DY304783

Overview
NameDY304783
Unique NameDY304783
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1028
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304783 vs. ExPASy Swiss-Prot
Match: SERA_METTH (D-3-phosphoglycerate dehydrogenase OS=Methanobacterium thermoautotrophicum GN=serA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 3.103e-19
Identity = 65/226 (28.76%), Postives = 113/226 (50.00%), Query Frame = 3
Query:  273 AIFSSACAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVS-YDSRNKKPSVTY--PFYPDVCELAPKSDVLLSCCALTDQTHHLIK*AGPVGPGEKRSIISVGLAAIINEKEMVGCLLPGKIGRAGIGLVRKIPGSSGPAI 941
            AI   +   VT E++   P ++++     G++++DV     RG+ + NA    S  VA++++GL++ + RK++ AD  V++G W  N    +G +L GK +GI+G+G IGS+V  R +AFG  +  YD    K +         D+  L  +SD++     LT +T HLI         +   I++     II+E  +   L  G+I  A + +  + P    P +
Sbjct:   46 AIVVRSRTKVTREVIEAAPRLKIIARAGVGVDNVDVKAATDRGIMVINAPESTSITVAEHSIGLMLALARKIAIADRSVKEGKWEKNRF--MGIELNGKTLGIIGMGRIGSQVVVRTKAFGMDIMVYDPYISKEAAEEMGVTVTDLETLLRESDIVTIHVPLTPETRHLISEDEFKLMKDTAFIVNCARGGIIDEDALYRALKDGEIAGAALDVFEEEPPEGSPLL 269          
BLAST of DY304783 vs. ExPASy Swiss-Prot
Match: GYAR_PYRFU (Glyoxylate reductase OS=Pyrococcus furiosus GN=gyaR PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.913e-19
Identity = 70/264 (26.52%), Postives = 121/264 (45.83%), Query Frame = 3
Query:  153 SGFAMLGEQFFTSNKFRYLKAYESALPLHEFLTLHAHSVKAIFSSACAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW-----PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSYDSRNKKPSVTYPF---YPDVCELAPKSDVLLSCCALTDQTHHLIK*AGPVGPGEKRSIISVGLAAIINEKEMVGCLLPGKIGRAGIGLVRKIP 920
            +G  ML E+F        +   E  +P  + L      V A+ +     +  E+    P +R+V   + G ++IDV E  RRG+ + N  +V +   AD+A  LL+   R +   D FVR G W       + ++ LG +L GK +GIVG G IG  +A+R + F   + Y SR +K          Y  + E+  +SD ++    LT +T ++I             ++++    +++ K ++  L  G I  AG+ +  + P
Sbjct:   14 NGINMLEEEFEVE-----VWEEEREIPREKLLE-KVKDVDALVTMLSERIDQEVFENAPRLRIVANYAVGYDNIDVEEATRRGIYVTNTPDVLTNATADHAFALLLATARHVVKGDKFVRSGEWKRKGIAWHPKWFLGYELYGKTIGIVGFGRIGQAIARRAKGFNMRILYYSRTRKSQAEKELGAEYRPLEEVLKESDFVILAVPLTKETMYMINEERLKLMKPTAILVNIARGKVVDTKALIKALKEGWIAGAGLDVFEEEP 271          
BLAST of DY304783 vs. ExPASy Swiss-Prot
Match: GHRB_ERWT9 (Glyoxylate/hydroxypyruvate reductase B OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=ghrB PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 9.983e-18
Identity = 64/224 (28.57%), Postives = 110/224 (49.11%), Query Frame = 3
Query:  300 VTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW--PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYDSRNKKPSVTYPFYPDVCE---LAPKSDVLLSCCALTDQTHHLIK*AGPVGPGEKRSIISVGLAAIINEKEMVGCLLPGKIGRAGIGLVRKIPGSSGPAILPLK 953
            V AE LR  P++R+  + S G ++ DV     RGV L +   V +E VAD  + L++   R++      V+ G W   I++++  G  +  K++GI+G+G IG  +A+R    FG  + Y++R         F  + C+   L  +SD L     LT+QTHHLI             +I+ G   +++E+ ++  L  G +  AG+ +  + P      +L L+
Sbjct:   56 VDAEFLRQAPKLRVASSISVGYDNFDVAALNDRGVLLMHTPTVLTETVADTMMALVLSSARRVVEMAERVKSGEWRGSISSDW-FGIDVHHKKLGILGMGRIGLALAQRAHLGFGMPILYNARKHHDEAEQRFDAEYCDLDTLLAESDFLCISLPLTEQTHHLIGREQLAKMKRSAILINAGRGPVVDEQALIAALKDGTLHAAGLDVFEQEPLPVSSELLALR 278          
BLAST of DY304783 vs. ExPASy Swiss-Prot
Match: SERA_METJA (D-3-phosphoglycerate dehydrogenase OS=Methanocaldococcus jannaschii GN=serA PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.954e-17
Identity = 57/218 (26.15%), Postives = 107/218 (49.08%), Query Frame = 3
Query:  300 VTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGC-CVSYD---SRNKKPSVTYPFYPDVCELAPKSDVLLSCCALTDQTHHLIK*AGPVGPGEKRSIISVGLAAIINEKEMVGCLLPGKIGRAGIGLVRKIPGSSGPAI 941
            VT +++    +++++     G+++IDV     +G+ + NA +  S  VA+  +GL++   R +  A   +++G W  + +   G +L GK +G++GLG IG +V KR +AFG   + YD    +    S+      D+ EL  ++D +     LT +T H+I         +   I++     +I+EK +   L  GKI  A + +  + P    P +
Sbjct:   53 VTRDVIEKAEKLKVIGRAGVGVDNIDVEAATEKGIIVVNAPDASSISVAELTMGLMLAAARNIPQATASLKRGEW--DRKRFKGIELYGKTLGVIGLGRIGQQVVKRAKAFGMNIIGYDPYIPKEVAESMGVELVDDINELCKRADFITLHVPLTPKTRHIIGREQIALMKKNAIIVNCARGGLIDEKALYEALKEGKIRAAALDVFEEEPPKDNPLL 268          
BLAST of DY304783 vs. ExPASy Swiss-Prot
Match: TKRA_BACSU (Probable 2-ketogluconate reductase OS=Bacillus subtilis GN=yvcT PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.451e-17
Identity = 73/268 (27.24%), Postives = 121/268 (45.15%), Query Frame = 3
Query:  183 FTSNKFRYLKAYESALPLHEFLTLHAHSVKAIFSSACAP-VTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW-PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYDSRNKKPSVTYPF---YPDVCELAPKSDVLLSCCALTDQTHHLIK*AGPVGPGE----KRSIISVGLA--AIINEKEMVGCLLPGKIGRAGIGLVRKIPGSSGPAILPL 950
            F     RY    E  LP          +   + S    P +  E+L   P++++V   S G ++ D+   + RGV   +      + VAD A  L++   R+++  D FVR G W  +  E   G  +  + +GI+G+G IG + A+R +  F   V Y +R++K          Y ++  L  +SD +L    LTD+T+H+I      G  E    K S I V ++    ++EK ++  L  G I  AG+ +  K P +    +L L
Sbjct:   19 FIGEHCRYEVWQEDTLPSDVLFEKLKEAEGLLTSGTSGPSINRELLEHAPKLKVVSNQSVGYDNFDIEAMKERGVVGTHTPYTLDDTVADLAFSLILSSARRVAELDRFVRAGKWGTVEEEALFGIDVHHQTLGIIGMGRIGEQAARRAKFGFDMEVLYHNRHRKQETEDSIGVKYAELDTLLEQSDFILLITPLTDETYHMI------GEREFKLMKNSAIFVNISRGKTVDEKALIRALQEGWIRGAGLDVYEKEPVTQDNPLLQL 280          
BLAST of DY304783 vs. ExPASy Swiss-Prot
Match: GHRB_KLEP3 (Glyoxylate/hydroxypyruvate reductase B OS=Klebsiella pneumoniae (strain 342) GN=ghrB PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 4.194e-16
Identity = 62/223 (27.80%), Postives = 106/223 (47.53%), Query Frame = 3
Query:  300 VTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW--PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYDSRNKKPSVTYPF---YPDVCELAPKSDVLLSCCALTDQTHHLIK*AGPVGPGEKRSIISVGLAAIINEKEMVGCLLPGKIGRAGIGLVRKIPGSSGPAILPL 950
            V A +L  +P++R     S G ++ DV     R V L +   V +E VAD  + L++   R++      V+ G W   I  ++  GS +  K +GIVG+G IG  +A+R    FG  + Y++R + P     F   Y D+  L  ++D +     L+++THHL   A           I+ G   +++E+ ++  L  G+I  AG+ +    P +    +L L
Sbjct:   56 VDAALLEKMPKLRATSTVSVGYDNFDVEALNARRVLLMHTPTVLTETVADTVMALVLSTARRVVEVAERVKAGEWTKSIGPDW-FGSDVHHKTLGIVGMGRIGMALAQRAHFGFGMPILYNARRQHPQAEERFNARYCDLDTLLQEADFVCLILPLSEETHHLFGQAQFAKMKSSAIFINAGRGPVVDEQALIAALQAGEIHAAGLDVFEHEPLAKDSPLLTL 277          
BLAST of DY304783 vs. ExPASy Swiss-Prot
Match: SERA_ARCFU (D-3-phosphoglycerate dehydrogenase OS=Archaeoglobus fulgidus GN=serA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 7.154e-16
Identity = 72/263 (27.38%), Postives = 125/263 (47.53%), Query Frame = 3
Query:  270 KAIFSSACAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCV-SYD---SRNKKPSVTYPFYPDVCELAPKSDVLLSCCALTDQTHHLIK*AGPVGPGE----KRSIISVGLA--AIINEKEMVGCLLPGKIGRAGIGLVRKIPGSSGPAILPLKCFACTHRMPTFSLKPFREVELTVGL 1028
            +AI   +   V AE+++    ++++     G+++ID+    +RG+ + NA    +   A++A+ L++   RK+  AD  V++G W    +F +G +L GK  G++GLG +G EVAKR +A    V +YD   S+ +   +      D   L   SDV+      T +T       G +G G+    K  +I V  A   I++E  +   +  GK+  A + +  K P S    +L L     T  +   +    RE +L VG+
Sbjct:   43 EAIVVRSQTKVDAEVIQAAKNLKIIGRAGVGVDNIDINAATQRGIVVVNAPGGNTISTAEHAIALMLAAARKIPQADRSVKEGKWE-RKKF-MGIELRGKTAGVIGLGRVGFEVAKRCKALEMNVLAYDPFVSKERAEQIGVKLV-DFDTLLASSDVITVHVPRTKET------IGLIGKGQFEKMKDGVIVVNAARGGIVDEAALYEAIKAGKVAAAALDVYEKEPPSPDNPLLKLDNVVTTPHIAAST----REAQLNVGM 292          
BLAST of DY304783 vs. ExPASy Swiss-Prot
Match: GHRB_KLEP7 (Glyoxylate/hydroxypyruvate reductase B OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=ghrB PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.220e-15
Identity = 61/223 (27.35%), Postives = 106/223 (47.53%), Query Frame = 3
Query:  300 VTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW--PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYDSRNKKPSVTYPF---YPDVCELAPKSDVLLSCCALTDQTHHLIK*AGPVGPGEKRSIISVGLAAIINEKEMVGCLLPGKIGRAGIGLVRKIPGSSGPAILPL 950
            V A +L  +P++R     S G ++ DV     R V L +   V +E VAD  + L++   R++      V+ G W   I  ++  G+ +  K +GIVG+G IG  +A+R    FG  + Y++R + P     F   Y D+  L  ++D +     L+++THHL   A           I+ G   +++E+ ++  L  G+I  AG+ +    P +    +L L
Sbjct:   56 VDAALLEKMPKLRATSTVSVGYDNFDVEALNARRVLLMHTPTVLTETVADTVMALVLSTARRVVEVAERVKAGEWTKSIGPDW-FGTDVHHKTLGIVGMGRIGMALAQRAHFGFGMPILYNARRQHPQAEERFNARYCDLDTLLQEADFVCLILPLSEETHHLFGQAQFAKMKSSAIFINAGRGPVVDEQALIAALQNGEIHAAGLDVFEHEPLAKDSPLLSL 277          
BLAST of DY304783 vs. ExPASy Swiss-Prot
Match: SERA_BACSU (D-3-phosphoglycerate dehydrogenase OS=Bacillus subtilis GN=serA PE=3 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 1.594e-15
Identity = 61/226 (26.99%), Postives = 107/226 (47.35%), Query Frame = 3
Query:  261 HSVKAIFSSACAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSY------DSRNKKPSVTYPFYPDVCELAPKSDVLLSCCALTDQTHHLIK*AGPVGPGEKRSIISVGLAAIINEKEMVGCLLPGKIGRAGIGLVRKIP 920
            H+  A+   +   VT ++   +  +++V     G+++ID+ E  + GV + NA N  +   A++   ++  ++R +  A+  V+   W  N    +GS+L GK +GIVGLG IGSE+A+R  AFG  V        + R KK  V    + +V E A   D++     LT +T  L+         +   +I+     II+E  ++  L  G +  A + +    P
Sbjct:   39 HTFDALLVRSATKVTEDLFNKMTSLKIVGRAGVGVDNIDIDEATKHGVIVINAPNGNTISTAEHTFAMISSLMRHIPQANISVKSREW--NRTAYVGSELYGKTLGIVGLGRIGSEIAQRARAFGMTVHVFDPFLTEERAKKIGVNSRTFEEVLESA---DIITVHTPLTKETKGLLNKETIAKTKKGVRLINCARGGIIDEAALLEALENGHVAGAALDVFEVEP 259          
BLAST of DY304783 vs. ExPASy Swiss-Prot
Match: GRHPR_HUMAN (Glyoxylate reductase/hydroxypyruvate reductase OS=Homo sapiens GN=GRHPR PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.594e-15
Identity = 62/219 (28.31%), Postives = 103/219 (47.03%), Query Frame = 3
Query:  333 VRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPINAEFPL-GSKLGGKRVGIVGLGSIGSEVAKRLEAFGC-CVSYDSRNKKPSVTYPF---YPDVCELAPKSDVLLSCCALTDQTHHLIK*AGPVGPGEKRSIISVGLAAIINEKEMVGCLLPGKIGRAGIGLVRKIPGSSGPAILPLK-CFACTH 971
            ++++   S G++H+ + E ++RG+ +    +V ++  A+ A+ LL+   R+L  A   V+ G W       L G  L    VGI+GLG IG  +A+RL+ FG     Y  R  +P     F   +    ELA +SD ++  C+LT  T  L          E    I++    ++N+ ++   L  GKI  AG+ +    P  +   +L LK C    H
Sbjct:   75 LKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPH 293          
The following BLAST results are available for this feature:
BLAST of DY304783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
SERA_METTH3.103e-1928.76D-3-phosphoglycerate dehydrogenase OS=Methanobacte... [more]
GYAR_PYRFU6.913e-1926.52Glyoxylate reductase OS=Pyrococcus furiosus GN=gya... [more]
GHRB_ERWT99.983e-1828.57Glyoxylate/hydroxypyruvate reductase B OS=Erwinia ... [more]
SERA_METJA4.954e-1726.15D-3-phosphoglycerate dehydrogenase OS=Methanocaldo... [more]
TKRA_BACSU8.451e-1727.24Probable 2-ketogluconate reductase OS=Bacillus sub... [more]
GHRB_KLEP34.194e-1627.80Glyoxylate/hydroxypyruvate reductase B OS=Klebsiel... [more]
SERA_ARCFU7.154e-1627.38D-3-phosphoglycerate dehydrogenase OS=Archaeoglobu... [more]
GHRB_KLEP71.220e-1527.35Glyoxylate/hydroxypyruvate reductase B OS=Klebsiel... [more]
SERA_BACSU1.594e-1526.99D-3-phosphoglycerate dehydrogenase OS=Bacillus sub... [more]
GRHPR_HUMAN1.594e-1528.31Glyoxylate reductase/hydroxypyruvate reductase OS=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ9YL05RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304783 ID=DY304783; Name=DY304783; organism=Citrus clementina; type=EST; length=1028bp
GGGCAGGTGGTAGATGACTATAGACATGTGTGTAAAAAGAGCGCGGTGGC
AGCGGCCGGGATCTCGGGGGATACAAGAAGTTAACGCGACACAAGGCAAG
TGGCATCACTTCGCAATCCAATTCCCAGCAAGTGCTACTCTTAAGAAAAC
CATCAGGCTTCGCTATGTTAGGAGAACAGTTCTTTACCTCAAACAAATTC
CGATACTTGAAAGCATACGAATCAGCGCTTCCTCTACACGAATTCTTGAC
GCTACACGCGCACTCAGTGAAGGCCATCTTCTCCAGCGCATGTGCGCCGG
TTACAGCCGAAATCCTCCGCCTGCTTCCAGAGGTGCGGCTGGTGGTTGCC
ACAAGCGCCGGCCTTAACCATATTGACGTAGTAGAGTGCCGCCGCCGCGG
TGTGGCTCTGGCCAATGCTGGTAACGTTTTCTCTGAAGACGTGGCTGATT
ACGCGCTGGGCTTGCTAATTGATGTCCTGAGAAAACTTTCTGCTGCCGAT
TGCTTTGTCAGACAAGGGCTTTGGCCTATCAACGCTGAATTTCCGCTTGG
GTCTAAGTTGGGTGGCAAACGAGTTGGGATTGTTGGGCTGGGGAGCATTG
GGTCTGAAGTTGCCAAAAGGCTTGAAGCTTTCGGCTGCTGCGTTTCATAC
GACTCTAGGAATAAAAAGCCTTCTGTTACGTACCCTTTCTATCCGGATGT
CTGTGAACTTGCACCTAAGAGTGATGTCCTCCTCAGTTGCTGTGCATTGA
CTGATCAAACACATCACTTGATCAAATAAGCAGGTCCTGTTGGCCCTGGG
GAAAAAAGGAGTATTATTAGTGTAGGGCTTGCTGCCATTATTAATGAAAA
AGAAATGGTGGGGTGTTTGCTGCCAGGAAAAATTGGAAGGGCCGGGATCG
GACTTGTTCGAAAGATACCCGGAAGTTCCGGACCCGCCATTTTGCCTTTA
AAATGTTTTGCATGTACCCACAGGATGCCGACTTTTTCCCTCAAACCTTT
TAGGGAGGTGGAGTTAACTGTGGGGTTG
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