DY304885

Overview
NameDY304885
Unique NameDY304885
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1224
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304885 vs. ExPASy Swiss-Prot
Match: TNI3K_HUMAN (Serine/threonine-protein kinase TNNI3K OS=Homo sapiens GN=TNNI3K PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 9.819e-18
Identity = 67/203 (33.00%), Postives = 106/203 (52.22%), Query Frame = 1
Query:   70 IIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHRE----FTAEMETLGKVKHQNLVPLLGYCSFGEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE-YGQSGRSTTRGDVYSFGVILLELVTGKEP 660
            IIG G FG VYK    + K VA+K+  +A T   +     F  E+  L ++ H  ++  +G C     +  +V +Y+  GSL   L  +     +L    +  IA   A+G+ +LH+  T  IIHRD+ + NILL E+  A VADFG +R + + +    T   G   ++ PE + Q  R T + DV+S+ + L E++TG+ P
Sbjct:  569 IIGSGSFGKVYKGRCRN-KIVAIKRY-RANTYCSKSDVDMFCREVSILCQLNHPCVIQFVGACLNDPSQFAIVTQYISGGSLFSLLHEQK---RILDLQSKLIIAVDVAKGMEYLHN-LTQPIIHRDLNSHNILLYEDGHAVVADFGESRFLQSLDEDNMTKQPGNLRWMAPEVFTQCTRYTIKADVFSYALCLWEILTGEIP 765          
BLAST of DY304885 vs. ExPASy Swiss-Prot
Match: MET_RAT (Hepatocyte growth factor receptor OS=Rattus norvegicus GN=Met PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 9.819e-18
Identity = 73/213 (34.27%), Postives = 111/213 (52.11%), Query Frame = 1
Query:   70 IIGDGGFGTVYKAAL--PDGKTV--AVKKLSQ-AKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 672
            +IG G FG VY   L   DGK +  AVK L++    +   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T +    +++G+  +       A+G+ +L    +   +HRD+ A N +L+E+F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1084 VIGRGHFGCVYHGTLLDSDGKKIHCAVKSLNRITDIEEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYL---VSKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1287          
BLAST of DY304885 vs. ExPASy Swiss-Prot
Match: LYN_HUMAN (Tyrosine-protein kinase Lyn OS=Homo sapiens GN=LYN PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 9.819e-18
Identity = 65/197 (32.99%), Postives = 98/197 (49.75%), Query Frame = 1
Query:   73 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 660
            +G G FG V+     +   VAVK L    T   + F  E   +  ++H  LV L    +  E   ++ EYM  GSL  +L++  G   +L   K    +   A G+A++      + IHRD++A+N+L++E    K+ADFGLAR+I   E            +  PE    G  T + DV+SFG++L E+VT GK P
Sbjct:  253 LGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIP 443          
BLAST of DY304885 vs. ExPASy Swiss-Prot
Match: LCK_CHICK (Proto-oncogene tyrosine-protein kinase LCK OS=Gallus gallus GN=LCK PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 9.819e-18
Identity = 73/213 (34.27%), Postives = 106/213 (49.77%), Query Frame = 1
Query:   73 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP----TGPE-FKDIEGG 693
            +G G FG V+         VA+K L Q  +     F AE   +  ++H  LV L    +  E   ++ EYM  GSL  +L+   G    L  +K   +A   A G+AF+      + IHRD++A+NIL++E    K+ADFGLARLI   E            +  PE    G  T + DV+SFG++L E+VT G+ P    T PE  +++E G
Sbjct:  250 LGAGQFGEVWMGFYNGHTKVAIKNLKQG-SMSPSAFLAEANLMKNLQHPRLVRLYAVVT-KEPIYIITEYMEKGSLVDFLKTSEGIK--LSINKLLDMAAQIAEGMAFIE---AKNYIHRDLRAANILVSEALCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERG 455          
BLAST of DY304885 vs. ExPASy Swiss-Prot
Match: EPHA3_RAT (Ephrin type-A receptor 3 OS=Rattus norvegicus GN=Epha3 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 9.819e-18
Identity = 70/217 (32.26%), Postives = 111/217 (51.15%), Query Frame = 1
Query:   37 LEATNNFCKTNIIGDGGFGTVY--KAALPDGK--TVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH-GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF--GYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 660
            L+ATN      ++G G FG V   +  LP  K  +VA+K L    T+  R +F  E   +G+  H N++ L G  +  +  ++V EYM NGSLD +LR       V+   +   +  G A G+ +L   G+    +HRD+ A NIL+N     KV+DFGL+R++        T   G     +  PE     + T+  DV+S+G++L E+++ G+ P
Sbjct:  617 LDATN-IAIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPVRWTSPEATAYRKFTSASDVWSYGIVLWEVMSYGERP 825          
BLAST of DY304885 vs. ExPASy Swiss-Prot
Match: CDC15_YEAST (Cell division control protein 15 OS=Saccharomyces cerevisiae GN=CDC15 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 9.819e-18
Identity = 62/199 (31.16%), Postives = 104/199 (52.26%), Query Frame = 1
Query:   70 IIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLD-LWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 660
            +IG G +G VYKA      + VA+K++     +   +  AE+  L  + H N+V   G+     E  ++ EY  NGSL  L  R+ TG  E    ++          GL +LH      +IHRDIKA+NILL+ +   K+ADFG++ ++++     +  +AGT  ++ PE   +  ++T  D++S G  ++E++T   P
Sbjct:   30 VIGRGSYGVVYKAINKHTDQVVAIKEVVYENDEELNDIMAEISLLKNLNHNNIVKYHGFIRKSYELYILLEYCANGSLRRLISRSSTGLSE----NESKTYVTQTLLGLKYLHG---EGVIHRDIKAANILLSADNTVKLADFGVSTIVNSS----ALTLAGTLNWMAPEILGNRGASTLSDIWSLGATVVEMLTKNPP 217          
BLAST of DY304885 vs. ExPASy Swiss-Prot
Match: Y5020_ARATH (Probable inactive receptor kinase At5g10020 OS=Arabidopsis thaliana GN=At5g10020 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.282e-17
Identity = 61/199 (30.65%), Postives = 103/199 (51.76%), Query Frame = 1
Query:   70 IIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC--SFGEEKLLVYEYMVNGSLDLWLRNRT-GSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE-EFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGR--STTRGDVYSFGVILLELVT 648
            ++G    GT+YKA L +G  + VK L     +  ++F  E + +G +KH N+VPL  Y      +E+LL+ +Y+   SL + L   T      + + +R K+A   A+ L +LH    P   H ++K +NI+L+  +   ++ D+ + RL++              GY  PE   + +   T + DVY+FGVIL+EL+T
Sbjct:  773 VLGRSSHGTLYKATLDNGHMLTVKWLRVGLVRHKKDFAREAKKIGSLKHPNIVPLRAYYWGPREQERLLLSDYLRGESLAMHLYETTPRRYSPMSFSQRLKVAVEVAQCLLYLHDRAMP---HGNLKPTNIILSSPDNTVRITDYCVHRLMTPSGVAEQILNMSALGYSAPELSSASKPIPTLKSDVYAFGVILMELLT 968          
BLAST of DY304885 vs. ExPASy Swiss-Prot
Match: SSP_ARATH (Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.282e-17
Identity = 61/220 (27.73%), Postives = 110/220 (50.00%), Query Frame = 1
Query:    1 EQPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKE 657
            + PL + +   +  ATN+F   NI+ D     V+K  L +G  VA+K+ +       + F  E + +GK++H+ LV L+GYC  G+++ LV ++M N +L   L  R    + + W  R ++A   A  L + +  GF     + ++ A  +L +E+ +A ++ FGL + I+  +         T G + PE            +Y FG +L+ L++GK+
Sbjct:   32 DPPLTKFSFSALKTATNHFSPENIVSDQTSDVVFKGRLQNGGFVAIKRFNNMAWSDPKLFLEEAQRVGKLRHKRLVNLIGYCCDGDKRFLVADFMANDTLAKRLFQR--KYQTMDWSIRLRVAYFVAEALDYCNTAGFAS---YNNLSAYKVLFDEDGDACLSCFGLMKEINNDQI--------TTGSVNPE----------NVIYRFGTVLVNLLSGKQ 228          
BLAST of DY304885 vs. ExPASy Swiss-Prot
Match: MET_SHEEP (Hepatocyte growth factor receptor OS=Ovis aries GN=MET PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.282e-17
Identity = 72/213 (33.80%), Postives = 108/213 (50.70%), Query Frame = 1
Query:   70 IIGDGGFGTVYKAALPDGKT----VAVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 672
            +IG G FG VY   L D        AVK L++    G   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T +    +++G+  +       A+G+ +L    +   +HRD+ A N +L+E+F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1084 VIGRGHFGCVYHGTLLDNDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMEYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1287          
BLAST of DY304885 vs. ExPASy Swiss-Prot
Match: MET_PIG (Hepatocyte growth factor receptor OS=Sus scrofa GN=MET PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.282e-17
Identity = 72/213 (33.80%), Postives = 108/213 (50.70%), Query Frame = 1
Query:   70 IIGDGGFGTVYKAALPDGKT----VAVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 672
            +IG G FG VY   L D        AVK L++    G   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T +    +++G+  +       A+G+ +L    +   +HRD+ A N +L+E+F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1083 VIGRGHFGCVYHGTLLDNDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1286          
The following BLAST results are available for this feature:
BLAST of DY304885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TNI3K_HUMAN9.819e-1833.00Serine/threonine-protein kinase TNNI3K OS=Homo sap... [more]
MET_RAT9.819e-1834.27Hepatocyte growth factor receptor OS=Rattus norveg... [more]
LYN_HUMAN9.819e-1832.99Tyrosine-protein kinase Lyn OS=Homo sapiens GN=LYN... [more]
LCK_CHICK9.819e-1834.27Proto-oncogene tyrosine-protein kinase LCK OS=Gall... [more]
EPHA3_RAT9.819e-1832.26Ephrin type-A receptor 3 OS=Rattus norvegicus GN=E... [more]
CDC15_YEAST9.819e-1831.16Cell division control protein 15 OS=Saccharomyces ... [more]
Y5020_ARATH1.282e-1730.65Probable inactive receptor kinase At5g10020 OS=Ara... [more]
SSP_ARATH1.282e-1727.73Probable inactive receptor-like kinase SSP OS=Arab... [more]
MET_SHEEP1.282e-1733.80Hepatocyte growth factor receptor OS=Ovis aries GN... [more]
MET_PIG1.282e-1733.80Hepatocyte growth factor receptor OS=Sus scrofa GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1AA05RM2 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304885 ID=DY304885; Name=DY304885; organism=Citrus clementina; type=EST; length=1224bp
GAGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAA
CAACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTAT
ACAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGC
CAGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCT
GGGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCAT
TTGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTG
GATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGA
TAAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTC
ATCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAAC
ATCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGC
TAGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCA
CATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACA
AGGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGG
AAAAGAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGG
TCGGTTTGGGTGTTTCAGAAGATGAAGAAGGGACAGGCTGCTGATGTTCT
AGATCCTACAGTCCTTACTGCAGATTCAAAGCCCATGATGCTTAAAATGC
TCCGGAATGCTGGTGATTGCCTCTCTGATAACCCTGCTATGAAGCCTACC
ATGCTGCATGTGTTGGAGTTTCTGAAAGAGATCCAAGTTGATTAAGTTTT
CTTTTGTTACTCCTGATAATAGAGCAAAAGATGAATACCTCTGTGAAGTT
AGTAGATTTACCTAGAAAGATAACCTGTAAAAATTACTTATTTTAATCCC
ATCAATAATTAAGCTTCAAAAAAAAAAAAAAAAAAAAAAATTCCAGGGGG
GGGCCCCGGTCCCCATTTCCCCCTCAATGGGATTCATATAAAAATTACTT
GGCCGCTCTTTTTTTTAAACCTCCCTGTGCGTGGGGAAAAAACACTCGCG
TTTTCCCCCACCAATAATTCCCTCCCTTCCACCCCCCCCTTCCCTCCCTT
TCTCCCCTCCGTTGCGGGCTGGTT
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