DY304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY304892 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 5.587e-27 Identity = 86/257 (33.46%), Postives = 120/257 (46.69%), Query Frame = 1 Query: 106 CGSGVVCGERDTGHGTD----GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPS-PYC---NLNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIRP 846 CG+G G + GT GG +G I+++ F ++ C + FYT D+FI AA FP F NS + REIA FA HET +C+I EI+ S YC N YPC GK Y+GRGPIQL+WNYNY C +++P ++F++ +WFWM + +P N G+G T IN G+EC G + AV RI ++ +CG+ G+ P Sbjct: 48 CGTGCRSGPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGG-GCAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHET-------------GHFCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGAC--GQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSV--------------RPVLNQ-------GFGATIRAIN-GMECNGGNSGAVNARIRYYRDYCGQLGVDP 262
BLAST of DY304892 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 8.068e-26 Identity = 83/249 (33.33%), Postives = 117/249 (46.99%), Query Frame = 1 Query: 106 CGSGVVCGER-DTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGWNDA-VRNRIGFFSTFCGKFGIRP 846 CG G G D G + I+++E F D + + CP + FYT F+EA A+P FG + R REIAA+FA HET +A YC S+ P CN N +Y+GRGP+QL+WNYNY+ DP++SFK+++WFW+ + VI D P+ G+G T IINGG EC G N A + R+G++ +C + G+ P Sbjct: 25 CGPGCQAGPCWDPCEGDGTLTVSDIVTQE-FWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHETGHLCYIEERDGHANNYCQESQQYP----CNPN----KEYFGRGPMQLSWNYNYI--DAGKELHFDGLNDPDIVGRDPIISFKTSLWFWI-----RKGVQYVILD---PN---------QGFGATIRIINGGQEC-DGHNTAQMMARVGYYQEYCAQLGVSP 244
BLAST of DY304892 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.376e-25 Identity = 82/262 (31.30%), Postives = 113/262 (43.13%), Query Frame = 1 Query: 106 CGSGVVCGERDTGHGTDGGELG---------KIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPS-PYCNLN---YPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIRP 846 C SG G G G GG G + + E F + + + C + FYT +F+ AA ++ F REIAAFFA HET C+I+EI+ S YC+ N +PC+ KYYGRGP+Q++WNYNY A DP +SFK+A+WFWM N+V L G+G T ING +EC AV R+ ++ +C +FG+ P Sbjct: 57 CRSGPCYGGGGGGGGGGGGGGGGGGGSGVSVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNY--GPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWM---------------------NNVHQVMLQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVDP 282
BLAST of DY304892 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 6.830e-25 Identity = 69/212 (32.55%), Postives = 100/212 (47.17%), Query Frame = 1 Query: 229 CPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPS-PYC---NLNYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIRP 846 C + FYT +F+ AA+++ F N REIAAFFA HET C+I+EI+ + YC N +PC+ KYYGRGP+Q++WN+NY A DP +SFK+A+WFWM + H+V++ G+G T ING +EC AV R+ ++ +C +FG+ P Sbjct: 104 CAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNY--GPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMN------NVHQVMSQ---------------GFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSP 279
BLAST of DY304892 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.860e-22 Identity = 75/252 (29.76%), Postives = 109/252 (43.25%), Query Frame = 1 Query: 106 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPS-PYCN----LNYPCRGK--YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGI 840 CG+G G T + I F + + + D C + FYT DAF+ A ++ FG G+E REIAA FA HET +C+I EI S YC+ YPC Y+GRGPIQL+WN+NY + D V+SFK+A+W+WM Q +P ++ G+G T ING +EC V+ R+ +++ +C + G+ Sbjct: 47 CGTGCQQGPCTTASPPPSNNVNADILTADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHET-------------GHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNY--GPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM--QHVRPVINQ-------------------GFGATIRAINGALECDGANPTTVQARVNYYTEYCRQLGV 262
BLAST of DY304892 vs. ExPASy Swiss-Prot
Match: CHI4_ARAHY (Endochitinase 4 (Fragment) OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 5.077e-12 Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 1 Query: 631 MTAQPPKPSCHEVITDEWKPSANDVXAGRLPGYGLTTNIINGGIEC 768 MT Q KPSCH+VIT+ W+P+A D AGR PGYG+ TNIINGG++C Sbjct: 1 MTPQGNKPSCHDVITNAWRPTATDSAAGRAPGYGVITNIINGGLDC 46 The following BLAST results are available for this feature:
BLAST of DY304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304892 ID=DY304892; Name=DY304892; organism=Citrus clementina; type=EST; length=1067bpback to top |