DY304843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304843 vs. ExPASy Swiss-Prot
Match: FUMC_STAAS (Fumarate hydratase class II OS=Staphylococcus aureus (strain MSSA476) GN=fumC PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.134e-40 Identity = 87/168 (51.79%), Postives = 113/168 (67.26%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMGTNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATP 501 RS +NF +G +ERMP +V F LK+ AA N + G L A AI+ A ++ G+L++HFPLVVWQTGSGTQSNMN NEV++ A L + ++ +HPND VN+SQSSNDTFPT MH+A ++L P LK+L N+L K +F I+KIGRTH QDATP Sbjct: 27 RSKRNFPVG--KERMPIEVVYGFAQLKRAAALANFDLGKLSEAKKDAIVYACDQILSGELDEHFPLVVWQTGSGTQSNMNVNEVVSYVANMYLKDHQIDESIHPNDDVNKSQSSNDTFPTAMHVALYQEVETKLEPALKLLRNTLKEKEDKFDSIIKIGRTHLQDATP 192
BLAST of DY304843 vs. ExPASy Swiss-Prot
Match: FUMC_STAAN (Fumarate hydratase class II OS=Staphylococcus aureus (strain N315) GN=fumC PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.134e-40 Identity = 87/168 (51.79%), Postives = 113/168 (67.26%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMGTNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATP 501 RS +NF +G +ERMP +V F LK+ AA N + G L A AI+ A ++ G+L++HFPLVVWQTGSGTQSNMN NEV++ A L + ++ +HPND VN SQSSNDTFPT MH+A ++L P LK+L N+L K +F+ I+KIGRTH QDATP Sbjct: 27 RSKRNFPVG--KERMPIEVVYGFAQLKRAAALANFDLGKLSEAKKDAIVYACDQILSGELDEHFPLVVWQTGSGTQSNMNVNEVVSYVANMYLKDHQIDESIHPNDDVNESQSSNDTFPTAMHVALYQEVETKLEPALKLLRNTLKEKEDKFESIIKIGRTHLQDATP 192
BLAST of DY304843 vs. ExPASy Swiss-Prot
Match: FUMC_STAAM (Fumarate hydratase class II OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fumC PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.134e-40 Identity = 87/168 (51.79%), Postives = 113/168 (67.26%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMGTNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATP 501 RS +NF +G +ERMP +V F LK+ AA N + G L A AI+ A ++ G+L++HFPLVVWQTGSGTQSNMN NEV++ A L + ++ +HPND VN SQSSNDTFPT MH+A ++L P LK+L N+L K +F+ I+KIGRTH QDATP Sbjct: 27 RSKRNFPVG--KERMPIEVVYGFAQLKRAAALANFDLGKLSEAKKDAIVYACDQILSGELDEHFPLVVWQTGSGTQSNMNVNEVVSYVANMYLKDHQIDESIHPNDDVNESQSSNDTFPTAMHVALYQEVETKLEPALKLLRNTLKEKEDKFESIIKIGRTHLQDATP 192
BLAST of DY304843 vs. ExPASy Swiss-Prot
Match: FUMC_BLOFL (Fumarate hydratase class II OS=Blochmannia floridanus GN=fumC PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.481e-40 Identity = 85/167 (50.90%), Postives = 116/167 (69.46%), Query Frame = 1 Query: 4 SLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGL-DPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMGTNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATP 501 SL+ F+I E+MP +++A +K+ +A+VN + L D +AI+ A E+ G + FPL VWQTGSGTQSNMN NEV+ANRA E+L + +VHPNDHVN+SQSSND FP+ MHIAA + ++LIP +K+L + KS+EF++I+KIGRTH QDA P Sbjct: 14 SLKFFNIS--TEKMPWELIKALAQIKRVSAQVNYDLKLLDYERSQAIIAAVDEILSGNHKNEFPLSVWQTGSGTQSNMNMNEVLANRANELLRKNQINIVVHPNDHVNKSQSSNDVFPSAMHIAAVVNLKTKLIPVIKLLQKTFLKKSIEFRNIIKIGRTHLQDAIP 178
BLAST of DY304843 vs. ExPASy Swiss-Prot
Match: FUMC_SYNPX (Fumarate hydratase class II OS=Synechococcus sp. (strain WH8102) GN=fumC PE=3 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 4.308e-40 Identity = 86/170 (50.59%), Postives = 115/170 (67.65%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGL--DPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIAAAMGTNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATP 501 RSL NF IG +++P ++ A +K+C A VN +GL D + I +A Q + G+ +DHFPL VWQTGSGTQ+NMN NEVI+N AA+ G G + +HPNDH+NRSQS+ND FP +H+AAA+ L+P LK L SL +K+V ++DI+KIGRTH QDA P Sbjct: 29 RSLNNFAIG--HQKIPAELIHALARIKQCCAAVNGRHGLLNDQQVA-LIERAGQAIQTGQQDDHFPLSVWQTGSGTQTNMNVNEVISNLAAQESGENLGSHRPLHPNDHINRSQSTNDVFPAAIHVAAALQLQQELLPELKRLIASLDAKAVAWQDIIKIGRTHLQDAVP 195
BLAST of DY304843 vs. ExPASy Swiss-Prot
Match: FUMC_HAEDU (Fumarate hydratase class II OS=Haemophilus ducreyi GN=fumC PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 9.597e-40 Identity = 94/169 (55.62%), Postives = 105/169 (62.13%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEK-IVHPNDHVNRSQSSNDTFPTVMHIAAAMGTNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATP 501 RS NF IG E MP I+ AF LKK AA N E G L I E+ KL D FPLV+WQTGSGTQSNMN NEVIANRA + G GEK I+HPND VN+SQSSNDT+PT MHIAA IP ++ L + KS FKD+VKIGRTH DATP Sbjct: 27 RSRNNFRIGPEAS-MPVEIIEAFAYLKKAAAFANAELGALTTEKRDLIAMVCDEILANKLADEFPLVIWQTGSGTQSNMNLNEVIANRAHVLQGGALGEKSIIHPNDDVNKSQSSNDTYPTAMHIAAYKKVVEVTIPAIERLQKTFAIKSEAFKDVVKIGRTHLMDATP 194
BLAST of DY304843 vs. ExPASy Swiss-Prot
Match: FUMC_HALSA (Fumarate hydratase class II OS=Halobacterium salinarium GN=fumC PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.138e-39 Identity = 87/168 (51.79%), Postives = 111/168 (66.07%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGL-DPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMGTNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATP 501 R+++NF I G VRA G++KK AA+ N + GL D AI+ AA EV G+ +D FP+ V+QTGSGT SNMNANEVIANRAAE+LG + G+++VHPNDHVN QSSND PT MH+A+ + + P L+ L L K+ F +VK GRTH QDATP Sbjct: 29 RAIENFPISGIA--FGRRFVRALGVVKKAAAQANRDLGLVDDERADAIVAAADEVIAGEHDDQFPVDVFQTGSGTSSNMNANEVIANRAAELLGEEIGDRVVHPNDHVNYGQSSNDVIPTAMHVASLDALVNDVKPGLETLAAELDDKADAFDGVVKTGRTHLQDATP 194
BLAST of DY304843 vs. ExPASy Swiss-Prot
Match: FUMC_STRAW (Fumarate hydratase class II OS=Streptomyces avermitilis GN=fumC PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 3.647e-39 Identity = 90/168 (53.57%), Postives = 111/168 (66.07%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMGTNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATP 501 R+++NF I G+R + + A +K AAKVN E G LD + +AI +AA EVAEG+ ++HFP+ V+QTGSGT SNMNANEVIA A E LG VHPNDHVN SQSSND FP+ +HIAA L+P L+ L +L KS EF D+VK GRTH DATP Sbjct: 34 RAVENFPISGQR--LERAHIEALARIKGAAAKVNAELGVLDKDVAEAIQEAAAEVAEGRWDEHFPVDVFQTGSGTSSNMNANEVIATLATERLGRD-----VHPNDHVNASQSSNDVFPSSIHIAATAAVTRDLVPALEHLAAALGRKSEEFADVVKAGRTHLMDATP 194
BLAST of DY304843 vs. ExPASy Swiss-Prot
Match: FUMC_CHLTR (Fumarate hydratase class II OS=Chlamydia trachomatis GN=fumC PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 6.221e-39 Identity = 89/169 (52.66%), Postives = 108/169 (63.91%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMGTNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATP 501 RS + F G +E MP I+ A +KKCAAK N + G LD I+ A E+ G+ ++HFPL VWQTGSGTQSNMN NEVIAN A + G + G K VHPNDHVN+SQSSND FPT MHIAA LIP L+ L + +K++EF +KIGRTH DA P Sbjct: 25 RSQEFFSYG--KESMPLEIIHALVKIKKCAAKANGDLGCLDAKRRDMIVAATDEILSGEFDEHFPLKVWQTGSGTQSNMNVNEVIANLAIQRHGGELGSKHPVHPNDHVNKSQSSNDVFPTAMHIAAVQSIKGSLIPALEHLKKVIDAKALEFARDIKIGRTHLMDAVP 191
BLAST of DY304843 vs. ExPASy Swiss-Prot
Match: FUMC_CHLMU (Fumarate hydratase class II OS=Chlamydia muridarum GN=fumC PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.810e-38 Identity = 89/169 (52.66%), Postives = 108/169 (63.91%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMGTNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATP 501 RS F G +E MP +++A +KKCAAK N + LD I+ A+ E+ G L +HFPL VWQTGSGTQSNMN NEVIAN A + G + G K VHPNDHVN+SQSSND FPT MHIAA LIP L+ L +L +K++EF +KIGRTH DA P Sbjct: 25 RSKNFFSYG--KELMPIEVIQALVKIKKCAAKANGDLQCLDAKRRDMIVAASDEILSGGLEEHFPLKVWQTGSGTQSNMNVNEVIANLAIKRHGGELGSKNPVHPNDHVNKSQSSNDVFPTAMHIAAVQSIKGSLIPALEHLQKNLDAKALEFSRDIKIGRTHLMDAVP 191 The following BLAST results are available for this feature:
BLAST of DY304843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304843 ID=DY304843; Name=DY304843; organism=Citrus clementina; type=EST; length=563bpback to top |