DY304893

Overview
NameDY304893
Unique NameDY304893
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1269
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY304893_ssr138 microsatellite DY304893_ssr138:138..149. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY304893 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 8.114e-18
Identity = 33/95 (34.74%), Postives = 51/95 (53.68%), Query Frame = -1
Query:  676 IFGGHITPACDIRTVLGRKVSLIELLLYMVAQCXGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSA 960
            + GGH+ PA  +  ++G ++SL+  + Y+VAQ  GAI G   +      Y  R     N L +    G  + AE+I TF L   VFS+TD +R++
Sbjct:   63 VSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGL-APYNARSNLAVNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTS 156          

HSP 2 Score: 51.9878 bits (123), Expect = 8.114e-18
Identity = 24/48 (50.00%), Postives = 32/48 (66.67%), Query Frame = -3
Query:  449 TGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 592
            TG  +NPARSFG AVI ++  +    W+FWVGP +GA  AA  + Y+L
Sbjct:  180 TGCSMNPARSFGPAVIMSRFSS--AHWVFWVGPIVGAATAAIIYFYLL 225          
BLAST of DY304893 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 8.125e-18
Identity = 24/50 (48.00%), Postives = 35/50 (70.00%), Query Frame = -3
Query:  446 ITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILR 595
            +TG  +NPARSFG AV+ N    W D W++WVGP +GA VAA  ++++ +
Sbjct:  192 LTGASMNPARSFGPAVVQNM---WIDHWVYWVGPIVGAIVAALLYKFVFK 238          

HSP 2 Score: 50.8322 bits (120), Expect = 8.125e-18
Identity = 30/106 (28.30%), Postives = 49/106 (46.23%), Query Frame = -1
Query:  643 IFGGHITPACDIRTVLGRKVSLIELLLYMVAQCXGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPL 960
            I G HI PA  +  ++  ++S+I+ +LY+  QC GAI G   +K       +    G +  +     G  +  E + TF+LV  V   +DP R+      P+   L
Sbjct:   75 ISGCHINPAVTVGFLIVGEMSIIKSVLYIAVQCVGAIAGAAVIKVGVSEAVSGLDLGVSSFSSTLTVGQAVLIEALITFILVVVVKGVSDPGRTDIKGSAPLAVGL 180          
BLAST of DY304893 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 1.783e-17
Identity = 31/96 (32.29%), Postives = 52/96 (54.17%), Query Frame = -1
Query:  676 IFGGHITPACDIRTVLGRKVSLIELLLYMVAQCXGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSA 960
            + GGHI PA  +  ++G ++SL+    Y+ AQ  GAI G G +  +  +  N  G    N L +   +G  +  E+I TF L   +F++TD +R++
Sbjct:   63 VSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGIL--YGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS 156          

HSP 2 Score: 53.5286 bits (127), Expect = 1.783e-17
Identity = 24/48 (50.00%), Postives = 32/48 (66.67%), Query Frame = -3
Query:  449 TGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 592
            TG  +NPARSFG AV+ N+       W+FWVGP +GA +AA  + Y+L
Sbjct:  180 TGCSMNPARSFGPAVVMNRFSP--AHWVFWVGPIVGAVLAAILYFYLL 225          
BLAST of DY304893 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 5.102e-17
Identity = 39/112 (34.82%), Postives = 58/112 (51.79%), Query Frame = -1
Query:  643 AGIFGGHITPACDIRTVLGRKVSLIELLLYMVAQCXGAICGCGFVKAFQKSYYNRYGG---GANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPL 966
            A I GGH+ PA      +G  +SL++ ++Y VAQ  G++  C  +K          GG   GA  L+ G      +  EI+ TF LVYTV+ +A DPK+      + V+AP+
Sbjct:   77 ANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKI-------ATGGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKK----GDLGVIAPI 177          

HSP 2 Score: 51.9878 bits (123), Expect = 5.102e-17
Identity = 21/46 (45.65%), Postives = 30/46 (65.22%), Query Frame = -3
Query:  452 GTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYI 589
            G  +NPA SFG AV+      WD+ W++W+GPF+GA +AA  +  I
Sbjct:  195 GASMNPAVSFGPAVVTG---VWDNHWVYWLGPFVGAAIAALIYDII 237          
BLAST of DY304893 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 1.894e-16
Identity = 38/134 (28.36%), Postives = 58/134 (43.28%), Query Frame = -1
Query:  580 LVYCTAGIFGGHITPACDIRTVLGRKVSLIELLLYMVAQCXGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPHWVCCVHGSLGHHPPSPEPA 981
            +V C   + G HI PA     ++   +S+++ + Y++ QC GAI G   +K    + + R       LA G     G   E   TFVL+  V S  D +R    +  PV   L    CC   ++ +   S  PA
Sbjct:   72 MVQCIGHVSGCHINPAVTCGLLVTGHISILKAIFYIIVQCVGAIAGSAILKVITPAEF-RGTLCMTSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRRKNLGNAAPVAVGLA-ITCCHLAAIKYTGSSMNPA 203          

HSP 2 Score: 52.7582 bits (125), Expect = 1.894e-16
Identity = 22/50 (44.00%), Postives = 32/50 (64.00%), Query Frame = -3
Query:  443 TGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRA 592
            TG+ +NPARSFG AV  N +  W + W++W GP +G  VA   ++ + RA
Sbjct:  196 TGSSMNPARSFGPAV--NGDDNWANHWVYWAGPIVGGVVAGITYRALFRA 243          
BLAST of DY304893 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 53.1434 bits (126), Expect = 3.202e-16
Identity = 33/103 (32.04%), Postives = 51/103 (49.51%), Query Frame = -1
Query:  655 IFGGHITPACDIRTVLGRKVSLIELLLYMVAQCXGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPV 960
            + G HI PA  I  ++   +S+++   Y+V+QC GAI G   +KA   S  +  GG G   +      G G+  E + TF+LV+ V    D +RS      P+
Sbjct:   76 VSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPS--DVIGGLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVCDNRRSDIKGSAPL 176          

HSP 2 Score: 53.1434 bits (126), Expect = 3.202e-16
Identity = 21/49 (42.86%), Postives = 30/49 (61.22%), Query Frame = -3
Query:  446 TGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILR 592
            TG  +NPARSFG AV+      W DQW++WVGP +G  +A   ++   +
Sbjct:  193 TGASMNPARSFGPAVVMGN---WTDQWVYWVGPIVGGILAGAVYRLFFK 238          
BLAST of DY304893 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 4.161e-16
Identity = 35/109 (32.11%), Postives = 54/109 (49.54%), Query Frame = -1
Query:  643 AGIFGGHITPACDIRTVLGRKVSLIELLLYMVAQCXGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPL 966
            A + GGH+ PA      +G  ++L+  +LY +AQ  GA+  C  +K             A  L+ G      +  EI+ TF LVYTV+ +A DPK+      + ++APL
Sbjct:   77 ANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKVSTGGMET----AAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKK----GDIGIIAPL 177          

HSP 2 Score: 49.6766 bits (117), Expect = 4.161e-16
Identity = 22/46 (47.83%), Postives = 29/46 (63.04%), Query Frame = -3
Query:  452 GTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYI 589
            G  +NPA SFG AV+      W + W++WVGPFIGA +AA  +  I
Sbjct:  195 GASMNPAVSFGPAVV---SWIWTNHWVYWVGPFIGAAIAAIVYDTI 237          
BLAST of DY304893 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 56.6102 bits (135), Expect = 9.140e-16
Identity = 35/103 (33.98%), Postives = 53/103 (51.46%), Query Frame = -1
Query:  655 IFGGHITPACDIRTVLGRKVSLIELLLYMVAQCXGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPV 960
            + G HI PA  I  ++   VS+++   Y+V+QC GAI G   +KA   S     GG G   +A G + G G+  E + TF+LV+ V    D +R+      P+
Sbjct:   75 VSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPS--EVVGGLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVCDNRRTDVKGSAPL 175          

HSP 2 Score: 48.1358 bits (113), Expect = 9.140e-16
Identity = 20/49 (40.82%), Postives = 29/49 (59.18%), Query Frame = -3
Query:  446 TGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILR 592
            TG  +NPARSFG AV+      + D W++WVGP +G  VA   ++   +
Sbjct:  192 TGASMNPARSFGPAVVMGN---YTDLWVYWVGPIVGGIVAGAVYRLFFK 237          
BLAST of DY304893 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.187e-15
Identity = 39/112 (34.82%), Postives = 58/112 (51.79%), Query Frame = -1
Query:  643 AGIFGGHITPACDIRTVLGRKVSLIELLLYMVAQCXGAICGCGFVKAFQKSYYNRYGG---GANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPL 966
            A I GGH+ PA      +G  +SL++ L+Y VAQ  G++  C  +K          GG   GA  L+ G      +  E++ TF LVYTV+ +A DPK+      + V+AP+
Sbjct:   77 ANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKI-------ATGGAALGAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKK----GDLGVIAPI 177          

HSP 2 Score: 47.7506 bits (112), Expect = 1.187e-15
Identity = 20/46 (43.48%), Postives = 28/46 (60.87%), Query Frame = -3
Query:  452 GTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYI 589
            G  +NPA SFG AV+      W++ W++WVGP  GA +AA  +  I
Sbjct:  195 GASMNPAVSFGPAVVTG---VWENHWVYWVGPLAGAAIAALVYDII 237          
BLAST of DY304893 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 1.188e-15
Identity = 21/48 (43.75%), Postives = 31/48 (64.58%), Query Frame = -3
Query:  449 TGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 592
            +G  +NPARSFG A++      W D W++WVGP IG  +A F ++ +L
Sbjct:  188 SGASMNPARSFGPALVSGN---WTDHWVYWVGPLIGGGLAGFIYENVL 232          

HSP 2 Score: 51.9878 bits (123), Expect = 1.188e-15
Identity = 38/112 (33.93%), Postives = 56/112 (50.00%), Query Frame = -1
Query:  652 VYCTAG-IFGGHITPACDIRTVLGRKVSLIELLLYMVAQCXGAICGCGFVKAFQKSYYNR-YGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVL 978
            V  +AG I GGH+ PA  +  +LG  +S+    LY + Q   +   C     F  SY     G   + LA G +   G+  EII TF L++TV++   DPK+ + D   P+L
Sbjct:   66 VMISAGHISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAAC-----FLLSYLTGGMGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLL 172          
The following BLAST results are available for this feature:
BLAST of DY304893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
AQP5_SHEEP8.114e-1834.74Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
AQP_HAEIX8.125e-1848.00Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
AQP5_HUMAN1.783e-1732.29Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
TIP12_ORYSJ5.102e-1734.82Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
AQP_CICVR1.894e-1628.36Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
AQP_AEDAE3.202e-1632.04Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
TIP13_ARATH4.161e-1632.11Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
AQP_ANOGA9.140e-1633.98Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
TIP12_MAIZE1.187e-1534.82Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
TIP41_ARATH1.188e-1543.75Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1AB12RM2 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304893 ID=DY304893; Name=DY304893; organism=Citrus clementina; type=EST; length=1269bp
GTTTTTTTTTACAAAAAGGTCATAGTTTTATTCACTAGAGTTGGGGATTA
ATTAACATTAACAACATAAATACACCACTTGAAATAAAGAAAAAGGAAAG
GATAAGAAAAATATAGAGAAATAGGATATATAAAAAACACCACCACCACT
TATAAACACACCCAAAGAAAAAAATTAAAATGGGATACCAAAATCCACCC
TTACACATAGATAAAGCATAGGCATAAAATGCATAATGTTCAAATATCTA
CAATTCAATAGCCCTCTAATTCAGCTCAAATTCAATGGCCCTCTAAAGAG
CTTGAAAAGAGATTTCTTAAAGGGCCTTCGTAACAGACTTGCACTCCTGA
TCATGCTGTAAATTTTTCACCTTGGAAGCACCAGACATCATATTTAAAGC
TTAAGCATTGCTCCTGAAGGATCCAAGAGCCTTAATGGCTGCTGCCCTGA
GAATGTATTGGTGGTAGAATGCAGCAACGAAAGCTCCAATGAATGGTCCA
ACCCAGAAGATCCATTGGTCATCCCAGGCTTTCTCCTTGTTGTAGATCAC
AGCAGCTCCAAAACTCCTAGCTGGGTTGATGCCGGTTCCGGTGATGGGGG
ATGGTGGCCAAGTGAACCATGAACACAGCAAACCCAATGGGGGAGTGGTG
CCAAGACCGGAACATGGGAGTCTCTTGCGCTCCTCTTAGGATCAGTGGCA
GAGAAAACAGTGTAGACAAGAACGAAAGTACCGATGATCTCAGCACCCAG
TCCGGTGCCCTTGTTGTATCCATCAGCTAGCTCATTGGCCCCACCTCCAT
ACCTGTTGTAGTATGATTTTTGGAAAGCCTTCACAAACCCACAACCACAG
ATTGCACCCNAGCACTGTGCTACCATGTACAAAAGAAGCTCGATGAGCGA
CACCTTGCGCCCCAGAACAGTCCGAATGTCACAAGCGGGGGTGATATGTC
CACCAAAAATACCGGCTGTGCAGTAAACGAGAAATGGAGATCCTGGCACC
CAAAGGCCCAAAGCAATGCCCAAAAATGCCAACGCCCCCCACCGGATTTG
GGTATTTAAAATTTGGGTTCCGGTCTGGGCCCTTTTTATTCCCATCCCCG
AAACACAAAGGGGTGAACAAAAAAAAAAAAAAAAAACGCTAGACAGAATA
AAACACCCCCATATTACCCTCCTTCTTTTAAAAAAAAACCCCCCCCTTCG
CCCCCTCCCCTCCCCCCATAAATACTTTTTATCCACGCCCGCCCCCGCGC
CGGAGGGAGGGGGGGGGGG
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