DY304778
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304778 vs. ExPASy Swiss-Prot
Match: AP2M1_PONAB (AP-2 complex subunit mu OS=Pongo abelii GN=AP2M1 PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 6.598e-47 Identity = 95/214 (44.39%), Postives = 136/214 (63.55%), Query Frame = 1 Query: 166 IYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTCPVRQIGGCSFFYMRXXXXXXXXXXXXXXXXXXXFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPTDRPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNPLMSSKGSVLPCDVTGKIPMKCFLPGMPEFEF 807 ++ N +G+VLI R+YRDD+G N VDAFR +++ ++ PV I SFF+++ F+F+ + + +YFG E+ I+NNFVLIYELLDEI+DFGYPQN LK +ITQ+G++S +K + T QVTG +GWRREG+ Y++NE+FLD++ESVN LMS +G VL V+G++ MK +L GMPE +F Sbjct: 5 LFIYNHKGEVLIYRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHVKRSNIWLAAVTKQNVDAAMVFEFLYKMCDVMAAYFG-KISEENIKNNFVLIYELLDEILDFGYPQNSETGALKTFITQQGIKSQHQTKEEQSQI---TSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKF 214
BLAST of DY304778 vs. ExPASy Swiss-Prot
Match: AP2MA_DANRE (AP-2 complex subunit mu-1-A OS=Danio rerio GN=ap2m1a PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 8.617e-47 Identity = 94/214 (43.93%), Postives = 136/214 (63.55%), Query Frame = 1 Query: 166 IYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTCPVRQIGGCSFFYMRXXXXXXXXXXXXXXXXXXXFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPTDRPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNPLMSSKGSVLPCDVTGKIPMKCFLPGMPEFEF 807 ++ N +G+VLI+R+YRDD+G N VDAFR +++ ++ PV I SFF+++ F+F+ + + +YFG E+ I+NNFVLIYELLDEI+DFGYPQN LK +ITQ+G++ +K + T QVTG +GWRREG+ Y++NE+FLD++ESVN LMS +G VL V+G++ MK +L GMPE +F Sbjct: 5 LFIYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHVKRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMTAYFG-KISEENIKNNFVLIYELLDEILDFGYPQNSETGALKTFITQQGIKGQHQTKEEQSQI---TSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKF 214
BLAST of DY304778 vs. ExPASy Swiss-Prot
Match: AP2M1_CHICK (AP-2 complex subunit mu-1 OS=Gallus gallus GN=AP2M1 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.920e-46 Identity = 95/214 (44.39%), Postives = 135/214 (63.08%), Query Frame = 1 Query: 166 IYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTCPVRQIGGCSFFYMRXXXXXXXXXXXXXXXXXXXFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPTDRPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNPLMSSKGSVLPCDVTGKIPMKCFLPGMPEFEF 807 ++ N +G+VLI+R+YRDD+G N VDAFR +++ ++ PV I SFF+++ F+F+ + + +YFG E+ I+NNFVLIYELLDEI+DFGYPQN LK +ITQ+G++S T T QVTG +GWRREG+ Y++NE+FLD++ESVN LMS +G VL V+G++ MK +L GMPE +F Sbjct: 5 LFIYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHVKRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMTAYFG-KISEENIKNNFVLIYELLDEILDFGYPQNSETGALKTFITQQGIKSQ-----TKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKF 212
BLAST of DY304778 vs. ExPASy Swiss-Prot
Match: AP1M1_HUMAN (AP-1 complex subunit mu-1 OS=Homo sapiens GN=AP1M1 PE=1 SV=3) HSP 1 Score: 169.088 bits (427), Expect = 3.172e-41 Identity = 97/217 (44.70%), Postives = 133/217 (61.29%), Query Frame = 1 Query: 151 VAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTC-PVRQIGGCSFFYMRXXXXXXXXXXXXXXXXXXXFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPTDRPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNPLMSSKGSVLPCDVTGKIPMKCFLPGMPE 798 ++ASA+Y L+L+G VLI R YR DV + V+ F +M+ +E G P+ GG F +++ F F+ + V +F YF +E++IR+NFV+IYELLDE+MDFGYPQ +IL+ YITQEG + T P P AT VT AV WR EG+ Y+KNEVFLD++ESVN L+S+ G+VL ++ G I M+ FL GMPE Sbjct: 1 MSASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLSPILAHGGVRFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFK-ELEEESIRDNFVIIYELLDELMDFGYPQTTDSKILQEYITQEGHKLE-----TGAPRPPAT--VTNAVSWRSEGIKYRKNEVFLDVIESVNLLVSANGNVLRSEIVGSIKMRVFLSGMPE 209
BLAST of DY304778 vs. ExPASy Swiss-Prot
Match: AP1M1_BOVIN (AP-1 complex subunit mu-1 OS=Bos taurus GN=AP1M1 PE=1 SV=3) HSP 1 Score: 169.088 bits (427), Expect = 3.172e-41 Identity = 97/217 (44.70%), Postives = 133/217 (61.29%), Query Frame = 1 Query: 151 VAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTC-PVRQIGGCSFFYMRXXXXXXXXXXXXXXXXXXXFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPTDRPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNPLMSSKGSVLPCDVTGKIPMKCFLPGMPE 798 ++ASA+Y L+L+G VLI R YR DV + V+ F +M+ +E G P+ GG F +++ F F+ + V +F YF +E++IR+NFV+IYELLDE+MDFGYPQ +IL+ YITQEG + T P P AT VT AV WR EG+ Y+KNEVFLD++ESVN L+S+ G+VL ++ G I M+ FL GMPE Sbjct: 1 MSASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLSPILAHGGVRFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFK-ELEEESIRDNFVIIYELLDELMDFGYPQTTDSKILQEYITQEGHKLE-----TGAPRPPAT--VTNAVSWRSEGIKYRKNEVFLDVIESVNLLVSANGNVLRSEIVGSIKMRVFLSGMPE 209
BLAST of DY304778 vs. ExPASy Swiss-Prot
Match: AP1M1_RAT (AP-1 complex subunit mu-1 OS=Rattus norvegicus GN=Ap1m1 PE=1 SV=3) HSP 1 Score: 167.933 bits (424), Expect = 7.066e-41 Identity = 96/217 (44.24%), Postives = 133/217 (61.29%), Query Frame = 1 Query: 151 VAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTC-PVRQIGGCSFFYMRXXXXXXXXXXXXXXXXXXXFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPTDRPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNPLMSSKGSVLPCDVTGKIPMKCFLPGMPE 798 ++ASA+Y L+L+G VLI R YR DV + V+ F +M+ +E G P+ GG F +++ F F+ + V +F YF +E++IR+NFV+IYELLDE+MDFGYPQ +IL+ YITQEG + T P P AT VT AV WR EG+ Y+KNEVFLD++E+VN L+S+ G+VL ++ G I M+ FL GMPE Sbjct: 1 MSASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLSPILAHGGVRFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFK-ELEEESIRDNFVIIYELLDELMDFGYPQTTDSKILQEYITQEGHKLE-----TGAPRPPAT--VTNAVSWRSEGIKYRKNEVFLDVIEAVNLLVSANGNVLRSEIVGSIKMRVFLSGMPE 209
BLAST of DY304778 vs. ExPASy Swiss-Prot
Match: AP1M1_MOUSE (AP-1 complex subunit mu-1 OS=Mus musculus GN=Ap1m1 PE=1 SV=3) HSP 1 Score: 167.933 bits (424), Expect = 7.066e-41 Identity = 96/217 (44.24%), Postives = 133/217 (61.29%), Query Frame = 1 Query: 151 VAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTC-PVRQIGGCSFFYMRXXXXXXXXXXXXXXXXXXXFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPTDRPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNPLMSSKGSVLPCDVTGKIPMKCFLPGMPE 798 ++ASA+Y L+L+G VLI R YR DV + V+ F +M+ +E G P+ GG F +++ F F+ + V +F YF +E++IR+NFV+IYELLDE+MDFGYPQ +IL+ YITQEG + T P P AT VT AV WR EG+ Y+KNEVFLD++E+VN L+S+ G+VL ++ G I M+ FL GMPE Sbjct: 1 MSASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLSPILAHGGVRFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFK-ELEEESIRDNFVIIYELLDELMDFGYPQTTDSKILQEYITQEGHKLE-----TGAPRPPAT--VTNAVSWRSEGIKYRKNEVFLDVIEAVNLLVSANGNVLRSEIVGSIKMRVFLSGMPE 209
BLAST of DY304778 vs. ExPASy Swiss-Prot
Match: AP1M_DICDI (AP-1 complex subunit mu OS=Dictyostelium discoideum GN=apm1 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 2.056e-40 Identity = 88/216 (40.74%), Postives = 133/216 (61.57%), Query Frame = 1 Query: 151 VAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTCPVRQIGGCSFFYMRXXXXXXXXXXXXXXXXXXXFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPTDRPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNPLMSSKGSVLPCDVTGKIPMKCFLPGMPE 798 +AASAI+ ++ +G VLI+R YR DV ++ F + I++ ++L P+ Q G S+ Y++ F+ + + +F YF +E++IR+NFV+IYEL+DE+MDFGYPQ+ P+IL+ YITQEG + ++ P +TGAV WR+EG+ Y KNEVFLD+VES+N L+S+ G+VL ++ G + MK L GMPE Sbjct: 1 MAASAIFLMDSKGKVLISRNYRGDVPMSVASKFISKILEEEDLNLKPIIQEDGISYIYVKHNNLFLLATTERNANAATILLFLYKMIEVFNEYFK-ELEEESIRDNFVVIYELMDEMMDFGYPQSTEPKILQEYITQEGYKLERGARGMVLPAA-----ITGAVSWRKEGIKYNKNEVFLDVVESINLLVSANGTVLRSEIVGAVKMKSKLSGMPE 210
BLAST of DY304778 vs. ExPASy Swiss-Prot
Match: AP1M_CAEEL (AP-1 complex subunit mu-1-I OS=Caenorhabditis elegans GN=unc-101 PE=2 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 8.084e-37 Identity = 83/217 (38.25%), Postives = 127/217 (58.53%), Query Frame = 1 Query: 151 VAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTC-PVRQIGGCSFFYMRXXXXXXXXXXXXXXXXXXXFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPTDRPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNPLMSSKGSVLPCDVTGKIPMKCFLPGMPE 798 +A SA++ L+L+G +I+R YR D+ +D F +M+ +E G+ PV +F +++ F+ + V +F YF +E+++R+NFV+IYELLDE+MDFG+PQ IL+ YITQEG + + +P + VT AV WR EG+ Y+KNEVFLD++ESVN L S+ G+VL ++ G + M+ +L GMPE Sbjct: 1 MATSAMFILDLKGKTIISRNYRGDIDMTAIDKFIHLLMEKEEEGSAAPVLTYQDTNFVFIKHTNIYLVSACRSNVNVTMILSFLYKCVEVFSEYFKDV-EEESVRDNFVVIYELLDEMMDFGFPQTTESRILQEYITQEGQKLISAPRPP--------MAVTNAVSWRSEGIKYRKNEVFLDVIESVNMLASANGTVLQSEIVGSVKMRVYLTGMPE 208
BLAST of DY304778 vs. ExPASy Swiss-Prot
Match: AP1M2_BOVIN (AP-1 complex subunit mu-2 OS=Bos taurus GN=AP1M2 PE=1 SV=3) HSP 1 Score: 154.066 bits (388), Expect = 1.056e-36 Identity = 86/217 (39.63%), Postives = 129/217 (59.45%), Query Frame = 1 Query: 151 VAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTC-PVRQIGGCSFFYMRXXXXXXXXXXXXXXXXXXXFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPTDRPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNPLMSSKGSVLPCDVTGKIPMKCFLPGMPE 798 ++ASA++ L+++G LI+R Y+ DV + +D F +MQ +E G P+ G F +++ + F+ + V +F YF +E++IR+NFV++YELLDE+MDFG+PQ +IL+ YITQ+G + R P VT AV WR EG+ YKKNEVF+D++ESVN L+++ GSVL ++ G I +K FL GMPE Sbjct: 1 MSASAVFILDVKGKPLISRNYKGDVAMSEIDHFMPLLMQREEEGALTPLLSHGRVHFLWIKYSNLYLVATTLKNANASLVYSFLYKIVEVFSEYFK-ELEEESIRDNFVIVYELLDELMDFGFPQTTDSKILQEYITQQGNKLETGKS---RVPPT----VTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLSEIVGSIKLKVFLSGMPE 209 The following BLAST results are available for this feature:
BLAST of DY304778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304778 ID=DY304778; Name=DY304778; organism=Citrus clementina; type=EST; length=911bpback to top |