DY304707

Overview
NameDY304707
Unique NameDY304707
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length954
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304707 vs. ExPASy Swiss-Prot
Match: YCSN_BACSU (Uncharacterized oxidoreductase ycsN OS=Bacillus subtilis GN=ycsN PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.643e-11
Identity = 59/213 (27.70%), Postives = 95/213 (44.60%), Query Frame = 1
Query:  121 LRVSQLSYGAW-VSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGP-------NDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQ--ITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASG 729
            L+ S++ +G W ++  N  D  E  SL++ C DHG+  FD+A++Y     E++ G A+      R +I + TK     + P       +    S+ HI+   + SL  L  DY+D++  HRPD     E    A   +   G   Y+G S +   Q  + E++ + E+L     +  Q E +      +    L L     I    WSPLA G
Sbjct:   10 LQFSRVIHGLWRLNEWNYSDA-ELLSLIEWCIDHGITTFDHADIYGGYTCEKLFGNALALSPGLRENIELVTKCGIVLESPERPAHRSHHYNTSKSHILASVEQSLMNLRTDYIDMLLIHRPDPLMDPEGVAEAFQALKCSGKVRYFGVSNFKDHQYRMLESY-LPEKL-----VTNQIELSAYELENMLDGTLNLCQEKRIPPMAWSPLAGG 215          
BLAST of DY304707 vs. ExPASy Swiss-Prot
Match: AAD4_YEAST (Probable aryl-alcohol dehydrogenase AAD4 OS=Saccharomyces cerevisiae GN=AAD4 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.661e-11
Identity = 49/199 (24.62%), Postives = 94/199 (47.24%), Query Frame = 1
Query:  172 LDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKI--------FWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGK 744
            ++ ++A  LL    + G N  D A  Y N  +E  +G+ ++     R  IV++TK           GG+  N  G  +  +    + SL++L  D++D++Y H  D  + IEE + +++ ++ +G   Y G S+  A  ++ A   A         + Q ++N+L+R   E + +P+  ++G+ L  W  +  G    K
Sbjct:    4 MNKEQAFELLDAFYEAGGNCIDTANSYQNEESEIWIGEWMKSRKL-RDQIVIATKFTGDYKKYEVGGGKSANYCGNHKHSLHVSVRDSLRKLQTDWIDILYVHWWDYMSSIEEVMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSHGKTPFSIYQGKWNVLNR-DFERDIIPMARHFGMALAPWDVMGGGRFQSK 200          
BLAST of DY304707 vs. ExPASy Swiss-Prot
Match: YEAE_ECOLI (Uncharacterized protein yeaE OS=Escherichia coli (strain K12) GN=yeaE PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.244e-11
Identity = 59/213 (27.70%), Postives = 98/213 (46.01%), Query Frame = 1
Query:   91 MQYKHLGRSG-LRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIF-WGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLA 723
            MQ K +  SG + +  +  G W    +    K   + L+   + G+   D AE+YA+G AE+++G+A+  L   R  + + +K++ W   G        +  +   +ASL+RL+ DY+D+   H    S   EETV AM  +I +G    WG S      + E W +            Q  Y++ SR  +E + LP      + +  +SPLA
Sbjct:    1 MQQKMIQFSGDVSLPAVGQGTWYMGEDASQRKTEVAALRAGIELGLTLIDTAEMYADGGAEKVVGEALTGL---REKVFLVSKVYPWNAGG--------QKAINACEASLRRLNTDYLDLYLLHW-SGSFAFEETVAAMEKLIAQGKIRRWGVSNLDYADMQELWQLPGGNQCA---TNQVLYHLGSR-GIEYDLLPWCQQQQMPVMAYSPLA 197          
The following BLAST results are available for this feature:
BLAST of DY304707 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
YCSN_BACSU1.643e-1127.70Uncharacterized oxidoreductase ycsN OS=Bacillus su... [more]
AAD4_YEAST3.661e-1124.62Probable aryl-alcohol dehydrogenase AAD4 OS=Saccha... [more]
YEAE_ECOLI6.244e-1127.70Uncharacterized protein yeaE OS=Escherichia coli (... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ9YH17RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304707 ID=DY304707; Name=DY304707; organism=Citrus clementina; type=EST; length=954bp
CTCTCTCAGTCAGTTTCCAGATTTTCTCGTACAGTTGCCCAACAGGCCAA
AAAACAGACAACAAAAAGGTTAAAAAAGCAAAATTACAAAATGCAGTACA
AGCACTTGGGGAGATCGGGGCTGAGAGTGAGCCAGCTCTCGTACGGAGCG
TGGGTCAGCTTCGGGAACCAGCTGGACGTGAAGGAGGCGAAGTCGCTCTT
GCAATGCTGCCGCGACCACGGCGTCAACTTCTTCGACAATGCCGAGGTCT
ACGCCAACGGCCGCGCGGAAGAGATCATGGGTCAGGCCATTCGCGAGCTC
GGGTGGAAGCGATCCGACATCGTCGTTTCCACCAAGATCTTTTGGGGCGG
CCAGGGCCCCAACGATAAAGGCCTCTCCAGAAAACACATTGTCGAGGGCA
CCAAAGCTTCCTTGAAACGCCTCGACATGGATTACGTCGACGTTATTTAT
TGTCACAGGCCGGACACGTCGACACCGATAGAGGAGACGGTGAGGGCGAT
GAATTATGTGATTGATAAGGGGTGGGCGTTTTACTGGGGAACAAGTGAGT
GGTCGGCGCAGCAGATCACCGAGGCTTGGGGGATTGCTGAGCGCTTGGAT
TTGGTGGGCCCCATTGTTGAGCAACCAGAGTATAACATGTTGTCTAGGCA
CAAAGTTGAAGCTGAGTACCTCCCTTTATACTCCAATTATGGCATAGGTC
TTACCACATGGAGTCCACTTGCATCTGGAGTCCTCACTGGAAAATATAAC
AAGGGATCTATACCACCTGACAGTCGGTTTGCTTTGGAAAATTAAAAAAT
CTTGCTAGCCCAACACTGGTCGATGATGTGCTGAAAAAAAGTTAACCAAC
TGAAGCAAATTGCAATGAACTAAGCCTGGCCTTTACCCAAACTTGGAAAT
TGCTTGTGGGGCTTCAAATCCAAATGGAACCCTCCGTTAAAACTGGGGGC
CCAA
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