DY304772

Overview
NameDY304772
Unique NameDY304772
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length970
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304772 vs. ExPASy Swiss-Prot
Match: TRPE_NEIG1 (Anthranilate synthase component 1 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=trpE PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.322e-40
Identity = 91/210 (43.33%), Postives = 128/210 (60.95%), Query Frame = 1
Query:  328 SNMTSEAYKNAVLEAKEHIQAGDIFQIVLSQRFERRTFADPFEVYRALRVVNPSPYMTYLQARGCILVASSPEILTRVKKNKIVNRPLAGTVRRGRTTEEDEMLETQLLKDAKQCAEHVMLVDLGRNDVGKVARSGSVKVEKLMNVERYSHVMHISSPITGELQDRLICWEALRGAPPVGNR*GSNKGKTMELIDNWREKKLAP*MGGLG 957
            S    E +K  V + K++I AGD  Q+V SQR       +P  +YRALR +NPSPY+ Y       +V SSPEIL R +++ ++ RP+AGT  RG+T  ED   E  LL DAK+ AEHVML+DLGRNDVG+++++G VKV   M +E+YSHVMHI S + G L++ +   + L    P G   G+ K + ME+I+    +K     G +G
Sbjct:  217 SEFGEEPFKACVDKIKDYIFAGDCMQVVPSQRMSMEFTDNPLALYRALRTLNPSPYLFYYDFGDFHIVGSSPEILVRRERDDVIVRPIAGTRLRGKTPAEDLANEQDLLSDAKEIAEHVMLIDLGRNDVGRISKTGEVKVTDKMVIEKYSHVMHIVSNVEGCLKEGVTNMDILAATFPAGTLSGAPKVRAMEIIEEIEPEKRGIYGGAVG 426          
BLAST of DY304772 vs. ExPASy Swiss-Prot
Match: TRPE1_HALMA (Anthranilate synthase component 1 1 OS=Haloarcula marismortui GN=trpE1 PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 2.255e-40
Identity = 100/266 (37.59%), Postives = 143/266 (53.76%), Query Frame = 1
Query:  172 RLDQHSSVQRAYAEGLEHLEKLVARVQDIDLPRLAPGSIDLHTHHFGPPLKKSNMTSEAYKNAVLEAKEHIQAGDIFQIVLSQRFERRTFADPFEVYRALRVVNPSPYMTYLQARGCILVASSPEILTRVKKNKIVNRPLAGTVRRGRTTEEDEMLETQLLKDAKQCAEHVMLVDLGRNDVGKVARSGSVKVEKLMNVERYSHVMHISSPITGELQDRLICWEALRGAPPVGNR*GSNKGKTMELIDNWREKKLAP*MGGLGGVSF 969
            R+D   + + AY  G +H   L       D P +    ++     F     +S+ T E++ + V   K++I+ GD FQ  +SQR        P E + ALR VNP+PY   L+  G  LV++SPE+L     ++I   P+AGT  RG T + D+ LET LL D K+ AEH MLVDL RND+GKV++ GSV+V     V+RYS VMH+ S + G L+D     +A+    P G   G+ K +TME+ID     +  P  G +G   F
Sbjct:  162 RVDDFETPELAYEFGKQHALDLARAAAQGD-PSVEDPPVETDEATF-----ESDCTRESFADRVQTVKQYIRDGDTFQANVSQRLRAPAAVHPVEAFDALRTVNPAPYSALLEFPGVDLVSASPELLLHRDGDRIETEPIAGTRPRGETPDADDRLETDLLDDEKERAEHAMLVDLERNDLGKVSKFGSVEVSDYRRVDRYSEVMHLVSVVEGRLRDGASLQDAIAAVFPGGTITGAPKPRTMEIIDEVEATRRGPYTGSIGLFGF 421          
BLAST of DY304772 vs. ExPASy Swiss-Prot
Match: TRPE_METTM (Anthranilate synthase component 1 OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=trpE PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.945e-40
Identity = 99/237 (41.77%), Postives = 143/237 (60.34%), Query Frame = 1
Query:  262 LPRLAPGSID-LHTHHFGPPLKKSNMTSEAYKNAVLEAKEHIQAGDIFQIVLSQRFERRTFADPFEVYRALRVVNPSPYMTYLQARGCILVASSPEILTRVKKNKIVNRPLAGTVRRGRTTEEDEMLETQLLKDAK-QCAEHVMLVDLGRNDVGKVARSGSVKVEKLMNVERYSHVMHISSPITGELQDRLICWEALRGAPPVGNR*GSNKGKTMELIDNWREKKLAP*MGGLGGVS 966
            LP ++P   D + T   G   +++ ++   Y + VLEAKE I+ G+IFQ VLS   + R   D    Y +LR +NPSPYM +L+     +  SSPE+L RV+  +I   P+AGT  RGRT EED ++ + LL D K Q AEH+MLVDL RND+G+V+  GSV+V + M ++R+SHV HI S +TG+L+D +   +AL    P G   G+ K + ME+I++          G LG +S
Sbjct:  161 LPDISPLLGDEVPTGTLGYRRERTLLSKRRYMDMVLEAKERIREGEIFQAVLSSATDYRLRGDRLAFYESLRRINPSPYMYHLKLGEREITGSSPEMLVRVEDRRIETFPIAGTRPRGRTEEEDGVIASDLLSDEKEQLAEHLMLVDLARNDIGRVSEFGSVEVPEYMTIKRFSHVQHILSHVTGKLRDGMDAVDALGAVFPAGTVSGAPKIRAMEIIESLEGVPRNAYAGALGYLS 397          
BLAST of DY304772 vs. ExPASy Swiss-Prot
Match: TRPE_SULSO (Anthranilate synthase component 1 OS=Sulfolobus solfataricus GN=trpE PE=1 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 3.847e-40
Identity = 95/213 (44.60%), Postives = 128/213 (60.09%), Query Frame = 1
Query:  331 NMTSEAYKNAVLEAKEHIQAGDIFQIVLSQRFERRTFA-DPFEVYRALRVVNPSPYMTYLQARGCILVASSPEILTRVKKNKIVNRPLAGTVRRGRTTEEDEMLETQLLKDAKQCAEHVMLVDLGRNDVGKVARSGSVKVEKLMNVERYSHVMHISSPITGELQDRLICWEALRGAPPVGNR*GSNKGKTMELIDNWREKKLAP*MGGLGGVS 966
            ++   +Y+  V E+ E+I++G IFQ+VLS RF R  F+ DP  +Y  LR +NPSPYM YL+     L+ SSPE+L RV+ N +   P+AGT  RG   EED  LE +L+   K  AEH+MLVDL RND+GKV   G+VKV +LM VE+YSHV HI S + G L+ +      L    P G   G+ K   M +I+   E K  P  G +G +S
Sbjct:  154 SLNKNSYERIVSESLEYIRSGYIFQVVLS-RFYRYIFSGDPLRIYYNLRRINPSPYMFYLKFDEKYLIGSSPELLFRVQDNIVETYPIAGTRPRGADQEEDLKLELELMNSEKDKAEHLMLVDLARNDLGKVCVPGTVKVPELMYVEKYSHVQHIVSKVIGTLKKKYNALNVLSATFPAGTVSGAPKPMAMNIIETLEEYKRGPYAGAVGFIS 365          
BLAST of DY304772 vs. ExPASy Swiss-Prot
Match: TRPE_HALVO (Anthranilate synthase component 1 OS=Halobacterium volcanii GN=trpE PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.569e-40
Identity = 98/247 (39.68%), Postives = 143/247 (57.89%), Query Frame = 1
Query:  229 EKLVARVQDIDLPRLAPGSIDLHTHHFGPPLKKSNMTSEAYKNAVLEAKEHIQAGDIFQIVLSQRFERRTFADPFEVYRALRVVNPSPYMTYLQARGCILVASSPEILTRVKKNKIVNRPLAGTVRRGRTTEEDEMLETQLLKDAKQCAEHVMLVDLGRNDVGKVARSGSVKVEKLMNVERYSHVMHISSPITGELQDRLICWEALRGAPPVGNR*GSNKGKTMELIDNWREKKLAP*MGGLGGVSF 969
            E++  +++  D P  APG  +      G        + E Y+ AV + KEH++ GDI+Q V+S+  + R   DP  +Y +LR VNPSPYM  L+     +V +SPE L  V+ +++V  P+AGT +RG    ED  L  +LL DAK+ AEH MLVDLGRNDV +V+  GSV+VE  M++ +YSHV HI S ++G L      ++A R   P G   G+ K + ME+ID+   +      GG+G  S+
Sbjct:  219 ERVAEKLRAADDP--APGGFERTGEDAG--------SREEYEAAVRKTKEHVRDGDIYQGVISRTRKLRGQVDPVGLYASLREVNPSPYMFLLRHGDRRVVGASPETLVSVRGDRVVVNPIAGTCQRGSGPVEDRRLAGELLADAKERAEHTMLVDLGRNDVRRVSTPGSVRVEDFMSIIKYSHVQHIESTVSGTLDADADAFDATRATFPAGTLTGAPKVRAMEIIDDLEAEPRGVYGGGVGYYSW 455          
BLAST of DY304772 vs. ExPASy Swiss-Prot
Match: TRPE_METTH (Anthranilate synthase component 1 OS=Methanobacterium thermoautotrophicum GN=trpE PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.702e-38
Identity = 88/206 (42.72%), Postives = 123/206 (59.71%), Query Frame = 1
Query:  349 YKNAVLEAKEHIQAGDIFQIVLSQRFERRTFADPFEVYRALRVVNPSPYMTYLQARGCILVASSPEILTRVKKNKIVNRPLAGTVRRGRTTEEDEMLETQLLKDAKQCAEHVMLVDLGRNDVGKVARSGSVKVEKLMNVERYSHVMHISSPITGELQDRLICWEALRGAPPVGNR*GSNKGKTMELIDNWREKKLAP*MGGLGGVS 966
            Y   V EA+E I  G+IFQ VLS   + R   D   +Y ALR VNPSPYM +L+     +  SSPE+L RV+  +I   P+AGT  RG+T  EDE +  +LL D K+ AEH+MLVDL RND+G+++  G+V+V + M + R+SHV HI S +TG L+  +   +AL    P G   G+ K + ME+I++          G LG +S
Sbjct:  189 YLGMVEEARERIAEGEIFQAVLSNATDYRLRGDRLALYEALRRVNPSPYMYHLKLGSREITGSSPEMLVRVEDKQIETFPIAGTRPRGKTPHEDERIAAELLSDEKELAEHLMLVDLARNDLGRISEFGTVQVPEYMTIRRFSHVQHILSHVTGRLRKGMDALDALGAVFPAGTVSGAPKIRAMEIIESLEGVPRNAYAGALGYLS 394          
BLAST of DY304772 vs. ExPASy Swiss-Prot
Match: TRPE3_HALMA (Anthranilate synthase component 1 3 OS=Haloarcula marismortui GN=trpE3 PE=3 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 1.048e-37
Identity = 94/239 (39.33%), Postives = 131/239 (54.81%), Query Frame = 1
Query:  271 LAPGSIDLHTHHFGPPLKKSNMTSE------AYKNAVLEAKEHIQAGDIFQIVLSQRFERRTFADPFEVYRALRVVNPSPYMTYLQARGCILVASSPEILTRVKKNKIVNRPLAGTVRRGRTTEEDEMLETQLLKDAKQCAEHVMLVDLGRNDVGKVARSGSVKVEKLMNVERYSHVMHISSPITGELQDRLICWEALRGAPPVGNR*GSNKGKTMELIDNWREKKLAP*MGGLGGVSF 969
            LA  +I    H    P   S  T E      A+ + V + K++++ GD FQ  +S R        P + + A+R VNP+PY   L+  G  LV++SPE+L  V  ++++  P+AGT  RG T  EDE LE  L  D K+ AEH MLVDL RND+GKV+  GSV V +   V+RYS VMH+ S I GEL+D +   +A+    P G   G+ K +TME+ID     +  P  G +G   F
Sbjct:  190 LAQDAIHGEKHVQSQPTAASQATFESECGEAAFADRVRQIKQYVRDGDTFQTNVSHRLTAPAAVHPVDTFDAVRRVNPAPYSALLEFPGVDLVSASPELLLDVDGDQLLTEPIAGTRPRGATPSEDEDLEVDLCSDEKERAEHAMLVDLERNDLGKVSEYGSVDVAEYRRVDRYSEVMHLVSLIEGELRDAVSIADAVAAVFPGGTITGAPKPRTMEIIDEVERTRRGPYTGSIGMFGF 428          
BLAST of DY304772 vs. ExPASy Swiss-Prot
Match: TRPE_PYRKO (Anthranilate synthase component 1 OS=Pyrococcus kodakaraensis GN=trpE PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.787e-37
Identity = 86/205 (41.95%), Postives = 121/205 (59.02%), Query Frame = 1
Query:  343 EAYKNAVLEAKEHIQAGDIFQIVLSQRFERRTFADPFEVYRALRVVNPSPYMTYLQARGCILVASSPEILTRVKKNKIVNRPLAGTVRRGRTTEEDEMLETQLLKDAKQCAEHVMLVDLGRNDVGKVARSGSVKVEKLMNVERYSHVMHISSPITGELQDRLICWEALRGAPPVGNR*GSNKGKTMELIDNWREKKLAP*MGGLG 957
            E +   V   KE+I +GD+FQ+VLS+ +  RT  D  E+Y+ L  +NPSPY   L+    + V +SPE +  V+       P+AGT  RGRT EED  LE  LL D K+ AEHVMLVDL RNDV +V++ GSV++ +  +V +YSHV HI S + GEL +    ++A+  A P G   G+ K + ME+ID     +     G +G
Sbjct:  170 EEFVEIVRAGKEYIYSGDVFQVVLSREYRVRTDLDALEIYKRLVELNPSPYTFILEFEKTV-VGASPETMGSVEGRTFKINPIAGTAPRGRTGEEDRELEKALLSDEKERAEHVMLVDLARNDVRRVSKPGSVRLTRFFDVLKYSHVQHIESEVVGELDEGKNAFDAMEAAFPAGTLTGAPKIRAMEIIDELERSRRKVYGGAVG 373          
BLAST of DY304772 vs. ExPASy Swiss-Prot
Match: TRPE_AERPE (Anthranilate synthase component 1 OS=Aeropyrum pernix GN=trpE PE=3 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.787e-37
Identity = 92/233 (39.48%), Postives = 128/233 (54.94%), Query Frame = 1
Query:  259 DLPRLAPGSIDLHTHHFGPPLKKSNMTSEAYKNAVLEAKEHIQAGDIFQIVLSQRFERRTFADPFEVYRALRVVNPSPYMTYLQARGCILVASSPEILTRVKKNKIVNRPLAGTVRRGRTTEEDEMLETQLLKDAKQCAEHVMLVDLGRNDVGKVARSGSVKVEKLMNVERYSHVMHISSPITGELQDRLICWEALRGAPPVGNR*GSNKGKTMELIDNWREKKLAP*MGGLG 957
            D P  AP S        GP  + S    EA    V +A E I+AG+ FQ+VLS+    R +   F  Y  L   NPSPY+ Y +  G +++ SSPE+L +++  ++   P+AGT  RG T  ED  LE +LL D K+ AEHVMLVDL RND+ +V+  G+V+V   M++ERY  VMHI S + G  +      EAL+   P G   G+ K + ME+I    E+   P  G +G
Sbjct:  146 DTPLPAPASRKESFSAEGPTYETSRKGFEAM---VADALERIRAGEAFQVVLSRVERYRVWGSLFSAYERLADANPSPYLYYARLGGRVIIGSSPELLVKLEAGRVETHPIAGTRPRGSTPIEDIELEVELLNDEKERAEHVMLVDLARNDITRVSIPGTVQVTSFMDIERYETVMHIVSRVEGVTRPSTTFVEALKALHPAGTVSGAPKPRAMEIIAELEEEARGPYAGAIG 375          
BLAST of DY304772 vs. ExPASy Swiss-Prot
Match: TRPE_ARTGO (Anthranilate synthase component 1 OS=Arthrobacter globiformis GN=trpE PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 6.790e-37
Identity = 92/246 (37.40%), Postives = 136/246 (55.28%), Query Frame = 1
Query:  193 VQRAYAEGLEHLEKLVARVQDIDLPRLAPGSI-DLHTHHFGPPLKKSNMTSEAYKNAVLEAKEHIQAGDIFQIVLSQRFERRTFADPFEVYRALRVVNPSPYMTYLQ-----ARGCILVASSPEILTRVKKNKIVNRPLAGTVRRGRTTEEDEMLETQLLKDAKQCAEHVMLVDLGRNDVGKVARSGSVKVEKLMNVERYSHVMHISSPITGELQDRLICWEALRGAPPVGNR*GSNKGKTMELID 912
            V  A+ + +  +++L+AR   I  P L P S+ +     F   +++       Y  A+   KE I  G++FQ+V+S+RFE    A P +VYR LR  NPSPYM          R   +V SSPE L  V    ++  P+AG+  RG+T + D+ L  +LL D K+ AEH+MLVDL RND+ KV  +GSV V + M VER+SH+MH+ S + G L      ++ L+   P G   G+ K + + L+D
Sbjct:  188 VDEAWHDAVARVKELLAR---ISTPVLQPVSVLEPAALDFAASVQE-RWNEPEYLAALDRGKEAIVDGEVFQVVISRRFEMECGASPLDVYRVLRNTNPSPYMYIFSLEDAAGRQYSIVGSSPEALVTVTGEDVITHPIAGSRPRGKTVDADKALAEELLADQKERAEHLMLVDLSRNDLSKVCVAGSVDVTQFMEVERFSHIMHLVSTVVGRLAPTAKAYDVLKATFPAGTLSGAPKPRALRLLD 429          
The following BLAST results are available for this feature:
BLAST of DY304772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
TRPE_NEIG11.322e-4043.33Anthranilate synthase component 1 OS=Neisseria gon... [more]
TRPE1_HALMA2.255e-4037.59Anthranilate synthase component 1 1 OS=Haloarcula ... [more]
TRPE_METTM2.945e-4041.77Anthranilate synthase component 1 OS=Methanobacter... [more]
TRPE_SULSO3.847e-4044.60Anthranilate synthase component 1 OS=Sulfolobus so... [more]
TRPE_HALVO8.569e-4039.68Anthranilate synthase component 1 OS=Halobacterium... [more]
TRPE_METTH4.702e-3842.72Anthranilate synthase component 1 OS=Methanobacter... [more]
TRPE3_HALMA1.048e-3739.33Anthranilate synthase component 1 3 OS=Haloarcula ... [more]
TRPE_PYRKO1.787e-3741.95Anthranilate synthase component 1 OS=Pyrococcus ko... [more]
TRPE_AERPE1.787e-3739.48Anthranilate synthase component 1 OS=Aeropyrum per... [more]
TRPE_ARTGO6.790e-3737.40Anthranilate synthase component 1 OS=Arthrobacter ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ9YK15RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304772 ID=DY304772; Name=DY304772; organism=Citrus clementina; type=EST; length=970bp
CCCACCATGGGTTTGAACCCCTAGACCTCTTGTCTCAACTAAAGAGGTTT
TACCAACTAACTAGCTAGCATTCAATTCGTAAAATTGGTTTTGTTAGAAG
CTGTTATAGAGCTTTATTTGAATTGTTTTTTTTTTTTCCCTCCTCAGAAA
GTATATGTAATTCATTGGGTGAGGCTAGATCAACACTCCTCTGTCCAGAG
AGCATATGCTGAGGGATTGGAACACTTGGAGAAACTGGTGGCCAGAGTAC
AGGATATTGACTTGCCAAGGCTCGCCCCAGGTTCCATAGATTTACACACT
CATCATTTTGGTCCTCCATTAAAAAAGTCAAACATGACAAGCGAAGCATA
CAAAAATGCTGTACTAGAGGCAAAGGAACATATTCAGGCCGGGGATATCT
TTCAAATCGTACTTAGCCAACGTTTTGAACGTCGAACTTTTGCTGATCCA
TTTGAAGTTTATAGAGCACTGAGAGTTGTGAATCCGAGTCCATATATGAC
TTACTTGCAAGCAAGAGGGTGTATTCTGGTAGCTTCAAGTCCAGAAATTC
TTACTCGAGTAAAGAAGAACAAGATCGTGAATCGACCTTTGGCCGGAACA
GTTCGAAGAGGGAGGACGACCGAAGAAGATGAGATGTTGGAAACACAGTT
GCTAAAGGATGCAAAGCAATGTGCAGAGCATGTTATGCTGGTTGATTTGG
GCCGGAATGATGTTGGAAAGGTTGCAAGATCTGGTTCTGTGAAAGTGGAA
AAGCTGATGAATGTTGAACGGTATTCGCACGTAATGCACATAAGCTCCCC
GATTACGGGTGAATTGCAAGATCGTCTCATTTGCTGGGAAGCCCTGCGTG
GCGCACCGCCTGTTGGGAACCGTTAGGGGAGCAACAAAGGTAAAACCATG
GAATTAATTGACAATTGGAGGGAAAAAAAACTTGCCCCCTAAATGGGGGG
GTTGGGGGGGGTTTCCTTTA
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