAAVLSNIAQAVGADDSAPRLMTGTGKDDTHLLVVCTAERGLCGGFNSQIARHARDHVRKLLAQGKTVKIICVGKKGFDILRREFASLIIDRVDLREVKKIGFENADRIGHKVIELFDNGEFDVCTLFYSEFKSVISQIPTAQQLIPASAGEAVAEGASAIYEYE 213 The following BLAST results are available for this feature:
BLAST of DY304602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304602 ID=DY304602; Name=DY304602; organism=Citrus clementina; type=EST; length=944bpback to top |