DY304814
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304814 vs. ExPASy Swiss-Prot
Match: CELF3_DANRE (CUG-BP- and ETR-3-like factor 3 OS=Danio rerio GN=tnrc4 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 1.104e-12 Identity = 46/144 (31.94%), Postives = 86/144 (59.72%), Query Frame = 2 Query: 110 EVFIGGLPKDASEEDLRDLCEPIGDVFEVRLMKDKESGESKGFAFVSFRSKEFAKKAIDELH-SKELKG--KTIRCSLSETKNR----LFIGNVPKNWTEDEFRKVIEDVGPGVETIELIKDPQNPSRNRGFSFALYYNNACAE 520 ++FIG +P++ E+DL+ + E G ++E+ ++KDK +G KG AF+++ ++E A KA + LH K L G + I+ ++++ R LF+G + K ++ + RK+ E G +E +++ P S +G +F Y +NA A+ Sbjct: 8 KLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNALHEQKTLPGMNRPIQVKPADSEGRGDRKLFVGMLGKQLSDADVRKMFEPFG-SIEECTVLRGPDGAS--KGCAFVKYQSNAEAQ 148
BLAST of DY304814 vs. ExPASy Swiss-Prot
Match: CELF4_MACFA (CUG-BP- and ETR-3-like factor 4 OS=Macaca fascicularis GN=BRUNOL4 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.442e-12 Identity = 46/144 (31.94%), Postives = 86/144 (59.72%), Query Frame = 2 Query: 110 EVFIGGLPKDASEEDLRDLCEPIGDVFEVRLMKDKESGESKGFAFVSFRSKEFAKKAIDELH-SKELKG--KTIRCSLSETKNR----LFIGNVPKNWTEDEFRKVIEDVGPGVETIELIKDPQNPSRNRGFSFALYYNNACAE 520 ++FIG +P++ E+DL+ L E G ++E+ ++KD+ +G KG AF+++ +E A KA LH K L G + I+ +++++R LF+G + K +ED+ R++ E G +E +++ P S +G +F Y ++A A+ Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGDRKLFVGMLNKQQSEDDVRRLFEAFG-NIEECTILRGPDGNS--KGCAFVKYSSHAEAQ 195
BLAST of DY304814 vs. ExPASy Swiss-Prot
Match: PABP_CRYNE (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Cryptococcus neoformans GN=PAB1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.459e-12 Identity = 46/170 (27.06%), Postives = 82/170 (48.24%), Query Frame = 2 Query: 62 EKDKHAQLLALPPNGSEVFIGGLPKDASEEDLRDLCEPIGDVFEVRLMKDKESGESKGFAFVSFRSKEFAKKAIDELHSKELKGKTIRCSLSETKN------------------------RLFIGNVPKNWTEDEFRKVIEDVGPGVETIELIKDPQNPSRNRGFSFALY 499 +K++ +++ L + V+I + + ++ + DL +P G V L +D E G SKGF FV++ + E A+KA+DEL+ KE+ GK + ++TK+ L++ N+ W +D R E G + + ++++D S RGF F Y Sbjct: 212 KKERLSKVEELRAQFTNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRD-EKGVSKGFGFVNYENHESARKAVDELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYVKNLDDEWDDDRLRAEFEAFGT-ITSSKVMRDDSGVS--RGFGFVCY 377
BLAST of DY304814 vs. ExPASy Swiss-Prot
Match: DND1_XENLA (Dead end protein homolog 1 OS=Xenopus laevis GN=dnd1 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 3.212e-12 Identity = 46/127 (36.22%), Postives = 72/127 (56.69%), Query Frame = 2 Query: 95 PPNGSEVFIGGLPKDASEEDLRDLCEPIGDVFEVRLMKDKESGESKGFAFVSFRSKEFAKKAIDELHSKEL-KGKTIRCSLSETKNRLFIGNVPKNWTEDEFRKVIEDVGPGVETIELIKDPQNPSR 472 P +GSEVFIG +P+D E+ L L + +G ++E RLM SG ++GFA+ + S+ A AI L+ E+ KG I S K+ L + +P N+ E+ + V+++V GV +I L P S+ Sbjct: 73 PVSGSEVFIGKIPQDIYEDKLIPLFQSVGKLYEFRLMM-TFSGLNRGFAYARYISRRQAISAIMSLNGFEITKGCCIVVCRSTEKSELALDGLPGNFDENMLKNVLDEVTSGVSSISLHPSPTKESQ 198
BLAST of DY304814 vs. ExPASy Swiss-Prot
Match: FCA_ARATH (Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.195e-12 Identity = 46/136 (33.82%), Postives = 77/136 (56.62%), Query Frame = 2 Query: 110 EVFIGGLPKDASEEDLRDLCEPIGDVFEVRLMKDKESGESKGFAFVSFRSKEFAKKAIDELHSK-ELKGKT----IRCSLSETKN------RLFIGNVPKNWTEDEFRKVIEDVGPGVETIELIKDPQNPSRNRGF 484 ++F+G +P+ A+EE++R E G+V EV L+KDK +G+ +G FV + + + A +AI LH++ L G T +R + E + +LF+G++ K TE E ++ G VE + L++D SR GF Sbjct: 121 KLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFG-HVEDVYLMRDEYRQSRGCGF 255
BLAST of DY304814 vs. ExPASy Swiss-Prot
Match: CELF3_MOUSE (CUG-BP- and ETR-3-like factor 3 OS=Mus musculus GN=Tnrc4 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.195e-12 Identity = 44/148 (29.73%), Postives = 87/148 (58.78%), Query Frame = 2 Query: 98 PNGSEVFIGGLPKDASEEDLRDLCEPIGDVFEVRLMKDKESGESKGFAFVSFRSKEFAKKAIDELH-SKELKG--KTIRCSLSETKNR----LFIGNVPKNWTEDEFRKVIEDVGPGVETIELIKDPQNPSRNRGFSFALYYNNACAE 520 P+ ++F+G +P+ E+DL+ + E G +FE+ ++KDK +G KG AF+++ +++ A KA LH K L G + I+ +++++R LF+G + K T+++ RK+ E G ++ +++ P S +G +F + +A A+ Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGDRKLFVGMLGKQQTDEDVRKMFEPFGT-IDECTVLRGPDGTS--KGCAFVKFQTHAEAQ 148
BLAST of DY304814 vs. ExPASy Swiss-Prot
Match: PABP_COCIM (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Coccidioides immitis GN=PAB1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.479e-12 Identity = 38/118 (32.20%), Postives = 67/118 (56.78%), Query Frame = 2 Query: 62 EKDKHAQLLALPPNGSEVFIGGLPKDASEEDLRDLCEPIGDVFEVRLMKDKESGESKGFAFVSFRSKEFAKKAIDELHSKELKGKTIRCSLSETKNRLFIGNV-PKNWTEDEFRKVIE 412 +KD+ ++ + N + V++ + +D +EE+ RDL E G++ L +D ESG+S+GF FV+F S + A A++ L+ K+ KG+ +L++G K+ E+E RK E Sbjct: 221 KKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQ-----------KLYVGRAQKKHEREEELRKQYE 327
BLAST of DY304814 vs. ExPASy Swiss-Prot
Match: HNRPD_RAT (Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus GN=Hnrnpd PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.479e-12 Identity = 53/170 (31.18%), Postives = 83/170 (48.82%), Query Frame = 2 Query: 26 EEEKPTASVGEDEKD------KHAQLLALPPNGSEVFIGGLPKDASEEDLRDLCEPIGDVFEVRLMKDKESGESKGFAFVSFRSKEFAKKAIDELHSKELKGKTI---RCSLSETK---NRLFIGNVPKNWTEDEFRKVIEDVGPGVETIELIKDPQNPSRNRGFSFALY 499 E K AS E+++ +H + ++FIGGL D +++DL+D GDV + L D +G S+GF FV F+ E K +D+ K L GK I R +TK ++F+G + + E++ R+ G VE+IEL D ++ RGF F + Sbjct: 62 EGAKIDASKNEEDEGHSNSSPRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHK-LNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGE-VESIELPMD-NKTNKRRGFCFITF 228
BLAST of DY304814 vs. ExPASy Swiss-Prot
Match: HNRPD_MOUSE (Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus GN=Hnrnpd PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 5.479e-12 Identity = 53/170 (31.18%), Postives = 84/170 (49.41%), Query Frame = 2 Query: 26 EEEKPTASVGEDEKD------KHAQLLALPPNGSEVFIGGLPKDASEEDLRDLCEPIGDVFEVRLMKDKESGESKGFAFVSFRSKEFAKKAIDELHSKELKGKTI---RCSLSETK---NRLFIGNVPKNWTEDEFRKVIEDVGPGVETIELIKDPQNPSRNRGFSFALY 499 E K AS E+++ +H + A ++FIGGL D +++DL+D G+V + L D +G S+GF FV F+ E K +D+ K L GK I R +TK ++F+G + + E++ R+ G VE+IEL D ++ RGF F + Sbjct: 64 EGAKIDASKNEEDEGHSNSSPRHTEAAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHK-LNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGE-VESIELPMD-NKTNKRRGFCFITF 230
BLAST of DY304814 vs. ExPASy Swiss-Prot
Match: DND1_HUMAN (Dead end protein homolog 1 OS=Homo sapiens GN=DND1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.479e-12 Identity = 43/122 (35.25%), Postives = 65/122 (53.28%), Query Frame = 2 Query: 95 PPNGSEVFIGGLPKDASEEDLRDLCEPIGDVFEVRLMKDKESGESKGFAFVSFRSKEFAKKAIDELHSKELKGK-TIRCSLSETKNRLFIGNVPKNWTEDEFRKVIEDVGPGVETIELIKDP 457 PP GSEVFIG LP+D E L L + +G ++E RLM SG ++GFA+ + S+ A+ AI LH+ L+ + S K L + +P N T ++ +GPG++ L+ P Sbjct: 54 PPAGSEVFIGRLPQDVYEHQLIPLFQRVGRLYEFRLMM-TFSGLNRGFAYARYSSRRGAQAAIATLHNHPLRPSCPLLVCRSTEKCELSVDGLPPNLTRSALLLALQPLGPGLQEARLLPSP 174 The following BLAST results are available for this feature:
BLAST of DY304814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304814 ID=DY304814; Name=DY304814; organism=Citrus clementina; type=EST; length=938bpback to top |