DY304885

Overview
NameDY304885
Unique NameDY304885
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1224
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304885 vs. ExPASy Swiss-Prot
Match: MET_MUNMU (Hepatocyte growth factor receptor OS=Muntiacus muntjak GN=MET PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.282e-17
Identity = 72/213 (33.80%), Postives = 108/213 (50.70%), Query Frame = 1
Query:   70 IIGDGGFGTVYKAALPDGKT----VAVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 672
            +IG G FG VY   L D        AVK L++    G   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T +    +++G+  +       A+G+ +L    +   +HRD+ A N +L+E+F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1084 VIGRGHFGCVYHGTLLDNDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMEYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1287          
BLAST of DY304885 vs. ExPASy Swiss-Prot
Match: MET_BOVIN (Hepatocyte growth factor receptor OS=Bos taurus GN=MET PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.282e-17
Identity = 72/213 (33.80%), Postives = 108/213 (50.70%), Query Frame = 1
Query:   70 IIGDGGFGTVYKAALPDGKT----VAVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 672
            +IG G FG VY   L D        AVK L++    G   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T +    +++G+  +       A+G+ +L    +   +HRD+ A N +L+E+F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1084 VIGRGHFGCVYHGTLLDNDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMEYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1287          
BLAST of DY304885 vs. ExPASy Swiss-Prot
Match: M313A_XENLA (Mitogen-activated protein kinase kinase kinase 13-A OS=Xenopus laevis GN=map3k13-A PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.282e-17
Identity = 65/216 (30.09%), Postives = 112/216 (51.85%), Query Frame = 1
Query:   73 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLR--NRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLV-GLG 711
            +G G  G V+      G+ VA+KK+ + K         +++ L K+KH N++   G C+      L+ EY  +G L   LR   +     ++ W        G A G+ +LH      IIHRD+K+ N+L+      K++DFG ++ +S   T +S   AGT  ++ PE  ++   + + D++SFGV+L EL+TG+ P    +KD++   ++ G+G
Sbjct:  175 LGSGAQGAVFLGKFR-GEEVAIKKVREQKE-------TDIKHLRKLKHPNIIAFKGVCTQAPCYCLIMEYCAHGQLYEVLRAGRKVSPRLLVDWSN------GIASGMNYLH---LHKIIHRDLKSPNVLVTHTDTVKISDFGTSKELSDKSTKMS--FAGTVAWMAPEVIRNEPVSEKVDIWSFGVLLWELLTGEIP----YKDVDSSAIIWGVG 367          
BLAST of DY304885 vs. ExPASy Swiss-Prot
Match: EPHB2_CHICK (Ephrin type-B receptor 2 OS=Gallus gallus GN=EPHB2 PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 1.282e-17
Identity = 68/208 (32.69%), Postives = 108/208 (51.92%), Query Frame = 1
Query:   70 IIGDGGFGTVYKAALP-DGKT---VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 660
            +IG G FG V    L   GK    VA+K L    T+  R +F +E   +G+  H N++ L G  +     +++ E+M NGSLD +LR   G   V+   +   +  G A G+ +L      + +HRD+ A NIL+N     KV+DFGL+R +   +T   T  +   G IP     PE  Q  + T+  DV+S+G+++ E+++ G+ P
Sbjct:  644 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSSPVMIITEFMENGSLDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED-DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 844          
BLAST of DY304885 vs. ExPASy Swiss-Prot
Match: MET_RHIFE (Hepatocyte growth factor receptor OS=Rhinolophus ferrumequinum GN=MET PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.675e-17
Identity = 72/213 (33.80%), Postives = 107/213 (50.23%), Query Frame = 1
Query:   70 IIGDGGFGTVYKAALPDGKT----VAVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 672
            +IG G FG VY   L D        AVK L++    G   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T +    +++G+  +       A+G+ +L    +   +HRD+ A N +L+E F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1083 VIGRGHFGCVYHGTLLDNDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYLA---SKKFVHRDLAARNCMLDENFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1286          
BLAST of DY304885 vs. ExPASy Swiss-Prot
Match: MET_MOUSE (Hepatocyte growth factor receptor OS=Mus musculus GN=Met PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.675e-17
Identity = 73/213 (34.27%), Postives = 111/213 (52.11%), Query Frame = 1
Query:   70 IIGDGGFGTVYKAAL--PDGKTV--AVKKLSQ-AKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 672
            +IG G FG VY   L   DGK +  AVK L++    +   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T +    +++G+  +       A+G+ +L    +   +HRD+ A N +L+E+F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1081 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIEEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1284          
BLAST of DY304885 vs. ExPASy Swiss-Prot
Match: MET_LOXAF (Hepatocyte growth factor receptor OS=Loxodonta africana GN=MET PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.675e-17
Identity = 72/213 (33.80%), Postives = 108/213 (50.70%), Query Frame = 1
Query:   70 IIGDGGFGTVYKAALPDGKT----VAVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 672
            +IG G FG VY   L D        AVK L++    G   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T +    +++G+  +       A+G+ +L    +   +HRD+ A N +L+E+F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1084 VIGRGHFGCVYHGTLLDNGDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1287          
BLAST of DY304885 vs. ExPASy Swiss-Prot
Match: EPHB2_MOUSE (Ephrin type-B receptor 2 OS=Mus musculus GN=Ephb2 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.675e-17
Identity = 68/208 (32.69%), Postives = 108/208 (51.92%), Query Frame = 1
Query:   70 IIGDGGFGTVYKAALP-DGKT---VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 660
            +IG G FG V    L   GK    VA+K L    T+  R +F +E   +G+  H N++ L G  +     +++ E+M NGSLD +LR   G   V+   +   +  G A G+ +L      + +HRD+ A NIL+N     KV+DFGL+R +   +T   T  +   G IP     PE  Q  + T+  DV+S+G+++ E+++ G+ P
Sbjct:  634 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED-DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 834          
BLAST of DY304885 vs. ExPASy Swiss-Prot
Match: EPHB2_HUMAN (Ephrin type-B receptor 2 OS=Homo sapiens GN=EPHB2 PE=1 SV=5)

HSP 1 Score: 90.8929 bits (224), Expect = 1.675e-17
Identity = 68/208 (32.69%), Postives = 108/208 (51.92%), Query Frame = 1
Query:   70 IIGDGGFGTVYKAALP-DGKT---VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 660
            +IG G FG V    L   GK    VA+K L    T+  R +F +E   +G+  H N++ L G  +     +++ E+M NGSLD +LR   G   V+   +   +  G A G+ +L      + +HRD+ A NIL+N     KV+DFGL+R +   +T   T  +   G IP     PE  Q  + T+  DV+S+G+++ E+++ G+ P
Sbjct:  626 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED-DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 826          
BLAST of DY304885 vs. ExPASy Swiss-Prot
Match: MET_NEONE (Hepatocyte growth factor receptor OS=Neofelis nebulosa GN=MET PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.187e-17
Identity = 72/213 (33.80%), Postives = 108/213 (50.70%), Query Frame = 1
Query:   70 IIGDGGFGTVYKAALPDGKT----VAVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 672
            +IG G FG VY   L D        AVK L++    G   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T +    +++G+  +       A+G+ +L    +   +HRD+ A N +L+E+F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1084 VIGRGHFGCVYHGTLLDSDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1287          
The following BLAST results are available for this feature:
BLAST of DY304885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MET_MUNMU1.282e-1733.80Hepatocyte growth factor receptor OS=Muntiacus mun... [more]
MET_BOVIN1.282e-1733.80Hepatocyte growth factor receptor OS=Bos taurus GN... [more]
M313A_XENLA1.282e-1730.09Mitogen-activated protein kinase kinase kinase 13-... [more]
EPHB2_CHICK1.282e-1732.69Ephrin type-B receptor 2 OS=Gallus gallus GN=EPHB2... [more]
MET_RHIFE1.675e-1733.80Hepatocyte growth factor receptor OS=Rhinolophus f... [more]
MET_MOUSE1.675e-1734.27Hepatocyte growth factor receptor OS=Mus musculus ... [more]
MET_LOXAF1.675e-1733.80Hepatocyte growth factor receptor OS=Loxodonta afr... [more]
EPHB2_MOUSE1.675e-1732.69Ephrin type-B receptor 2 OS=Mus musculus GN=Ephb2 ... [more]
EPHB2_HUMAN1.675e-1732.69Ephrin type-B receptor 2 OS=Homo sapiens GN=EPHB2 ... [more]
MET_NEONE2.187e-1733.80Hepatocyte growth factor receptor OS=Neofelis nebu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1AA05RM2 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304885 ID=DY304885; Name=DY304885; organism=Citrus clementina; type=EST; length=1224bp
GAGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAA
CAACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTAT
ACAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGC
CAGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCT
GGGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCAT
TTGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTG
GATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGA
TAAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTC
ATCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAAC
ATCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGC
TAGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCA
CATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACA
AGGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGG
AAAAGAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGG
TCGGTTTGGGTGTTTCAGAAGATGAAGAAGGGACAGGCTGCTGATGTTCT
AGATCCTACAGTCCTTACTGCAGATTCAAAGCCCATGATGCTTAAAATGC
TCCGGAATGCTGGTGATTGCCTCTCTGATAACCCTGCTATGAAGCCTACC
ATGCTGCATGTGTTGGAGTTTCTGAAAGAGATCCAAGTTGATTAAGTTTT
CTTTTGTTACTCCTGATAATAGAGCAAAAGATGAATACCTCTGTGAAGTT
AGTAGATTTACCTAGAAAGATAACCTGTAAAAATTACTTATTTTAATCCC
ATCAATAATTAAGCTTCAAAAAAAAAAAAAAAAAAAAAAATTCCAGGGGG
GGGCCCCGGTCCCCATTTCCCCCTCAATGGGATTCATATAAAAATTACTT
GGCCGCTCTTTTTTTTAAACCTCCCTGTGCGTGGGGAAAAAACACTCGCG
TTTTCCCCCACCAATAATTCCCTCCCTTCCACCCCCCCCTTCCCTCCCTT
TCTCCCCTCCGTTGCGGGCTGGTT
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