DY304843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304843 vs. ExPASy Swiss-Prot
Match: FUMC_SALTI (Fumarate hydratase class II OS=Salmonella typhi GN=fumC PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 6.862e-46 Identity = 99/169 (58.58%), Postives = 118/169 (69.82%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPAI-GKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRG-EKIVHPNDHVNRSQSSNDTFPTVMHIAAAMGTNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATP 501 RSL++F I E+MP ++ A + K+ AAKVN + GL A AI++AA EV GK D FPL +WQTGSGTQSNMN NEV+ANRA+EILG RG E+ VHPND VN+SQSSND FPT MH+AA + LIP L L ++L KS F DIVKIGRTH QDATP Sbjct: 28 RSLEHFRIS--TEKMPVSLIHALALTKRAAAKVNQDLGLLAAEKASAIIEAADEVLAGKHADEFPLAIWQTGSGTQSNMNMNEVLANRASEILGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALREHLIPQLSALTDTLRDKSHAFADIVKIGRTHLQDATP 194
BLAST of DY304843 vs. ExPASy Swiss-Prot
Match: FUMC_ECOL6 (Fumarate hydratase class II OS=Escherichia coli O6 GN=fumC PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 6.862e-46 Identity = 98/169 (57.99%), Postives = 118/169 (69.82%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGL-DPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRG-EKIVHPNDHVNRSQSSNDTFPTVMHIAAAMGTNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATP 501 RSL++F I E+MP ++ A + K+ AAKVN + GL AI QAA EV G+ +D FPL +WQTGSGTQSNMN NEV+ANRA+E+LG RG E+ VHPND VN+SQSSND FPT MH+AA + +LIP LK L +L KS F DIVKIGRTH QDATP Sbjct: 28 RSLEHFRIS--TEKMPTSLIHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQLIPQLKTLTQTLSEKSRAFADIVKIGRTHLQDATP 194
BLAST of DY304843 vs. ExPASy Swiss-Prot
Match: FUMC_ECO57 (Fumarate hydratase class II OS=Escherichia coli O157:H7 GN=fumC PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 6.862e-46 Identity = 98/169 (57.99%), Postives = 118/169 (69.82%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGL-DPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRG-EKIVHPNDHVNRSQSSNDTFPTVMHIAAAMGTNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATP 501 RSL++F I E+MP ++ A + K+ AAKVN + GL AI QAA EV G+ +D FPL +WQTGSGTQSNMN NEV+ANRA+E+LG RG E+ VHPND VN+SQSSND FPT MH+AA + +LIP LK L +L KS F DIVKIGRTH QDATP Sbjct: 28 RSLEHFRIS--TEKMPTSLIHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQLIPQLKTLTQTLSEKSRAFADIVKIGRTHLQDATP 194
BLAST of DY304843 vs. ExPASy Swiss-Prot
Match: FUMC2_PSEAE (Fumarate hydratase class II 2 OS=Pseudomonas aeruginosa GN=fumC2 PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.170e-45 Identity = 95/169 (56.21%), Postives = 118/169 (69.82%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMGTNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATP 501 RSL+NF IGG+R MP ++ A ++KK AA+VN G L P + + I QAA EV G+ ++HFPLVVWQTGSGTQ+NMN NEVIA RA E+ G+ RG K VHPNDHVNR+QSSND+FPT MHIAAA + +L+P + L L +S +VK GRTH DATP Sbjct: 26 RSLENFAIGGQR--MPLAVIHALALIKKAAARVNDHLGELPPEVARLIEQAADEVLAGRHDEHFPLVVWQTGSGTQTNMNVNEVIAGRANELAGNPRGGKSPVHPNDHVNRAQSSNDSFPTAMHIAAAKAVHEQLLPAIAELSGGLAEQSARHASLVKTGRTHLMDATP 192
BLAST of DY304843 vs. ExPASy Swiss-Prot
Match: FUMC_BACHD (Fumarate hydratase class II OS=Bacillus halodurans GN=fumC PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.529e-45 Identity = 97/181 (53.59%), Postives = 119/181 (65.75%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMGTNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATP------FDSWARI 522 RS +NF IG E+MP I+ AF +LKK AA VN + G L AI AA EV GK +DHFPL VWQTGSGTQSNMN NEV+A R ++L K + +HPND VNRSQSSNDTFPT MHIAA + L+P L++ +LH K+ +F D++K+GRTH QDATP WAR+ Sbjct: 27 RSYENFHIG--TEKMPMEIIYAFALLKKAAANVNKKLGQLSAEKADAITWAANEVLAGKHDDHFPLFVWQTGSGTQSNMNMNEVLARRGNQLLQEKGLDVTIHPNDDVNRSQSSNDTFPTAMHIAAYNKLDDHLLPTLQMFKQTLHQKAKQFDDVIKLGRTHLQDATPLTLGQEISGWARM 205
BLAST of DY304843 vs. ExPASy Swiss-Prot
Match: FUMC_SHIFL (Fumarate hydratase class II OS=Shigella flexneri GN=fumC PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 4.448e-45 Identity = 97/169 (57.40%), Postives = 117/169 (69.23%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGL-DPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRG-EKIVHPNDHVNRSQSSNDTFPTVMHIAAAMGTNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATP 501 RSL++F I E+MP ++ A + K+ AAKVN + L AI QAA EV G+ +D FPL +WQTGSGTQSNMN NEV+ANRA+E+LG RG E+ VHPND VN+SQSSND FPT MH+AA + +LIP LK L +L KS F DIVKIGRTH QDATP Sbjct: 28 RSLEHFRIS--TEKMPTSLIHALALTKRAAAKVNEDLDLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQLIPQLKTLTQTLSEKSRAFADIVKIGRTHLQDATP 194
BLAST of DY304843 vs. ExPASy Swiss-Prot
Match: FUMC_WIGBR (Fumarate hydratase class II OS=Wigglesworthia glossinidia brevipalpis GN=fumC PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 7.587e-45 Identity = 93/169 (55.03%), Postives = 119/169 (70.41%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGL-DPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIAAAMGTNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATP 501 RS+ NF+I E+MP ++ A +K AAKVN + L + AI++A++E+ GK D FPLV+WQTGSGTQ+NMN NEVIAN A ++LG K G+ I+HPNDHVN+SQSSND FPT MHI+A + L+PNL L S + KS+ FKDI+KIGRTH QDATP Sbjct: 28 RSIYNFNIS--TEKMPYELIHALVQIKLVAAKVNKDLKLLEEKKADAIIKASEEILSGKYKDSFPLVIWQTGSGTQTNMNVNEVIANIAIKLLGGKYGDYSIIHPNDHVNKSQSSNDVFPTAMHISAVLSLKKNLLPNLIKLKKSFYDKSILFKDIIKIGRTHLQDATP 194
BLAST of DY304843 vs. ExPASy Swiss-Prot
Match: FUMC_CAMJE (Fumarate hydratase class II OS=Campylobacter jejuni GN=fumC PE=1 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.294e-44 Identity = 99/169 (58.58%), Postives = 115/169 (68.05%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHK-RGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMGTNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATP 501 RS +NF IG E+ MP+ ++ AF LKK A VN + G LD A AI+QA E+ GK +D+FPL +WQTGSGTQSNMN NEVIANRA EI+G R EK+VHPNDHVN SQSSNDTFPT M I A +LIP L L + K EF I+KIGRTH QDATP Sbjct: 27 RSFENFKIGCEK--MPKVLIYAFANLKKSLALVNNKLGKLDDAKKNAIVQACDEIIAGKFDDNFPLAIWQTGSGTQSNMNMNEVIANRATEIMGGDFRKEKLVHPNDHVNMSQSSNDTFPTAMSIVAVEQVEKKLIPALDELIATFEKKVKEFDGIIKIGRTHLQDATP 193
BLAST of DY304843 vs. ExPASy Swiss-Prot
Match: FUMC_SYNY3 (Fumarate hydratase class II OS=Synechocystis sp. (strain PCC 6803) GN=fumC PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.207e-44 Identity = 97/169 (57.40%), Postives = 116/169 (68.64%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPAI-GKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMGTNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATP 501 RSL FDIG + MP ++RAF ILKK AA N + G PA + I+ AA E+ G+ DHFPL +WQTGSGTQ+NMN NEVIANRA I G + G K +HPNDHVN SQSSNDTFPT MHIAA G ++LIP+L+ L +SL+ K+ F I KIGRTH DA P Sbjct: 29 RSLMFFDIGSDV--MPPDLIRAFAILKKAAAITNQDLGKLPADKAELIITAADEIIAGQWLDHFPLRIWQTGSGTQTNMNVNEVIANRAIAICGGELGSKNPIHPNDHVNMSQSSNDTFPTAMHIAAVAGLQTKLIPSLQALRDSLNEKAECFAGITKIGRTHLMDAVP 195
BLAST of DY304843 vs. ExPASy Swiss-Prot
Match: FUMC_RICPR (Fumarate hydratase class II OS=Rickettsia prowazekii GN=fumC PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.207e-44 Identity = 95/169 (56.21%), Postives = 119/169 (70.41%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMGTNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATP 501 RSL NF I +++MP+ ++RA ILKKCAA+VN E+G L+ I +I +A + G+ D+FPLVVWQTGSGTQ+NMN NEVIA+ A E L K+G K VHPNDHVN+ QSSND+FPT MHIA + T +LIP L L L KS ++ I+KIGRTH QDATP Sbjct: 28 RSLNNFKIS--KQKMPKILIRALAILKKCAAQVNYEFGDLEYKIATSIDKAIDRILAGEFEDNFPLVVWQTGSGTQTNMNMNEVIASIANEELTGKKGGKFPVHPNDHVNKGQSSNDSFPTAMHIATVLATKQQLIPALNNLLTYLQDKSKDWDKIIKIGRTHLQDATP 194 The following BLAST results are available for this feature:
BLAST of DY304843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304843 ID=DY304843; Name=DY304843; organism=Citrus clementina; type=EST; length=563bpback to top |