DY304668

Overview
NameDY304668
Unique NameDY304668
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length984
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304668 vs. ExPASy Swiss-Prot
Match: NIA7_HORVU (Nitrate reductase [NAD(P)H] OS=Hordeum vulgare GN=NAR-7 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 4.101e-48
Identity = 107/223 (47.98%), Postives = 136/223 (60.99%), Query Frame = 2
Query:  113 MAASVD-NRQFTHLESLNGIVRPYKPGPNHRSDSPIQSSQNGFAPKKQVFLEEDWSSDDENEADYMEIIRKGNSELEPSILDPRDEGTADNWIERNPSMVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNHGPVPKASWVDWTIEVTGLVKRPARFTMDQLMHEFPSREFPVTLVCAGNRPKEQNHG*TKHWI*LGSGWG---FPFGVARSTNLRHVLKR 769
            MAASV+ NRQ +          P+      ++   + SS  G   +++   + D   +D    D+  +      ++EPS+ DPRDE T+D W++R+P++VRLTGKHPFN E PL RLM HGFITPVPLHYVRNHG VPKA W  WT+EVTGLVKRP +FTM++L+  F + EFPVTLVCAGNR KEQN          G  WG       V R   LR VL+R
Sbjct:    1 MAASVEYNRQVS--------AHPWPTNAQPKAAFDLFSSSGG--GRRRSGADSDSDDEDSVPPDWRSLYSP-RLDVEPSVKDPRDEATSDAWVKRHPALVRLTGKHPFNSEPPLPRLMSHGFITPVPLHYVRNHGAVPKADWSTWTVEVTGLVKRPVKFTMEELVTGFQAVEFPVTLVCAGNRRKEQNMVRQSS----GFNWGPGAISTTVWRGVRLRDVLRR 208          

HSP 2 Score: 23.8682 bits (50), Expect = 4.101e-48
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 1
Query:  817 FKGPKDLAGGGGSQKG 864
            F+G +DL GGGG + G
Sbjct:  222 FEGAEDLPGGGGCKYG 237          
BLAST of DY304668 vs. ExPASy Swiss-Prot
Match: NIA3_MAIZE (Nitrate reductase [NADH] 3 OS=Zea mays PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 9.659e-39
Identity = 95/202 (47.03%), Postives = 111/202 (54.95%), Query Frame = 2
Query:  281 DDENEADYMEIIRK---GNSELEPSILDPRDEGTADNWIERNPSMVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNHGPVPKASWVDWTIEVTGLVKRPARFTMDQLMHEFPSREFPVTLVCAGNRPKEQNHG*TKHWI*LGSGWG---FPFGVARSTNLRHVLKRMWDN*AVKNXXXXXXXXXXPRIWPGGGDPKKGT 868
            DD+   D  E        N  +E S+   RDEGT D W+E + S++RLTGKH  N E P  RLM+HGFITPVP HYVRNHGPVP+  W  WT+EVTGLV+RP   TMD+L  +FP+ E PVTLVCAGNR KEQN         LG  WG       V R   L  VL+R       +               PGGG  K GT
Sbjct:   62 DDDPSGDRHETYGSHYLANLGVEQSV---RDEGTVDAWVESSQSLIRLTGKHSLNGELP--RLMRHGFITPVPRHYVRNHGPVPRGDWATWTVEVTGLVRRPRALTMDELARDFPALELPVTLVCAGNRRKEQNMVRQT----LGFNWGPGAVSTSVWRGARLSDVLRRCGS--MSRKGGALFVCFEGAEDLPGGGGTKYGT 252          
BLAST of DY304668 vs. ExPASy Swiss-Prot
Match: NIA_PHYIN (Nitrate reductase [NADPH] OS=Phytophthora infestans GN=NIAA PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 9.103e-38
Identity = 61/110 (55.45%), Postives = 74/110 (67.27%), Query Frame = 2
Query:  350 LDPRDEGTADNWIERNPSMVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNHGPVPKASWVDWTIEVTGLVKRPARFTMDQLMHEFPSR--EFPVTLVCAGNRPKEQN 673
            +DPRD GT D W+ R+P ++RLTG+HPFN E PL       FITP+ LHYVRNHGPVP+  W   T  + GLVK+P  F M++L+  F      FPV LVCAGNR KEQN
Sbjct:   84 IDPRDVGTPDEWVPRHPELIRLTGRHPFNSEPPLKYAST--FITPMALHYVRNHGPVPRLEWDTHTFSIDGLVKKPRTFGMNELVTTFEQETVTFPVLLVCAGNRRKEQN 191          

HSP 2 Score: 51.2174 bits (121), Expect = 9.103e-38
Identity = 22/48 (45.83%), Postives = 32/48 (66.67%), Query Frame = 3
Query:  663 KNKTMVKQNIGFNWGAAGVSPSVWRGVPIYVMCSSACGIIRP*KMGAW 806
            K + M+K+ IGF+WGAAG S + W GVP++V+  +ACG+ R      W
Sbjct:  188 KEQNMIKKTIGFSWGAAGCSTAEWTGVPLHVLL-TACGVDREKAQWVW 234          
BLAST of DY304668 vs. ExPASy Swiss-Prot
Match: NIA_VOLCA (Nitrate reductase [NADH] OS=Volvox carteri GN=NITA PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.493e-34
Identity = 58/108 (53.70%), Postives = 78/108 (72.22%), Query Frame = 2
Query:  350 LDPRDEGTADNWIERNPSMVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNHGPVPKASWVDWTIEVTGLVKRPARFTMDQLMHEFPSREFPVTLVCAGNRPKEQN 673
            +D +D+ T DNW+ R+P ++RLTG+HP NCE P+  LM++GFITP  +H+VRNHG  P+  W +  IE+ GLV +P   TMD+L+   PS  FP TLVCAGNR KE+N
Sbjct:   42 VDKKDQDTPDNWVRRDPRILRLTGRHPLNCEPPMDVLMEYGFITPPAVHFVRNHGAAPRIPWAEHRIEINGLVDKPLFLTMDELV-ALPSITFPCTLVCAGNRRKEEN 148          

HSP 2 Score: 35.4242 bits (80), Expect = 1.493e-34
Identity = 13/27 (48.15%), Postives = 18/27 (66.67%), Query Frame = 3
Query:  663 KNKTMVKQNIGFNWGAAGVSPSVWRGV 743
            K + M+K++IGFNWG    S + W GV
Sbjct:  145 KEENMLKKSIGFNWGPCATSTTYWTGV 171          
BLAST of DY304668 vs. ExPASy Swiss-Prot
Match: NIA_FUSOX (Nitrate reductase [NADPH] OS=Fusarium oxysporum GN=NIA PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.009e-30
Identity = 55/117 (47.01%), Postives = 76/117 (64.96%), Query Frame = 2
Query:  332 ELEPSILDPRDEGTADNWIERNPSMVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNHGPVPKA---SWVDWTIEVTGLVKRPARFTMDQLMHEFPSREFPVTLVCAGNRPKEQN 673
            +  P  +   D  T DN++ER+P ++RLTG HPFN EAPL+ L   GF+T   LHYVRNHG VP+      +DW  E++GLV+ P +  +  L++++    +PVT VCAGNR KEQN
Sbjct:   72 KFSPKSVLKEDLKTPDNFVERDPRLIRLTGVHPFNVEAPLSDLYDEGFLTSENLHYVRNHGHVPRCEDDDILDWEFEISGLVENPIKMNVRDLINDYQQLTYPVTFVCAGNRRKEQN 188          

HSP 2 Score: 36.5798 bits (83), Expect = 2.009e-30
Identity = 15/36 (41.67%), Postives = 25/36 (69.44%), Query Frame = 3
Query:  663 KNKTMVKQNIGFNWGAAGVSPSVWRGVPIYVMCSSA 770
            K + +V++  GF+WG AG+S ++W GV I  + S+A
Sbjct:  185 KEQNIVRKTKGFSWGPAGLSTALWTGVAIGDLLSAA 220          
BLAST of DY304668 vs. ExPASy Swiss-Prot
Match: NIA_BEABA (Nitrate reductase [NADPH] OS=Beauveria bassiana GN=NIA PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 5.775e-30
Identity = 55/114 (48.25%), Postives = 72/114 (63.16%), Query Frame = 2
Query:  341 PSILDPRDEGTADNWIERNPSMVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNHGPVPKA---SWVDWTIEVTGLVKRPARFTMDQLMHEFPSREFPVTLVCAGNRPKEQN 673
            P+ + P D  T D+ + R+P ++RLTG HPFN E PLT L   GF+    LHYVRNHGPVP       ++WT  V GLV++P    +  L+ ++    +PVTLVCAGNR KEQN
Sbjct:   65 PTHVLPEDLKTPDHRVNRDPRLIRLTGVHPFNVEPPLTDLYDEGFLNSENLHYVRNHGPVPHCPDDESLNWTFTVDGLVEKPFTIAVRDLIQKYDQFTYPVTLVCAGNRRKEQN 178          

HSP 2 Score: 40.4318 bits (93), Expect = 5.775e-30
Identity = 15/29 (51.72%), Postives = 24/29 (82.76%), Query Frame = 3
Query:  663 KNKTMVKQNIGFNWGAAGVSPSVWRGVPI 749
            K + +V+++ GF+WGAAG+S ++W GVPI
Sbjct:  175 KEQNVVRKSKGFSWGAAGLSTALWTGVPI 203          
BLAST of DY304668 vs. ExPASy Swiss-Prot
Match: NIA_LEPMC (Nitrate reductase [NADPH] OS=Leptosphaeria maculans GN=NIAD PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 5.122e-28
Identity = 56/115 (48.70%), Postives = 74/115 (64.35%), Query Frame = 2
Query:  338 EPSILDPRDEGTADNWIERNPSMVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNHGPVPKA---SWVDWTIEVTGLVKRPARFTMDQLMHEFPSREFPVTLVCAGNRPKEQN 673
            +P +LD  D+ T D  + R+P ++RLTG HPFN E PLT L   GF+T   L YVRNHG VP+      +DW   + G+V  P + T+ QL+ E+ +  +PVTLVCAGNR KEQN
Sbjct:   66 KPQVLDI-DKPTPDAHVPRDPRLIRLTGVHPFNTEPPLTDLYNEGFLTSPELFYVRNHGAVPEVQDEECLDWEFSIEGMVANPLKITLRQLLEEYENVTYPVTLVCAGNRRKEQN 179          

HSP 2 Score: 32.3426 bits (72), Expect = 5.122e-28
Identity = 13/27 (48.15%), Postives = 21/27 (77.78%), Query Frame = 3
Query:  663 KNKTMVKQNIGFNWGAAGVSPSVWRGV 743
            K + +V+++ GF WGAAGVS +++ GV
Sbjct:  176 KEQNVVRKSKGFAWGAAGVSTALFTGV 202          
BLAST of DY304668 vs. ExPASy Swiss-Prot
Match: NIA_NEUCR (Nitrate reductase [NADPH] OS=Neurospora crassa GN=nit-3 PE=1 SV=3)

HSP 1 Score: 111.309 bits (277), Expect = 1.469e-27
Identity = 58/122 (47.54%), Postives = 77/122 (63.11%), Query Frame = 2
Query:  356 PRDEGTADNWIERNPSMVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNHGPVPKA--------------SWVDWTIEVTGLVKRPARFTMDQLM--HEFPSREFPVTLVCAGNRPKEQN 673
            P D  T D+ I R+P ++RLTG HPFN E PLT L +HGF+TP  LHYVRNHGP+P +              S ++W   V GLV+ P + ++ +LM   ++ +  +PVTLVCAGNR KEQN
Sbjct:  129 PTDLKTPDHLI-RDPRLIRLTGSHPFNVEPPLTALFEHGFLTPQNLHYVRNHGPIPSSVATPPATINKEEDDSLLNWEFTVEGLVEHPLKISVRELMDASKWDNVTYPVTLVCAGNRRKEQN 249          

HSP 2 Score: 33.4982 bits (75), Expect = 1.469e-27
Identity = 11/27 (40.74%), Postives = 21/27 (77.78%), Query Frame = 3
Query:  663 KNKTMVKQNIGFNWGAAGVSPSVWRGV 743
            K + +++++ GF+WGA G+S ++W GV
Sbjct:  246 KEQNVLRKSKGFSWGAGGLSTALWTGV 272          
BLAST of DY304668 vs. ExPASy Swiss-Prot
Match: NIA_PICAN (Nitrate reductase [NADPH] OS=Pichia angusta GN=YNR1 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.709e-27
Identity = 63/136 (46.32%), Postives = 85/136 (62.50%), Query Frame = 2
Query:  356 PRDEGTADNWIERNPSMVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNHGP---VPKASWVDWTIEVTGLVKRPARFTMDQLMHEFPSREFPVTLVCAGNRPKEQNHG*TKHWI*LGSGWGFPFGVA-RSTNL 751
            P D  T DN++ R+P ++RLTG HPFN E PLT+L   GF+TPV LH+VRNHGP   VP  + +DW + + G+V+ P +  +  +M +F     PVT+VCAGNR KEQN         +  G GF +G A  ST+L
Sbjct:   38 PTDLKTKDNFVARDPDLLRLTGSHPFNSEPPLTKLYDSGFLTPVSLHFVRNHGPVPYVPDENILDWEVSIEGMVETPYKIKLSDIMEQFDIYSTPVTMVCAGNRRKEQNM--------VKKGAGFNWGAAGTSTSL 165          
BLAST of DY304668 vs. ExPASy Swiss-Prot
Match: NIA_EMENI (Nitrate reductase [NADPH] OS=Emericella nidulans GN=niaD PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.578e-26
Identity = 55/115 (47.83%), Postives = 73/115 (63.48%), Query Frame = 2
Query:  338 EPSILDPRDEGTADNWIERNPSMVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNHGPVPKASWVD---WTIEVTGLVKRPARFTMDQLMHEFPSREFPVTLVCAGNRPKEQN 673
            EP+ +   D+ T D+ + R+P ++RLTG HPFN E PLT L Q GF+TP  L YVRNHGPVP     D   W + + GLV++P   +  Q++  +     P+TLVCAGNR KEQN
Sbjct:   45 EPTEVLSLDKTTPDSHVPRDPRLIRLTGVHPFNVEPPLTALFQQGFLTPPELFYVRNHGPVPHVRDEDIPNWELRIEGLVEKPITLSFKQILQNYDQITAPITLVCAGNRRKEQN 159          

HSP 2 Score: 26.5646 bits (57), Expect = 1.578e-26
Identity = 9/26 (34.62%), Postives = 19/26 (73.08%), Query Frame = 3
Query:  663 KNKTMVKQNIGFNWGAAGVSPSVWRG 740
            K +  V+++ GF+WG+A +S +++ G
Sbjct:  156 KEQNTVRKSKGFSWGSAALSTALFTG 181          
The following BLAST results are available for this feature:
BLAST of DY304668 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
NIA7_HORVU4.101e-4847.98Nitrate reductase [NAD(P)H] OS=Hordeum vulgare GN=... [more]
NIA3_MAIZE9.659e-3947.03Nitrate reductase [NADH] 3 OS=Zea mays PE=3 SV=1[more]
NIA_PHYIN9.103e-3855.45Nitrate reductase [NADPH] OS=Phytophthora infestan... [more]
NIA_VOLCA1.493e-3453.70Nitrate reductase [NADH] OS=Volvox carteri GN=NITA... [more]
NIA_FUSOX2.009e-3047.01Nitrate reductase [NADPH] OS=Fusarium oxysporum GN... [more]
NIA_BEABA5.775e-3048.25Nitrate reductase [NADPH] OS=Beauveria bassiana GN... [more]
NIA_LEPMC5.122e-2848.70Nitrate reductase [NADPH] OS=Leptosphaeria maculan... [more]
NIA_NEUCR1.469e-2747.54Nitrate reductase [NADPH] OS=Neurospora crassa GN=... [more]
NIA_PICAN1.709e-2746.32Nitrate reductase [NADPH] OS=Pichia angusta GN=YNR... [more]
NIA_EMENI1.578e-2647.83Nitrate reductase [NADPH] OS=Emericella nidulans G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAQ9YF15RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304668 ID=DY304668; Name=DY304668; organism=Citrus clementina; type=EST; length=984bp
CAAAACTCTTAAGAGGTTCGTAACTCTAGAAAACTTTTCAAGTTACACCT
TAAAAAAAAAAAAAAAATAGAGTGAGTCATAAAAGCCAAACCCCTTTTCT
TTTGAATCTACAATGGCGGCCTCGGTTGACAATCGCCAATTCACCCACCT
TGAATCCTTAAACGGCATCGTTCGTCCTTATAAACCCGGTCCAAATCACA
GGTCTGACTCCCCTATTCAATCCTCCCAAAATGGGTTCGCTCCCAAGAAG
CAAGTCTTTCTCGAGGAAGACTGGTCGAGTGACGATGAAAATGAGGCTGA
TTATATGGAGATAATACGCAAAGGCAACAGTGAACTTGAGCCGTCGATCT
TGGACCCCAGAGATGAAGGCACTGCCGATAACTGGATCGAGCGGAACCCC
TCCATGGTCCGTCTCACAGGGAAGCACCCCTTCAACTGCGAGGCTCCCTT
GACCCGGCTCATGCAACACGGTTTCATAACCCCGGTCCCGCTTCATTACG
TGCGTAACCACGGGCCGGTCCCCAAGGCATCATGGGTCGACTGGACCATC
GAAGTAACCGGTTTGGTCAAGCGACCAGCCCGGTTCACTATGGATCAGCT
AATGCACGAATTCCCGAGCCGGGAGTTTCCTGTCACGCTTGTTTGTGCAG
GTAACAGACCCAAAGAACAAAACCATGGTTAAACAAAACATTGGATTTAA
CTGGGGAGCGGCTGGGGTTTCCCCTTCGGTGTGGCGCGGAGTACCAATTT
ACGTCATGTGCTCAAGCGCATGTGGGATAATTAGGCCGTAAAAAATGGGG
GCCTGGAACTTGGGCTTTTAAGGGGCCCAAGGATTTGGCCGGGGGGGGGG
GATCCCAAAAAGGGCACAAAAAACCCGGGAAAGAATTTCGAAAGGATCCA
CCCGAGGAAATCAAAAATAAGCGACCATGCAAAAGGGGGGACCTCTTAAA
AGCAGGAACTCCGGAAGTTAAGGGGGAGGGGAAA
back to top